RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	AZR1	P50080	613 aa		5.72	□□□□□ -1.49
RCL1	YOL010W	SUT1	P53032	299 aa	Known RBP	5.72	□□□□□ -1.49
RCL1	YOL010W	MET13	P53128	600 aa		5.72	□□□□□ -1.49
RCL1	YOL010W	YOR059C	Q08448	450 aa	Known RBP	5.72	□□□□□ -1.49
RCL1	YOL010W	SAM1	P10659	382 aa	Known RBP	5.71	□□□□□ -1.5
RCL1	YOL010W	RAD18	P10862	487 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	POL3	P15436	1097 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	MCM4	P30665	933 aa	Known RBP	5.71	□□□□□ -1.5
RCL1	YOL010W	RAD24	P32641	659 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	DUR3	P33413	735 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	YTA12	P40341	825 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	DOT1	Q04089	582 aa	Known RBP	5.71	□□□□□ -1.5
RCL1	YOL010W	LCD1	Q04377	747 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	ISA1	Q07821	250 aa	Predicted RBP	5.71	□□□□□ -1.5
RCL1	YOL010W	IRC10	Q08118	586 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	NOP8	Q08287	484 aa	Predicted RBP	5.71	□□□□□ -1.5
RCL1	YOL010W	TRM11	Q12463	433 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	IRA2	P19158	3079 aa		5.71	□□□□□ -1.5
RCL1	YOL010W	PIF1	P07271	859 aa		5.7	□□□□□ -1.5
RCL1	YOL010W	SRM1	P21827	482 aa		5.7	□□□□□ -1.5
RCL1	YOL010W	SHP1	P34223	423 aa		5.7	□□□□□ -1.5
RCL1	YOL010W	LEO1	P38439	464 aa		5.7	□□□□□ -1.5
RCL1	YOL010W	NTA1	P40354	457 aa		5.7	□□□□□ -1.5
RCL1	YOL010W	YNL193W	P53870	558 aa		5.7	□□□□□ -1.5
RCL1	YOL010W	ECM16	Q04217	1267 aa	Known RBP	5.7	□□□□□ -1.5
RCL1	YOL010W	ERP3	Q12403	225 aa		5.7	□□□□□ -1.5
RCL1	YOL010W	CYB2	P00175	591 aa		5.69	□□□□□ -1.5
RCL1	YOL010W	SNA3	P14359	133 aa		5.69	□□□□□ -1.5
RCL1	YOL010W	TFC4	P33339	1025 aa		5.69	□□□□□ -1.5
RCL1	YOL010W	GRX7	P38068	203 aa		5.69	□□□□□ -1.5
RCL1	YOL010W	FLR1	P38124	548 aa		5.69	□□□□□ -1.5
RCL1	YOL010W	SOL4	P53315	255 aa		5.69	□□□□□ -1.5
RCL1	YOL010W	PUF6	Q04373	656 aa	Known RBP	5.69	□□□□□ -1.5
RCL1	YOL010W	YMR321C	Q04898	105 aa		5.69	□□□□□ -1.5
RCL1	YOL010W	PYC2	P32327	1180 aa	Known RBP	5.68	□□□□□ -1.5
RCL1	YOL010W	RAD55	P38953	406 aa		5.68	□□□□□ -1.5
RCL1	YOL010W	TVP23	P38962	199 aa		5.68	□□□□□ -1.5
RCL1	YOL010W	POL32	P47110	350 aa		5.68	□□□□□ -1.5
RCL1	YOL010W	MSH6	Q03834	1242 aa		5.68	□□□□□ -1.5
RCL1	YOL010W	MYO1	P08964	1928 aa		5.68	□□□□□ -1.5
RCL1	YOL010W	MOT1	P32333	1867 aa		5.67	□□□□□ -1.5
RCL1	YOL010W	MAS2	P11914	482 aa		5.67	□□□□□ -1.5
RCL1	YOL010W	PRP6	P19735	899 aa	Predicted RBP	5.67	□□□□□ -1.5
RCL1	YOL010W	DBP7	P36120	742 aa	Known RBP	5.67	□□□□□ -1.5
RCL1	YOL010W	PHO88	P38264	188 aa	Predicted RBP	5.67	□□□□□ -1.5
RCL1	YOL010W	ALD5	P40047	520 aa	Known RBP	5.67	□□□□□ -1.5
RCL1	YOL010W	HEF3	P53978	1044 aa	Known RBP	5.67	□□□□□ -1.5
RCL1	YOL010W	SKY1	Q03656	742 aa		5.67	□□□□□ -1.5
RCL1	YOL010W	DUS3	Q06053	668 aa	Known RBP	5.67	□□□□□ -1.5
RCL1	YOL010W	RPN7	Q06103	429 aa	Known RBP	5.67	□□□□□ -1.5
RCL1	YOL010W	HDA2	Q06629	674 aa		5.67	□□□□□ -1.5
RCL1	YOL010W	YPL260W	Q08977	551 aa		5.67	□□□□□ -1.5
RCL1	YOL010W	IMG2	P25642	146 aa	Predicted RBP	5.66	□□□□□ -1.5
RCL1	YOL010W	TGL1	P34163	548 aa		5.66	□□□□□ -1.5
RCL1	YOL010W	STB5	P38699	743 aa		5.66	□□□□□ -1.5
RCL1	YOL010W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
RCL1	YOL010W	SSY1	Q03770	852 aa		5.66	□□□□□ -1.5
RCL1	YOL010W	SKG3	Q06315	1026 aa		5.66	□□□□□ -1.5
RCL1	YOL010W	FMP27	Q06179	2628 aa		5.66	□□□□□ -1.5
RCL1	YOL010W	RPS4A	P0CX35	261 aa	Known RBP	5.65	□□□□□ -1.5
RCL1	YOL010W	RPS4B	P0CX36	261 aa	Known RBP	5.65	□□□□□ -1.5
RCL1	YOL010W	SAM2	P19358	384 aa	Known RBP	5.65	□□□□□ -1.5
RCL1	YOL010W	TKL1	P23254	680 aa	Known RBP	5.65	□□□□□ -1.5
RCL1	YOL010W	REG2	P38232	338 aa		5.65	□□□□□ -1.5
RCL1	YOL010W	PSY2	P40164	858 aa		5.65	□□□□□ -1.5
RCL1	YOL010W	FAF1	P40546	346 aa	Predicted RBP	5.65	□□□□□ -1.5
RCL1	YOL010W	YRB30	P53107	440 aa	Predicted RBP	5.65	□□□□□ -1.5
RCL1	YOL010W	MSC2	Q03455	724 aa		5.65	□□□□□ -1.5
RCL1	YOL010W	TMA64	Q04600	565 aa	Known RBP	5.65	□□□□□ -1.5
RCL1	YOL010W	SPH1	Q06160	661 aa		5.65	□□□□□ -1.5
RCL1	YOL010W	ESF1	Q06344	628 aa	Known RBP	5.65	□□□□□ -1.5
RCL1	YOL010W	GUD1	Q07729	489 aa		5.65	□□□□□ -1.5
RCL1	YOL010W	ATG11	Q12527	1178 aa		5.65	□□□□□ -1.5
RCL1	YOL010W	RPB10	P22139	70 aa		5.64	□□□□□ -1.51
RCL1	YOL010W	MBR1	P23493	339 aa		5.64	□□□□□ -1.51
RCL1	YOL010W	PUP1	P25043	261 aa		5.64	□□□□□ -1.51
RCL1	YOL010W	CHS3	P29465	1165 aa		5.64	□□□□□ -1.51
RCL1	YOL010W	SEC8	P32855	1065 aa		5.64	□□□□□ -1.51
RCL1	YOL010W	MCR1	P36060	302 aa	Known RBP	5.64	□□□□□ -1.51
RCL1	YOL010W	IRS4	P36115	615 aa	Known RBP	5.64	□□□□□ -1.51
RCL1	YOL010W	AIM3	P38266	947 aa	Known RBP	5.64	□□□□□ -1.51
RCL1	YOL010W	PNG1	Q02890	363 aa		5.64	□□□□□ -1.51
RCL1	YOL010W	YLL054C	Q12244	843 aa		5.64	□□□□□ -1.51
RCL1	YOL010W	PRC1	P00729	532 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	MSD1	P15179	658 aa	Known RBP	5.63	□□□□□ -1.51
RCL1	YOL010W	BET2	P20133	325 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	FUB1	P25659	250 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	OPT1	P40897	799 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	ORC3	P54790	616 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	PIG1	Q06216	648 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	MMR1	Q06324	491 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	TRE1	Q08919	783 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	APC11	Q12157	165 aa		5.63	□□□□□ -1.51
RCL1	YOL010W	FKS1	P38631	1876 aa	Known RBP	5.62	□□□□□ -1.51
RCL1	YOL010W	SMY2	P32909	740 aa	Known RBP	5.62	□□□□□ -1.51
RCL1	YOL010W	MFB1	Q04922	465 aa		5.62	□□□□□ -1.51
RCL1	YOL010W	SGO1	Q08490	590 aa		5.62	□□□□□ -1.51
RCL1	YOL010W	RKM4	Q12504	494 aa		5.62	□□□□□ -1.51
RCL1	YOL010W	TRP2	P00899	507 aa	Known RBP	5.61	□□□□□ -1.51
RCL1	YOL010W	ARP1	P38696	384 aa		5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 81.9 ms