RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W YIR014WP40570 242 aa8.39□□□□□ -1.07
NUP53YMR153W ISM1P48526 1002 aa8.39□□□□□ -1.07
NUP53YMR153W ORC5P50874 479 aa8.39□□□□□ -1.07
NUP53YMR153W CUE3P53137 624 aaKnown RBP8.39□□□□□ -1.07
NUP53YMR153W MAP1Q01662 387 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
NUP53YMR153W PIG1Q06216 648 aa8.39□□□□□ -1.07
NUP53YMR153W CUR1Q06469 252 aa8.39□□□□□ -1.07
NUP53YMR153W DNL4Q08387 944 aaPredicted RBP8.39□□□□□ -1.07
NUP53YMR153W YPL277CQ08989 487 aa8.39□□□□□ -1.07
NUP53YMR153W OSH2Q12451 1283 aa8.39□□□□□ -1.07
NUP53YMR153W RPL4AP10664 362 aaKnown RBP8.38□□□□□ -1.07
NUP53YMR153W MNN4P36044 1178 aa8.38□□□□□ -1.07
NUP53YMR153W MMS4P38257 691 aa8.38□□□□□ -1.07
NUP53YMR153W YIR016WP40572 265 aa8.38□□□□□ -1.07
NUP53YMR153W RPL4BP49626 362 aaKnown RBP8.38□□□□□ -1.07
NUP53YMR153W SHE10P53075 577 aa8.38□□□□□ -1.07
NUP53YMR153W YNR014WP53719 212 aa8.38□□□□□ -1.07
NUP53YMR153W RCR2Q03446 210 aaKnown RBP8.38□□□□□ -1.07
NUP53YMR153W HRQ1Q05549 1077 aa8.38□□□□□ -1.07
NUP53YMR153W YLR257WQ06146 321 aaKnown RBP8.38□□□□□ -1.07
NUP53YMR153W MNL2Q12205 849 aa8.38□□□□□ -1.07
NUP53YMR153W PUS1Q12211 544 aaKnown RBP8.38□□□□□ -1.07
NUP53YMR153W TFC8Q12308 588 aa8.38□□□□□ -1.07
NUP53YMR153W LAA1P39526 2014 aa8.38□□□□□ -1.07
NUP53YMR153W PHO8P11491 566 aa8.37□□□□□ -1.07
NUP53YMR153W PCT1P13259 424 aa8.37□□□□□ -1.07
NUP53YMR153W PRR1P28708 518 aa8.37□□□□□ -1.07
NUP53YMR153W YEL1P34225 687 aa8.37□□□□□ -1.07
NUP53YMR153W CCC2P38995 1004 aa8.37□□□□□ -1.07
NUP53YMR153W YER186CP40101 306 aa8.37□□□□□ -1.07
NUP53YMR153W ASN1P49089 572 aaKnown RBP8.37□□□□□ -1.07
NUP53YMR153W VID30P53076 958 aa8.37□□□□□ -1.07
NUP53YMR153W MRI1Q06489 411 aaKnown RBP8.37□□□□□ -1.07
NUP53YMR153W TLG2Q08144 397 aa8.37□□□□□ -1.07
NUP53YMR153W MRN1Q08925 612 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
NUP53YMR153W DAL7P21826 554 aa8.37□□□□□ -1.07
NUP53YMR153W MBR1P23493 339 aa8.37□□□□□ -1.07
NUP53YMR153W COQ8P27697 501 aa8.37□□□□□ -1.07
NUP53YMR153W HIR1P32479 840 aa8.37□□□□□ -1.07
NUP53YMR153W TRM2P33753 639 aa8.37□□□□□ -1.07
NUP53YMR153W PCM1P38628 557 aaKnown RBP8.37□□□□□ -1.07
NUP53YMR153W CCM1P48237 864 aaPredicted RBP8.37□□□□□ -1.07
NUP53YMR153W STB4P50104 949 aa8.37□□□□□ -1.07
NUP53YMR153W NBP1P52919 319 aaPredicted RBP8.37□□□□□ -1.07
NUP53YMR153W UTP14Q04500 899 aaKnown RBP8.37□□□□□ -1.07
NUP53YMR153W PEX19Q07418 342 aa8.37□□□□□ -1.07
NUP53YMR153W SDH5Q08230 162 aa8.37□□□□□ -1.07
NUP53YMR153W REC8Q12188 680 aa8.37□□□□□ -1.07
NUP53YMR153W MRF1P30775 413 aaPredicted RBP8.36□□□□□ -1.07
NUP53YMR153W PEX2P32800 271 aa8.36□□□□□ -1.07
NUP53YMR153W RAD54P32863 898 aa8.36□□□□□ -1.07
NUP53YMR153W EEB1Q02891 456 aa8.36□□□□□ -1.07
NUP53YMR153W YPL216WQ08964 1102 aa8.36□□□□□ -1.07
NUP53YMR153W HAP2P06774 265 aa8.35□□□□□ -1.07
NUP53YMR153W SNF1P06782 633 aaKnown RBP8.35□□□□□ -1.07
NUP53YMR153W PEX1P24004 1043 aa8.35□□□□□ -1.07
NUP53YMR153W BIO2P32451 375 aa8.35□□□□□ -1.07
NUP53YMR153W SAC6P32599 642 aaKnown RBP8.35□□□□□ -1.07
NUP53YMR153W RFT1P38206 574 aaPredicted RBP8.35□□□□□ -1.07
NUP53YMR153W YEL023CP39992 682 aa8.35□□□□□ -1.07
NUP53YMR153W BIM1P40013 344 aa8.35□□□□□ -1.07
NUP53YMR153W MGA2P40578 1113 aa8.35□□□□□ -1.07
NUP53YMR153W MAF1P41910 395 aa8.35□□□□□ -1.07
NUP53YMR153W YML083CQ04526 418 aa8.35□□□□□ -1.07
NUP53YMR153W CDC53Q12018 815 aaKnown RBP8.35□□□□□ -1.07
NUP53YMR153W VMA1P17255 1071 aaKnown RBP8.34□□□□□ -1.07
NUP53YMR153W MUD1P32605 298 aaKnown RBP8.34□□□□□ -1.07
NUP53YMR153W DSF2P38213 736 aa8.34□□□□□ -1.07
NUP53YMR153W ULI1P43604 169 aa8.34□□□□□ -1.07
NUP53YMR153W HSH155P49955 971 aaKnown RBP8.34□□□□□ -1.07
NUP53YMR153W NUT1P53114 1132 aa8.34□□□□□ -1.07
NUP53YMR153W YGR130CP53278 816 aa8.34□□□□□ -1.07
NUP53YMR153W PLP2Q12017 286 aa8.34□□□□□ -1.07
NUP53YMR153W CCH1P50077 2039 aa8.34□□□□□ -1.07
NUP53YMR153W MAS1P10507 462 aa8.33□□□□□ -1.08
NUP53YMR153W SSB1P11484 613 aaKnown RBP8.33□□□□□ -1.08
NUP53YMR153W PEX28P38848 579 aa8.33□□□□□ -1.08
NUP53YMR153W SNF7P39929 240 aaKnown RBP8.33□□□□□ -1.08
NUP53YMR153W NPP2P39997 493 aa8.33□□□□□ -1.08
NUP53YMR153W SSB2P40150 613 aaKnown RBP8.33□□□□□ -1.08
NUP53YMR153W SPC98P53540 846 aa8.33□□□□□ -1.08
NUP53YMR153W RAD59Q12223 238 aa8.33□□□□□ -1.08
NUP53YMR153W ATP1P07251 545 aaKnown RBP8.32□□□□□ -1.08
NUP53YMR153W ASP3-2P0CX77 362 aa8.32□□□□□ -1.08
NUP53YMR153W ASP3-3P0CX78 362 aa8.32□□□□□ -1.08
NUP53YMR153W ASP3-4P0CX79 362 aa8.32□□□□□ -1.08
NUP53YMR153W ASP3-1P0CZ17 362 aa8.32□□□□□ -1.08
NUP53YMR153W KGD2P19262 463 aaPredicted RBP8.32□□□□□ -1.08
NUP53YMR153W RAD27P26793 382 aa8.32□□□□□ -1.08
NUP53YMR153W TRK2P28584 889 aa8.32□□□□□ -1.08
NUP53YMR153W YKL091CP33324 310 aaKnown RBP8.32□□□□□ -1.08
NUP53YMR153W PIN4P34217 668 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
NUP53YMR153W MOB1P40484 314 aa8.32□□□□□ -1.08
NUP53YMR153W HUL4P40985 892 aa8.32□□□□□ -1.08
NUP53YMR153W TOS3P43637 560 aa8.32□□□□□ -1.08
NUP53YMR153W SNU56Q03782 492 aaKnown RBP8.32□□□□□ -1.08
NUP53YMR153W VMS1Q04311 632 aaKnown RBP8.32□□□□□ -1.08
NUP53YMR153W MLH2Q07980 695 aa8.32□□□□□ -1.08
NUP53YMR153W MED1Q12321 566 aa8.32□□□□□ -1.08
NUP53YMR153W VPS3P23643 1011 aa8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 194.6 ms