RNA–Protein interactions for RNA: YNL153C

GIM3, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeast

Gene GIM3, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIM3	YNL153C	OCA5	P38738	679 aa		4.68	□□□□□ -1.66
GIM3	YNL153C	NCS6	P53088	359 aa		4.68	□□□□□ -1.66
GIM3	YNL153C	ENV7	Q12003	364 aa		4.68	□□□□□ -1.66
GIM3	YNL153C	UPC2	Q12151	913 aa		4.68	□□□□□ -1.66
GIM3	YNL153C	RPS9A	O13516	197 aa	Known RBP	4.67	□□□□□ -1.66
GIM3	YNL153C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
GIM3	YNL153C	RPP2A	P05319	106 aa	Known RBP	4.67	□□□□□ -1.66
GIM3	YNL153C	ERR1	P0CX10	437 aa		4.67	□□□□□ -1.66
GIM3	YNL153C	ERR2	P0CX11	437 aa		4.67	□□□□□ -1.66
GIM3	YNL153C	CAD1	P24813	409 aa	Known RBP	4.67	□□□□□ -1.66
GIM3	YNL153C	SED4	P25365	1065 aa		4.67	□□□□□ -1.66
GIM3	YNL153C	URA1	P28272	314 aa	Predicted RBP	4.67	□□□□□ -1.66
GIM3	YNL153C	ATG19	P35193	415 aa		4.67	□□□□□ -1.66
GIM3	YNL153C	URM1	P40554	99 aa	Predicted RBP	4.67	□□□□□ -1.66
GIM3	YNL153C	HDA1	P53973	706 aa		4.67	□□□□□ -1.66
GIM3	YNL153C	MPH2	P0CD99	609 aa		4.66	□□□□□ -1.66
GIM3	YNL153C	STE11	P23561	717 aa		4.66	□□□□□ -1.66
GIM3	YNL153C	TYE7	P33122	291 aa	Predicted RBP	4.66	□□□□□ -1.66
GIM3	YNL153C	GGA2	P38817	585 aa	Known RBP	4.66	□□□□□ -1.66
GIM3	YNL153C	GYP8	P43570	497 aa		4.66	□□□□□ -1.66
GIM3	YNL153C	NIT3	P49954	291 aa		4.66	□□□□□ -1.66
GIM3	YNL153C	YKR011C	Q02209	353 aa		4.66	□□□□□ -1.66
GIM3	YNL153C	DAL7	P21826	554 aa		4.65	□□□□□ -1.67
GIM3	YNL153C	KAR4	P25583	335 aa		4.65	□□□□□ -1.67
GIM3	YNL153C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
GIM3	YNL153C	YCL002C	P25565	263 aa		4.64	□□□□□ -1.67
GIM3	YNL153C	CYS3	P31373	394 aa	Known RBP	4.64	□□□□□ -1.67
GIM3	YNL153C	STE14	P32584	239 aa		4.64	□□□□□ -1.67
GIM3	YNL153C	TIM23	P32897	222 aa		4.64	□□□□□ -1.67
GIM3	YNL153C	ALG2	P43636	503 aa		4.64	□□□□□ -1.67
GIM3	YNL153C	EXG2	P52911	562 aa		4.64	□□□□□ -1.67
GIM3	YNL153C	PUS2	P53167	370 aa		4.64	□□□□□ -1.67
GIM3	YNL153C	TUB2	P02557	457 aa	Known RBP	4.63	□□□□□ -1.67
GIM3	YNL153C	PMA1	P05030	918 aa	Known RBP	4.63	□□□□□ -1.67
GIM3	YNL153C	PFK1	P16861	987 aa	Known RBP	4.63	□□□□□ -1.67
GIM3	YNL153C	DCG1	P32460	244 aa		4.63	□□□□□ -1.67
GIM3	YNL153C	SCT1	P32784	759 aa		4.63	□□□□□ -1.67
GIM3	YNL153C	TAD1	P53065	400 aa		4.63	□□□□□ -1.67
GIM3	YNL153C	YGR283C	P53336	341 aa	Predicted RBP	4.63	□□□□□ -1.67
GIM3	YNL153C	PPM2	Q08282	695 aa		4.63	□□□□□ -1.67
GIM3	YNL153C	NTO1	Q12311	748 aa		4.63	□□□□□ -1.67
GIM3	YNL153C	TRM2	P33753	639 aa		4.62	□□□□□ -1.67
GIM3	YNL153C	CHZ1	P40019	153 aa	Predicted RBP	4.62	□□□□□ -1.67
GIM3	YNL153C	SDP1	P40479	209 aa		4.62	□□□□□ -1.67
GIM3	YNL153C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
GIM3	YNL153C	NOG2	P53742	486 aa	Known RBP	4.62	□□□□□ -1.67
GIM3	YNL153C	RPN4	Q03465	531 aa		4.62	□□□□□ -1.67
GIM3	YNL153C	LRS4	Q04087	347 aa	Known RBP	4.62	□□□□□ -1.67
GIM3	YNL153C	HAL9	Q12180	1030 aa		4.62	□□□□□ -1.67
GIM3	YNL153C	YOR022C	Q12204	715 aa		4.62	□□□□□ -1.67
GIM3	YNL153C	LAS17	Q12446	633 aa		4.62	□□□□□ -1.67
GIM3	YNL153C	FBP1	P09201	348 aa		4.61	□□□□□ -1.67
GIM3	YNL153C	PER1	P25625	357 aa		4.61	□□□□□ -1.67
GIM3	YNL153C	SEC21	P32074	935 aa	Known RBP	4.61	□□□□□ -1.67
GIM3	YNL153C	EMC3	P36039	253 aa		4.61	□□□□□ -1.67
GIM3	YNL153C	SAP190	P36123	1033 aa		4.61	□□□□□ -1.67
GIM3	YNL153C	MSS4	P38994	779 aa		4.61	□□□□□ -1.67
GIM3	YNL153C	HSV2	P50079	448 aa	Predicted RBP	4.61	□□□□□ -1.67
GIM3	YNL153C	DAM1	P53267	343 aa		4.61	□□□□□ -1.67
GIM3	YNL153C	SLU7	Q02775	382 aa	Known RBP	4.61	□□□□□ -1.67
GIM3	YNL153C	YDR514C	Q04408	483 aa		4.61	□□□□□ -1.67
GIM3	YNL153C	PRC1	P00729	532 aa		4.6	□□□□□ -1.67
GIM3	YNL153C	RAD53	P22216	821 aa		4.6	□□□□□ -1.67
GIM3	YNL153C	NUP82	P40368	713 aa		4.6	□□□□□ -1.67
GIM3	YNL153C	BUD6	P41697	788 aa		4.6	□□□□□ -1.67
GIM3	YNL153C	SUN4	P53616	420 aa		4.6	□□□□□ -1.67
GIM3	YNL153C	PEX19	Q07418	342 aa		4.6	□□□□□ -1.67
GIM3	YNL153C	MET7	Q08645	548 aa		4.6	□□□□□ -1.67
GIM3	YNL153C	HRR25	P29295	494 aa	Known RBP	4.59	□□□□□ -1.67
GIM3	YNL153C	SPC29	P33419	253 aa		4.59	□□□□□ -1.67
GIM3	YNL153C	YHR078W	P38799	552 aa		4.59	□□□□□ -1.67
GIM3	YNL153C	CTF8	P38877	133 aa		4.59	□□□□□ -1.67
GIM3	YNL153C	GDH3	P39708	457 aa		4.59	□□□□□ -1.67
GIM3	YNL153C	DUS1	P53759	423 aa	Known RBP	4.59	□□□□□ -1.67
GIM3	YNL153C	AIM39	Q08223	395 aa		4.59	□□□□□ -1.67
GIM3	YNL153C	CIT2	P08679	460 aa		4.58	□□□□□ -1.68
GIM3	YNL153C	DEF1	P35732	738 aa	Known RBP	4.58	□□□□□ -1.68
GIM3	YNL153C	KIN4	Q01919	800 aa		4.58	□□□□□ -1.68
GIM3	YNL153C	ENB1	Q08299	606 aa		4.58	□□□□□ -1.68
GIM3	YNL153C	GUP2	Q08929	609 aa		4.58	□□□□□ -1.68
GIM3	YNL153C	SWM1	Q12379	170 aa		4.58	□□□□□ -1.68
GIM3	YNL153C	PHO8	P11491	566 aa		4.57	□□□□□ -1.68
GIM3	YNL153C	PMI40	P29952	429 aa	Known RBP	4.57	□□□□□ -1.68
GIM3	YNL153C	VHR1	P40522	640 aa		4.57	□□□□□ -1.68
GIM3	YNL153C	AIM21	P40563	679 aa		4.57	□□□□□ -1.68
GIM3	YNL153C	SHR5	P41912	237 aa		4.57	□□□□□ -1.68
GIM3	YNL153C	TY4A-J	P47023	414 aa		4.57	□□□□□ -1.68
GIM3	YNL153C	MSE1	P48525	536 aa		4.57	□□□□□ -1.68
GIM3	YNL153C	PUS9	Q12069	462 aa		4.57	□□□□□ -1.68
GIM3	YNL153C	TUB3	P09734	445 aa	Known RBP	4.56	□□□□□ -1.68
GIM3	YNL153C	SAK1	P38990	1142 aa		4.56	□□□□□ -1.68
GIM3	YNL153C	SSY5	P47002	699 aa		4.56	□□□□□ -1.68
GIM3	YNL153C	MAL11	P53048	616 aa		4.56	□□□□□ -1.68
GIM3	YNL153C	CRR1	Q05790	422 aa		4.56	□□□□□ -1.68
GIM3	YNL153C	REH1	Q06709	432 aa		4.56	□□□□□ -1.68
GIM3	YNL153C	YTA7	P40340	1379 aa		4.55	□□□□□ -1.68
GIM3	YNL153C	PRP4	P20053	465 aa	Known RBP	4.55	□□□□□ -1.68
GIM3	YNL153C	THI4	P32318	326 aa		4.55	□□□□□ -1.68
GIM3	YNL153C	SET5	P38890	526 aa	Known RBP	4.55	□□□□□ -1.68
GIM3	YNL153C	DSS1	P39112	969 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms