RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C YEL023CP39992 682 aa6.93□□□□□ -1.3
SCS7YMR272C MOB1P40484 314 aa6.93□□□□□ -1.3
SCS7YMR272C FAF1P40546 346 aaPredicted RBP6.93□□□□□ -1.3
SCS7YMR272C INP52P50942 1183 aa6.93□□□□□ -1.3
SCS7YMR272C ART5P53244 586 aaKnown RBP6.93□□□□□ -1.3
SCS7YMR272C NOP13P53883 403 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
SCS7YMR272C VTC3Q02725 835 aa6.93□□□□□ -1.3
SCS7YMR272C VPS20Q04272 221 aa6.93□□□□□ -1.3
SCS7YMR272C TAF10Q12030 206 aa6.93□□□□□ -1.3
SCS7YMR272C SGT2Q12118 346 aaKnown RBP6.93□□□□□ -1.3
SCS7YMR272C PUS1Q12211 544 aaKnown RBP6.93□□□□□ -1.3
SCS7YMR272C PKH2Q12236 1081 aaKnown RBP6.93□□□□□ -1.3
SCS7YMR272C OSH2Q12451 1283 aa6.93□□□□□ -1.3
SCS7YMR272C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3 RIP-Chip
SCS7YMR272C TAF13P11747 167 aa6.92□□□□□ -1.3
SCS7YMR272C NAM7P30771 971 aaKnown RBP6.92□□□□□ -1.3
SCS7YMR272C RPT1P33299 467 aaKnown RBP6.92□□□□□ -1.3
SCS7YMR272C BRE2P43132 505 aa6.92□□□□□ -1.3
SCS7YMR272C YFL052WP43551 465 aa6.92□□□□□ -1.3
SCS7YMR272C AVT1P47082 602 aa6.92□□□□□ -1.3
SCS7YMR272C COS5P47187 383 aa6.92□□□□□ -1.3
SCS7YMR272C CCM1P48237 864 aaPredicted RBP6.92□□□□□ -1.3
SCS7YMR272C GUP1P53154 560 aa6.92□□□□□ -1.3
SCS7YMR272C TOF1P53840 1238 aa6.92□□□□□ -1.3
SCS7YMR272C ADY4Q05955 493 aa6.92□□□□□ -1.3
SCS7YMR272C REC8Q12188 680 aa6.92□□□□□ -1.3
SCS7YMR272C HMG2P12684 1045 aa6.91□□□□□ -1.3
SCS7YMR272C NAT1P12945 854 aaKnown RBP6.91□□□□□ -1.3
SCS7YMR272C VMA1P17255 1071 aaKnown RBP6.91□□□□□ -1.3
SCS7YMR272C RAD27P26793 382 aa6.91□□□□□ -1.3
SCS7YMR272C KDX1P36005 433 aa6.91□□□□□ -1.3
SCS7YMR272C HEL1P36113 551 aa6.91□□□□□ -1.3
SCS7YMR272C CUE3P53137 624 aaKnown RBP6.91□□□□□ -1.3
SCS7YMR272C MNP1P53163 194 aaPredicted RBP6.91□□□□□ -1.3
SCS7YMR272C RCR2Q03446 210 aaKnown RBP6.91□□□□□ -1.3
SCS7YMR272C TRS130Q03660 1102 aa6.91□□□□□ -1.3
SCS7YMR272C TIF35Q04067 274 aaKnown RBP6.91□□□□□ -1.3
SCS7YMR272C COG8Q04632 607 aa6.91□□□□□ -1.3
SCS7YMR272C YPL277CQ08989 487 aa6.91□□□□□ -1.3
SCS7YMR272C NCR1Q12200 1170 aa6.91□□□□□ -1.3
SCS7YMR272C YOR022CQ12204 715 aa6.91□□□□□ -1.3
SCS7YMR272C MED1Q12321 566 aa6.91□□□□□ -1.3
SCS7YMR272C SNF1P06782 633 aaKnown RBP6.9□□□□□ -1.3
SCS7YMR272C YEL076C-AP0CX16 216 aa6.9□□□□□ -1.3
SCS7YMR272C YLR464WP0CX17 216 aa6.9□□□□□ -1.3
SCS7YMR272C MAS1P10507 462 aa6.9□□□□□ -1.3
SCS7YMR272C MBR1P23493 339 aa6.9□□□□□ -1.3
SCS7YMR272C CYS3P31373 394 aaKnown RBP6.9□□□□□ -1.3
SCS7YMR272C PPS1P38148 807 aa6.9□□□□□ -1.3
SCS7YMR272C STB5P38699 743 aa6.9□□□□□ -1.3
SCS7YMR272C PEX28P38848 579 aa6.9□□□□□ -1.3
SCS7YMR272C CCC2P38995 1004 aa6.9□□□□□ -1.3
SCS7YMR272C YEL076CP39971 216 aa6.9□□□□□ -1.3
SCS7YMR272C SIP5P40210 489 aaKnown RBP6.9□□□□□ -1.3
SCS7YMR272C ULP2P40537 1034 aaPredicted RBP6.9□□□□□ -1.3
SCS7YMR272C LSB6P42951 607 aa6.9□□□□□ -1.3
SCS7YMR272C TAF1P46677 1066 aa6.9□□□□□ -1.3
SCS7YMR272C PNG1Q02890 363 aa6.9□□□□□ -1.3
SCS7YMR272C UTP14Q04500 899 aaKnown RBP6.9□□□□□ -1.3
SCS7YMR272C SHS1Q07657 551 aa6.9□□□□□ -1.3
SCS7YMR272C TLG2Q08144 397 aa6.9□□□□□ -1.3
SCS7YMR272C PTC5Q12511 572 aa6.9□□□□□ -1.3
SCS7YMR272C OM45P16547 393 aa6.89□□□□□ -1.31
SCS7YMR272C ISY1P21374 235 aaPredicted RBP6.89□□□□□ -1.31
SCS7YMR272C RDS1P25611 832 aa6.89□□□□□ -1.31
SCS7YMR272C IMG2P25642 146 aaPredicted RBP6.89□□□□□ -1.31
SCS7YMR272C CDC15P27636 974 aa6.89□□□□□ -1.31
SCS7YMR272C YKT6P36015 200 aaKnown RBP6.89□□□□□ -1.31
SCS7YMR272C HMT1P38074 348 aa6.89□□□□□ -1.31
SCS7YMR272C RFT1P38206 574 aaPredicted RBP6.89□□□□□ -1.31
SCS7YMR272C NPP2P39997 493 aa6.89□□□□□ -1.31
SCS7YMR272C FTR1P40088 404 aa6.89□□□□□ -1.31
SCS7YMR272C SHQ1P40486 507 aaPredicted RBP6.89□□□□□ -1.31
SCS7YMR272C FYV8P46949 817 aaKnown RBP6.89□□□□□ -1.31
SCS7YMR272C VPS25P47142 202 aa6.89□□□□□ -1.31
SCS7YMR272C NUT1P53114 1132 aa6.89□□□□□ -1.31
SCS7YMR272C NSE5Q03718 556 aa6.89□□□□□ -1.31
SCS7YMR272C GIR2Q03768 265 aaPredicted RBP6.89□□□□□ -1.31
SCS7YMR272C PSR2Q07949 397 aa6.89□□□□□ -1.31
SCS7YMR272C ADE4P04046 510 aaKnown RBP6.88□□□□□ -1.31
SCS7YMR272C URA1P28272 314 aaPredicted RBP6.88□□□□□ -1.31
SCS7YMR272C PRR1P28708 518 aa6.88□□□□□ -1.31
SCS7YMR272C HIR1P32479 840 aa6.88□□□□□ -1.31
SCS7YMR272C SAC6P32599 642 aaKnown RBP6.88□□□□□ -1.31
SCS7YMR272C MNN4P36044 1178 aa6.88□□□□□ -1.31
SCS7YMR272C YBL036CP38197 257 aa6.88□□□□□ -1.31
SCS7YMR272C RFS1P38234 210 aaKnown RBP6.88□□□□□ -1.31
SCS7YMR272C YER186CP40101 306 aa6.88□□□□□ -1.31
SCS7YMR272C SAD1P43589 448 aa6.88□□□□□ -1.31
SCS7YMR272C YJL045WP47052 634 aa6.88□□□□□ -1.31
SCS7YMR272C TAM41P53230 385 aa6.88□□□□□ -1.31
SCS7YMR272C RLP24Q07915 199 aaKnown RBP6.88□□□□□ -1.31
SCS7YMR272C PLP2Q12017 286 aa6.88□□□□□ -1.31
SCS7YMR272C YDR034W-BQ6Q5X2 51 aa6.88□□□□□ -1.31
SCS7YMR272C TOM70P07213 617 aaKnown RBP6.87□□□□□ -1.31
SCS7YMR272C MAK16P10962 306 aaPredicted RBP6.87□□□□□ -1.31
SCS7YMR272C PGS1P25578 521 aa6.87□□□□□ -1.31
SCS7YMR272C CSE1P33307 960 aa6.87□□□□□ -1.31
SCS7YMR272C PIN4P34217 668 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
SCS7YMR272C VPS24P36095 224 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms