RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC1	YML031W	VID24	P38263	362 aa		5.75	□□□□□ -1.49
NDC1	YML031W	YGR153W	P48238	217 aa		5.75	□□□□□ -1.49
NDC1	YML031W	YGR130C	P53278	816 aa		5.75	□□□□□ -1.49
NDC1	YML031W	CBK1	P53894	756 aa		5.75	□□□□□ -1.49
NDC1	YML031W	YDR090C	Q03193	310 aa		5.75	□□□□□ -1.49
NDC1	YML031W	HAP2	P06774	265 aa		5.74	□□□□□ -1.49
NDC1	YML031W	ATP1	P07251	545 aa	Known RBP	5.74	□□□□□ -1.49
NDC1	YML031W	SPE1	P08432	466 aa		5.74	□□□□□ -1.49
NDC1	YML031W	RPC53	P25441	422 aa		5.74	□□□□□ -1.49
NDC1	YML031W	PEX2	P32800	271 aa		5.74	□□□□□ -1.49
NDC1	YML031W	VPS35	P34110	944 aa		5.74	□□□□□ -1.49
NDC1	YML031W	HMT1	P38074	348 aa		5.74	□□□□□ -1.49
NDC1	YML031W	SIP3	P38717	1229 aa		5.74	□□□□□ -1.49
NDC1	YML031W	ERC1	P38767	581 aa		5.74	□□□□□ -1.49
NDC1	YML031W	PIH1	P38768	344 aa		5.74	□□□□□ -1.49
NDC1	YML031W	CAF130	P53280	1122 aa	Predicted RBP	5.74	□□□□□ -1.49
NDC1	YML031W	HAP5	Q02516	242 aa		5.74	□□□□□ -1.49
NDC1	YML031W	RCR2	Q03446	210 aa	Known RBP	5.74	□□□□□ -1.49
NDC1	YML031W	PLP2	Q12017	286 aa		5.74	□□□□□ -1.49
NDC1	YML031W	ZPS1	Q12512	249 aa		5.74	□□□□□ -1.49
NDC1	YML031W	HXK1	P04806	485 aa	Known RBP	5.73	□□□□□ -1.49
NDC1	YML031W	HMG2	P12684	1045 aa		5.73	□□□□□ -1.49
NDC1	YML031W	ALG1	P16661	449 aa		5.73	□□□□□ -1.49
NDC1	YML031W	VPH1	P32563	840 aa	Known RBP	5.73	□□□□□ -1.49
NDC1	YML031W	MNR2	P35724	969 aa		5.73	□□□□□ -1.49
NDC1	YML031W	ARP1	P38696	384 aa		5.73	□□□□□ -1.49
NDC1	YML031W	YER186C	P40101	306 aa		5.73	□□□□□ -1.49
NDC1	YML031W	NUT1	P53114	1132 aa		5.73	□□□□□ -1.49
NDC1	YML031W	RTC4	P53850	401 aa		5.73	□□□□□ -1.49
NDC1	YML031W	ALG11	P53954	548 aa	Known RBP	5.73	□□□□□ -1.49
NDC1	YML031W	PSK2	Q08217	1101 aa		5.73	□□□□□ -1.49
NDC1	YML031W	CIT2	P08679	460 aa		5.73	□□□□□ -1.49
NDC1	YML031W	PCM1	P38628	557 aa	Known RBP	5.73	□□□□□ -1.49
NDC1	YML031W	NUP82	P40368	713 aa		5.73	□□□□□ -1.49
NDC1	YML031W	ARK1	P53974	638 aa		5.73	□□□□□ -1.49
NDC1	YML031W	PML39	Q03760	334 aa		5.73	□□□□□ -1.49
NDC1	YML031W	ADY4	Q05955	493 aa		5.73	□□□□□ -1.49
NDC1	YML031W	DCS2	Q12123	353 aa		5.73	□□□□□ -1.49
NDC1	YML031W	REC8	Q12188	680 aa		5.73	□□□□□ -1.49
NDC1	YML031W	PUS1	Q12211	544 aa	Known RBP	5.73	□□□□□ -1.49
NDC1	YML031W	OSH2	Q12451	1283 aa		5.73	□□□□□ -1.49
NDC1	YML031W	YEL076C-A	P0CX16	216 aa		5.72	□□□□□ -1.49
NDC1	YML031W	YLR464W	P0CX17	216 aa		5.72	□□□□□ -1.49
NDC1	YML031W	MAS1	P10507	462 aa		5.72	□□□□□ -1.49
NDC1	YML031W	CKA2	P19454	339 aa		5.72	□□□□□ -1.49
NDC1	YML031W	RAM1	P22007	431 aa		5.72	□□□□□ -1.49
NDC1	YML031W	COY1	P34237	679 aa		5.72	□□□□□ -1.49
NDC1	YML031W	YEL076C	P39971	216 aa		5.72	□□□□□ -1.49
NDC1	YML031W	ENT3	P47160	408 aa		5.72	□□□□□ -1.49
NDC1	YML031W	ENV11	P53246	860 aa		5.72	□□□□□ -1.49
NDC1	YML031W	EEB1	Q02891	456 aa		5.72	□□□□□ -1.49
NDC1	YML031W	TRS130	Q03660	1102 aa		5.72	□□□□□ -1.49
NDC1	YML031W	EIS1	Q05050	843 aa	Known RBP	5.72	□□□□□ -1.49
NDC1	YML031W	RNR2	P09938	399 aa	Known RBP	5.71	□□□□□ -1.49
NDC1	YML031W	PFK1	P16861	987 aa	Known RBP	5.71	□□□□□ -1.49
NDC1	YML031W	KGD2	P19262	463 aa	Predicted RBP	5.71	□□□□□ -1.49
NDC1	YML031W	PGS1	P25578	521 aa		5.71	□□□□□ -1.49
NDC1	YML031W	CYS3	P31373	394 aa	Known RBP	5.71	□□□□□ -1.49
NDC1	YML031W	PGM2	P37012	569 aa	Known RBP	5.71	□□□□□ -1.49
NDC1	YML031W	LSB6	P42951	607 aa		5.71	□□□□□ -1.49
NDC1	YML031W	BFA1	P47113	574 aa		5.71	□□□□□ -1.49
NDC1	YML031W	CTF18	P49956	741 aa		5.71	□□□□□ -1.49
NDC1	YML031W	SHE10	P53075	577 aa		5.71	□□□□□ -1.49
NDC1	YML031W	CWC21	Q03375	135 aa	Known RBP	5.71	□□□□□ -1.49
NDC1	YML031W	CAN1	P04817	590 aa		5.71	□□□□□ -1.5
NDC1	YML031W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
NDC1	YML031W	RAM2	P29703	316 aa		5.71	□□□□□ -1.5
NDC1	YML031W	NAM7	P30771	971 aa	Known RBP	5.71	□□□□□ -1.5
NDC1	YML031W	MRF1	P30775	413 aa	Predicted RBP	5.71	□□□□□ -1.5
NDC1	YML031W	YSC83	P32792	385 aa		5.71	□□□□□ -1.5
NDC1	YML031W	MMS4	P38257	691 aa		5.71	□□□□□ -1.5
NDC1	YML031W	NPA3	P47122	385 aa		5.71	□□□□□ -1.5
NDC1	YML031W	VTC3	Q02725	835 aa		5.71	□□□□□ -1.5
NDC1	YML031W	LEE1	Q02799	301 aa	Known RBP	5.71	□□□□□ -1.5
NDC1	YML031W	COG8	Q04632	607 aa		5.71	□□□□□ -1.5
NDC1	YML031W	PRR1	P28708	518 aa		5.7	□□□□□ -1.5
NDC1	YML031W	TRM2	P33753	639 aa		5.7	□□□□□ -1.5
NDC1	YML031W	MAP2	P38174	421 aa	Known RBP	5.7	□□□□□ -1.5
NDC1	YML031W	STB4	P50104	949 aa		5.7	□□□□□ -1.5
NDC1	YML031W	GUP1	P53154	560 aa		5.7	□□□□□ -1.5
NDC1	YML031W	TAM41	P53230	385 aa		5.7	□□□□□ -1.5
NDC1	YML031W	RSC1	P53236	928 aa		5.7	□□□□□ -1.5
NDC1	YML031W	SPC98	P53540	846 aa		5.7	□□□□□ -1.5
NDC1	YML031W	FAR11	P53917	953 aa		5.7	□□□□□ -1.5
NDC1	YML031W	NSE5	Q03718	556 aa		5.7	□□□□□ -1.5
NDC1	YML031W	SHS1	Q07657	551 aa		5.7	□□□□□ -1.5
NDC1	YML031W	PTC5	Q12511	572 aa		5.7	□□□□□ -1.5
NDC1	YML031W	HIS5	P07172	385 aa		5.69	□□□□□ -1.5
NDC1	YML031W	PDE1	P22434	369 aa		5.69	□□□□□ -1.5
NDC1	YML031W	SGF29	P25554	259 aa		5.69	□□□□□ -1.5
NDC1	YML031W	PET10	P36139	283 aa		5.69	□□□□□ -1.5
NDC1	YML031W	UBP13	P38187	747 aa		5.69	□□□□□ -1.5
NDC1	YML031W	RKM3	P38222	552 aa		5.69	□□□□□ -1.5
NDC1	YML031W	SIP5	P40210	489 aa	Known RBP	5.69	□□□□□ -1.5
NDC1	YML031W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
NDC1	YML031W	TOF1	P53840	1238 aa		5.69	□□□□□ -1.5
NDC1	YML031W	ADA2	Q02336	434 aa		5.69	□□□□□ -1.5
NDC1	YML031W	CUR1	Q06469	252 aa		5.69	□□□□□ -1.5
NDC1	YML031W	RPL4A	P10664	362 aa	Known RBP	5.69	□□□□□ -1.5
NDC1	YML031W	HCM1	P25364	564 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 7 ms