RNA–Protein interactions for RNA: YML072C

TCB3, Transcript of Cortical ER protein involved in ER-plasma membrane tethering, yeast

Gene TCB3, Length 4,638 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCB3	YML072C	BIM1	P40013	344 aa		4.1	□□□□□ -1.75
TCB3	YML072C	NUP84	P52891	726 aa		4.1	□□□□□ -1.75
TCB3	YML072C	APL5	Q08951	932 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	CHO2	P05374	869 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	BET2	P20133	325 aa		4.1	□□□□□ -1.75
TCB3	YML072C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
TCB3	YML072C	VID24	P38263	362 aa		4.1	□□□□□ -1.75
TCB3	YML072C	NMD3	P38861	518 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	STT3	P39007	718 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	PRY3	P47033	881 aa		4.1	□□□□□ -1.75
TCB3	YML072C	UBA2	P52488	636 aa		4.1	□□□□□ -1.75
TCB3	YML072C	YMR321C	Q04898	105 aa		4.1	□□□□□ -1.75
TCB3	YML072C	RPN8	Q08723	338 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	HIS4	P00815	799 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	BMH1	P29311	267 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	RAM2	P29703	316 aa		4.1	□□□□□ -1.75
TCB3	YML072C	HMT1	P38074	348 aa		4.1	□□□□□ -1.75
TCB3	YML072C	BRN1	P38170	754 aa		4.1	□□□□□ -1.75
TCB3	YML072C	BTT1	P40314	149 aa	Predicted RBP	4.1	□□□□□ -1.75
TCB3	YML072C	VTC4	P47075	721 aa		4.1	□□□□□ -1.75
TCB3	YML072C	EIS1	Q05050	843 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	PYC1	P11154	1178 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	EFB1	P32471	206 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	YSC83	P32792	385 aa		4.1	□□□□□ -1.75
TCB3	YML072C	CSE2	P33308	149 aa		4.1	□□□□□ -1.75
TCB3	YML072C	NOP4	P37838	685 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	PCI8	P40512	444 aa		4.1	□□□□□ -1.75
TCB3	YML072C	YGL039W	P53183	348 aa	Known RBP	4.1	□□□□□ -1.75
TCB3	YML072C	SUE1	Q06524	206 aa		4.1	□□□□□ -1.75
TCB3	YML072C	YPL277C	Q08989	487 aa		4.1	□□□□□ -1.75
TCB3	YML072C	YOL098C	Q12496	1037 aa		4.1	□□□□□ -1.75
TCB3	YML072C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
TCB3	YML072C	RFC5	P38251	354 aa		4.09	□□□□□ -1.75
TCB3	YML072C	SLX1	P38324	304 aa		4.09	□□□□□ -1.75
TCB3	YML072C	PPX1	P38698	397 aa		4.09	□□□□□ -1.75
TCB3	YML072C	RIM4	P38741	713 aa		4.09	□□□□□ -1.75
TCB3	YML072C	SAP185	P40856	1058 aa		4.09	□□□□□ -1.75
TCB3	YML072C	MFB1	Q04922	465 aa		4.09	□□□□□ -1.75
TCB3	YML072C	SHS1	Q07657	551 aa		4.09	□□□□□ -1.75
TCB3	YML072C	FOB1	O13329	566 aa		4.09	□□□□□ -1.75
TCB3	YML072C	PFK1	P16861	987 aa	Known RBP	4.09	□□□□□ -1.75
TCB3	YML072C	YHL026C	P38740	315 aa		4.09	□□□□□ -1.75
TCB3	YML072C	OPT1	P40897	799 aa		4.09	□□□□□ -1.75
TCB3	YML072C	YJR079W	P47126	109 aa		4.09	□□□□□ -1.75
TCB3	YML072C	EAF7	P53911	425 aa	Known RBP	4.09	□□□□□ -1.75
TCB3	YML072C	YDR090C	Q03193	310 aa		4.09	□□□□□ -1.75
TCB3	YML072C	EMI2	Q04409	500 aa	Known RBP	4.09	□□□□□ -1.75
TCB3	YML072C	YKL091C	P33324	310 aa	Known RBP	4.09	□□□□□ -1.75
TCB3	YML072C	ADA2	Q02336	434 aa		4.09	□□□□□ -1.75
TCB3	YML072C	STE20	Q03497	939 aa	Known RBP	4.09	□□□□□ -1.75
TCB3	YML072C	FUS2	Q05670	677 aa		4.09	□□□□□ -1.75
TCB3	YML072C	PRC1	P00729	532 aa		4.09	□□□□□ -1.76
TCB3	YML072C	GAL80	P04387	435 aa		4.09	□□□□□ -1.76
TCB3	YML072C	SEC23	P15303	768 aa	Known RBP	4.09	□□□□□ -1.76
TCB3	YML072C	URK1	P27515	501 aa		4.09	□□□□□ -1.76
TCB3	YML072C	TSA1	P34760	196 aa	Known RBP	4.09	□□□□□ -1.76
TCB3	YML072C	PIB2	P53191	635 aa		4.09	□□□□□ -1.76
TCB3	YML072C	ROD1	Q02805	837 aa		4.09	□□□□□ -1.76
TCB3	YML072C	DED1	P06634	604 aa	Known RBP	4.08	□□□□□ -1.76
TCB3	YML072C	SRP54	P20424	541 aa	Known RBP	4.08	□□□□□ -1.76
TCB3	YML072C	RSA4	P25382	515 aa	Known RBP	4.08	□□□□□ -1.76
TCB3	YML072C	MUM2	P38236	366 aa		4.08	□□□□□ -1.76
TCB3	YML072C	SMC2	P38989	1170 aa	Known RBP	4.08	□□□□□ -1.76
TCB3	YML072C	CCC2	P38995	1004 aa		4.08	□□□□□ -1.76
TCB3	YML072C	TFG2	P41896	400 aa	Predicted RBP	4.08	□□□□□ -1.76
TCB3	YML072C	EPL1	P43572	832 aa		4.08	□□□□□ -1.76
TCB3	YML072C	COQ9	Q05779	260 aa		4.08	□□□□□ -1.76
TCB3	YML072C	OPY2	Q06810	360 aa		4.08	□□□□□ -1.76
TCB3	YML072C	RRD2	Q12461	358 aa		4.08	□□□□□ -1.76
TCB3	YML072C	PGA3	Q12746	312 aa	Known RBP	4.08	□□□□□ -1.76
TCB3	YML072C	PDE1	P22434	369 aa		4.08	□□□□□ -1.76
TCB3	YML072C	TYE7	P33122	291 aa	Predicted RBP	4.08	□□□□□ -1.76
TCB3	YML072C	COY1	P34237	679 aa		4.08	□□□□□ -1.76
TCB3	YML072C	HEL1	P36113	551 aa		4.08	□□□□□ -1.76
TCB3	YML072C	RAD26	P40352	1085 aa		4.08	□□□□□ -1.76
TCB3	YML072C	INP51	P40559	946 aa	Known RBP	4.08	□□□□□ -1.76
TCB3	YML072C	YNR061C	P53747	219 aa		4.08	□□□□□ -1.76
TCB3	YML072C	VTC3	Q02725	835 aa		4.08	□□□□□ -1.76
TCB3	YML072C	DON1	Q05610	365 aa		4.08	□□□□□ -1.76
TCB3	YML072C	YLR297W	Q05899	129 aa		4.08	□□□□□ -1.76
TCB3	YML072C	YPR084W	Q06821	456 aa		4.08	□□□□□ -1.76
TCB3	YML072C	MLH2	Q07980	695 aa		4.08	□□□□□ -1.76
TCB3	YML072C	SGE1	P33335	543 aa		4.08	□□□□□ -1.76
TCB3	YML072C	ATG12	P38316	186 aa		4.08	□□□□□ -1.76
TCB3	YML072C	SSP1	P38871	571 aa		4.08	□□□□□ -1.76
TCB3	YML072C	RPA49	Q01080	415 aa	Predicted RBP	4.08	□□□□□ -1.76
TCB3	YML072C	JIP3	O13555	125 aa		4.07	□□□□□ -1.76
TCB3	YML072C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	RIP-Chip
TCB3	YML072C	HOM2	P13663	365 aa	Known RBP	4.07	□□□□□ -1.76
TCB3	YML072C	MTF1	P14908	341 aa	Known RBP	4.07	□□□□□ -1.76
TCB3	YML072C	MCM3	P24279	971 aa	Known RBP	4.07	□□□□□ -1.76
TCB3	YML072C	SGF29	P25554	259 aa		4.07	□□□□□ -1.76
TCB3	YML072C	XRS2	P33301	854 aa		4.07	□□□□□ -1.76
TCB3	YML072C	CUE3	P53137	624 aa	Known RBP	4.07	□□□□□ -1.76
TCB3	YML072C	YDR344C	Q05510	147 aa		4.07	□□□□□ -1.76
TCB3	YML072C	PLP2	Q12017	286 aa		4.07	□□□□□ -1.76
TCB3	YML072C	SPC110	P32380	944 aa		4.07	□□□□□ -1.76
TCB3	YML072C	HSP78	P33416	811 aa		4.07	□□□□□ -1.76
TCB3	YML072C	PRX1	P34227	261 aa	Known RBP	4.07	□□□□□ -1.76
TCB3	YML072C	ATH1	P48016	1211 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms