RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C CKB2P38930 258 aa4.34□□□□□ -1.71
WHI3YNL197C NIT1P40447 199 aa4.34□□□□□ -1.71
WHI3YNL197C REH1Q06709 432 aa4.34□□□□□ -1.71
WHI3YNL197C NBA1Q08229 501 aaKnown RBP4.34□□□□□ -1.71
WHI3YNL197C MCA1Q08601 432 aa4.34□□□□□ -1.71
WHI3YNL197C OSW2Q12202 724 aa4.34□□□□□ -1.71
WHI3YNL197C CCR4P31384 837 aaKnown RBP4.34□□□□□ -1.71
WHI3YNL197C PRP19P32523 503 aaKnown RBP4.34□□□□□ -1.71
WHI3YNL197C YMR187CQ03236 431 aa4.34□□□□□ -1.71
WHI3YNL197C MSC2Q03455 724 aa4.34□□□□□ -1.71
WHI3YNL197C SIZ1Q04195 904 aa4.34□□□□□ -1.71
WHI3YNL197C YPR196WQ06595 470 aa4.34□□□□□ -1.71
WHI3YNL197C GUD1Q07729 489 aa4.34□□□□□ -1.71
WHI3YNL197C RSB1Q08417 382 aa4.34□□□□□ -1.71
WHI3YNL197C GIN4Q12263 1142 aa4.34□□□□□ -1.71
WHI3YNL197C GCD1P09032 578 aaPredicted RBP4.33□□□□□ -1.72
WHI3YNL197C PLC1P32383 869 aa4.33□□□□□ -1.72
WHI3YNL197C SEC6P32844 805 aa4.33□□□□□ -1.72
WHI3YNL197C AIM26P32858 118 aa4.33□□□□□ -1.72
WHI3YNL197C PTC7P38797 343 aa4.33□□□□□ -1.72
WHI3YNL197C OAF1P39720 1047 aaPredicted RBP4.33□□□□□ -1.72
WHI3YNL197C NOG2P53742 486 aaKnown RBP4.33□□□□□ -1.72
WHI3YNL197C SND1Q04007 877 aa4.33□□□□□ -1.72
WHI3YNL197C NHX1Q04121 633 aa4.33□□□□□ -1.72
WHI3YNL197C YOR378WQ08902 515 aa4.33□□□□□ -1.72
WHI3YNL197C YLR122CQ12312 125 aa4.33□□□□□ -1.72
WHI3YNL197C NOT3P06102 836 aaKnown RBP4.33□□□□□ -1.72
WHI3YNL197C STE13P33894 931 aa4.33□□□□□ -1.72
WHI3YNL197C RFC5P38251 354 aa4.33□□□□□ -1.72
WHI3YNL197C RLP7P40693 322 aaKnown RBP4.33□□□□□ -1.72
WHI3YNL197C YNL034WP53963 612 aa4.33□□□□□ -1.72
WHI3YNL197C YNL018CP53976 612 aa4.33□□□□□ -1.72
WHI3YNL197C CDA1Q06702 301 aa4.33□□□□□ -1.72
WHI3YNL197C RPD3P32561 433 aa4.32□□□□□ -1.72
WHI3YNL197C GTS1P40956 396 aa4.32□□□□□ -1.72
WHI3YNL197C NOP2P40991 618 aaKnown RBP4.32□□□□□ -1.72
WHI3YNL197C GZF3P42944 551 aaKnown RBP4.32□□□□□ -1.72
WHI3YNL197C ALY2P47029 1046 aa4.32□□□□□ -1.72
WHI3YNL197C UBC9P50623 157 aaPredicted RBP4.32□□□□□ -1.72
WHI3YNL197C PEX14P53112 341 aa4.32□□□□□ -1.72
WHI3YNL197C SSY1Q03770 852 aa4.32□□□□□ -1.72
WHI3YNL197C THI21Q08975 551 aa4.32□□□□□ -1.72
WHI3YNL197C YTM1Q12024 460 aaPredicted RBP4.32□□□□□ -1.72
WHI3YNL197C LPX1Q12405 387 aaKnown RBP4.32□□□□□ -1.72
WHI3YNL197C SPS1P08458 490 aa4.31□□□□□ -1.72
WHI3YNL197C FBP1P09201 348 aa4.31□□□□□ -1.72
WHI3YNL197C CHS2P14180 963 aa4.31□□□□□ -1.72
WHI3YNL197C MSB1P21339 1137 aaKnown RBP4.31□□□□□ -1.72
WHI3YNL197C TAT1P38085 619 aa4.31□□□□□ -1.72
WHI3YNL197C PMC1P38929 1173 aaPredicted RBP4.31□□□□□ -1.72
WHI3YNL197C CCT5P40413 562 aaKnown RBP4.31□□□□□ -1.72
WHI3YNL197C CEP3P40969 608 aa4.31□□□□□ -1.72
WHI3YNL197C RAI1P53063 387 aaKnown RBP4.31□□□□□ -1.72
WHI3YNL197C YKR011CQ02209 353 aa4.31□□□□□ -1.72
WHI3YNL197C TRE2Q08693 809 aa4.31□□□□□ -1.72
WHI3YNL197C DAL3P32459 195 aa4.31□□□□□ -1.72
WHI3YNL197C GPP2P40106 250 aaKnown RBP4.31□□□□□ -1.72
WHI3YNL197C DUG1P43616 481 aaKnown RBP4.31□□□□□ -1.72
WHI3YNL197C NIT2P47016 307 aa4.31□□□□□ -1.72
WHI3YNL197C ECM9Q02202 377 aa4.31□□□□□ -1.72
WHI3YNL197C YPL034WQ03083 165 aa4.31□□□□□ -1.72
WHI3YNL197C SSL1Q04673 461 aaPredicted RBP4.31□□□□□ -1.72
WHI3YNL197C SLX4Q12098 748 aa4.31□□□□□ -1.72
WHI3YNL197C HAL9Q12180 1030 aa4.31□□□□□ -1.72
WHI3YNL197C RFA1P22336 621 aaKnown RBP4.3□□□□□ -1.72
WHI3YNL197C CYS3P31373 394 aaKnown RBP4.3□□□□□ -1.72
WHI3YNL197C SRP101P32916 621 aa4.3□□□□□ -1.72
WHI3YNL197C TYE7P33122 291 aaPredicted RBP4.3□□□□□ -1.72
WHI3YNL197C TFC4P33339 1025 aa4.3□□□□□ -1.72
WHI3YNL197C YKR051WP36142 418 aa4.3□□□□□ -1.72
WHI3YNL197C HXT6P39003 570 aaKnown RBP4.3□□□□□ -1.72
WHI3YNL197C HXT7P39004 570 aa4.3□□□□□ -1.72
WHI3YNL197C TMA7Q3E764 64 aaKnown RBP4.3□□□□□ -1.72
WHI3YNL197C APL1P27351 700 aa4.29□□□□□ -1.72
WHI3YNL197C HSL7P38274 827 aa4.29□□□□□ -1.72
WHI3YNL197C RPN10P38886 268 aaKnown RBP4.29□□□□□ -1.72
WHI3YNL197C MNN11P46985 422 aaKnown RBP4.29□□□□□ -1.72
WHI3YNL197C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
WHI3YNL197C YGR012WP53206 393 aa4.29□□□□□ -1.72
WHI3YNL197C YOR022CQ12204 715 aa4.29□□□□□ -1.72
WHI3YNL197C YLR149CQ99296 730 aa4.29□□□□□ -1.72
WHI3YNL197C Q0142Q9ZZW4 58 aa4.29□□□□□ -1.72
WHI3YNL197C SET5P38890 526 aaKnown RBP4.29□□□□□ -1.72
WHI3YNL197C RET2P43621 546 aa4.29□□□□□ -1.72
WHI3YNL197C ORC3P54790 616 aa4.29□□□□□ -1.72
WHI3YNL197C DIF1O13577 133 aa4.28□□□□□ -1.72
WHI3YNL197C PIF1P07271 859 aa4.28□□□□□ -1.72
WHI3YNL197C SWE1P32944 819 aa4.28□□□□□ -1.72
WHI3YNL197C PEA2P40091 420 aa4.28□□□□□ -1.72
WHI3YNL197C YGR130CP53278 816 aa4.28□□□□□ -1.72
WHI3YNL197C ARP4P80428 489 aa4.28□□□□□ -1.72
WHI3YNL197C DCS2Q12123 353 aa4.28□□□□□ -1.72
WHI3YNL197C GPR1Q12361 961 aa4.28□□□□□ -1.72
WHI3YNL197C MPD2Q99316 277 aa4.28□□□□□ -1.72
WHI3YNL197C ATP4P05626 244 aa4.27□□□□□ -1.73
WHI3YNL197C RPS21AP0C0V8 87 aaKnown RBP4.27□□□□□ -1.73
WHI3YNL197C AEP2P22136 580 aa4.27□□□□□ -1.73
WHI3YNL197C COQ2P32378 372 aa4.27□□□□□ -1.73
WHI3YNL197C MNN4P36044 1178 aa4.27□□□□□ -1.73
WHI3YNL197C YKR018CP36114 725 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms