RNA–Protein interactions for RNA: YML016C

PPZ1, Transcript of Serine/threonine protein phosphatase Z, isoform of Ppz2p, yeast

Gene PPZ1, Length 2,079 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPZ1	YML016C	YOL098C	Q12496	1037 aa		4.3	□□□□□ -1.72
PPZ1	YML016C	DED1	P06634	604 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	SEC23	P15303	768 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	SRP54	P20424	541 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	VMA4	P22203	233 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	OCA5	P38738	679 aa		4.29	□□□□□ -1.72
PPZ1	YML016C	SHU2	P38957	223 aa		4.29	□□□□□ -1.72
PPZ1	YML016C	AKR1	P39010	764 aa		4.29	□□□□□ -1.72
PPZ1	YML016C	CCT4	P39078	528 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	LSB3	P43603	459 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	YGR045C	P53229	120 aa		4.29	□□□□□ -1.72
PPZ1	YML016C	ALD6	P54115	500 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	DOT1	Q04089	582 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	ESF1	Q06344	628 aa	Known RBP	4.29	□□□□□ -1.72
PPZ1	YML016C	RPO41	P13433	1351 aa	Known RBP	4.28	□□□□□ -1.72
PPZ1	YML016C	MRP7	P12687	371 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	RSC6	P25632	483 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	PUP2	P32379	260 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	VAC8	P39968	578 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	YPT11	P48559	417 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	GNP1	P48813	663 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	NNF2	P53253	936 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	ELA1	P53861	379 aa	Predicted RBP	4.28	□□□□□ -1.72
PPZ1	YML016C	YPL034W	Q03083	165 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	MRL1	Q06815	381 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	PDR18	P53756	1333 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	RAD51	P25454	400 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	SEC65	P29478	273 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	DUT1	P33317	147 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	PGM1	P33401	570 aa	Known RBP	4.28	□□□□□ -1.72
PPZ1	YML016C	NMD3	P38861	518 aa	Known RBP	4.28	□□□□□ -1.72
PPZ1	YML016C	NDC80	P40460	691 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	SEC26	P41810	973 aa	Known RBP	4.28	□□□□□ -1.72
PPZ1	YML016C	EPL1	P43572	832 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	MTR4	P47047	1073 aa	Known RBP	4.28	□□□□□ -1.72
PPZ1	YML016C	HXT15	P54854	567 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	YCG1	Q06680	1035 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	YPL150W	Q12152	901 aa		4.28	□□□□□ -1.72
PPZ1	YML016C	JIP3	O13555	125 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	RAD1	P06777	1100 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	SWI3	P32591	825 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	CAJ1	P39101	391 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	VPS75	P53853	264 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	ROD1	Q02805	837 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	OMS1	Q06668	471 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	AFT2	Q08957	416 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	SEC39	Q12745	709 aa		4.27	□□□□□ -1.73
PPZ1	YML016C	RPO26	P20435	155 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	STE11	P23561	717 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	PET112	P33893	541 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	MUD2	P36084	527 aa	Known RBP	4.26	□□□□□ -1.73
PPZ1	YML016C	SPT8	P38915	602 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	MIC19	P43594	170 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	EAR1	Q03212	550 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	ATG23	Q06671	453 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	ATG9	Q12142	997 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
PPZ1	YML016C	PRP16	P15938	1071 aa	Predicted RBP	4.26	□□□□□ -1.73
PPZ1	YML016C	SEC14	P24280	304 aa	Known RBP	4.26	□□□□□ -1.73
PPZ1	YML016C	DPH5	P32469	300 aa	Predicted RBP	4.26	□□□□□ -1.73
PPZ1	YML016C	ADD66	P36040	267 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	OLA1	P38219	394 aa	Known RBP	4.26	□□□□□ -1.73
PPZ1	YML016C	SMF1	P38925	575 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	MAD1	P40957	749 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	HUL4	P40985	892 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	RAT1	Q02792	1006 aa	Known RBP	4.26	□□□□□ -1.73
PPZ1	YML016C	VPS16	Q03308	798 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	EST2	Q06163	884 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	GIC2	Q06648	383 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	BRE1	Q07457	700 aa	Known RBP	4.26	□□□□□ -1.73
PPZ1	YML016C	YLR001C	Q07895	862 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	YOL057W	Q08225	711 aa		4.26	□□□□□ -1.73
PPZ1	YML016C	RUD3	Q12234	484 aa	Known RBP	4.26	□□□□□ -1.73
PPZ1	YML016C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
PPZ1	YML016C	RAD53	P22216	821 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	ARG1	P22768	420 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	PAP1	P29468	568 aa	Known RBP	4.25	□□□□□ -1.73
PPZ1	YML016C	IMP2'	P32351	346 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	AFG2	P32794	780 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	YME2	P32843	850 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	NUP133	P36161	1157 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	TFG2	P41896	400 aa	Predicted RBP	4.25	□□□□□ -1.73
PPZ1	YML016C	YJR079W	P47126	109 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	BOP3	P53958	396 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	MTC5	Q03897	1148 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
PPZ1	YML016C	AVO1	Q08236	1176 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	YLL054C	Q12244	843 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	DNF3	Q12674	1656 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	HSP82	P02829	709 aa	Known RBP	4.25	□□□□□ -1.73
PPZ1	YML016C	HCA4	P20448	770 aa	Known RBP	4.25	□□□□□ -1.73
PPZ1	YML016C	DPB3	P27344	201 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	SAC6	P32599	642 aa	Known RBP	4.25	□□□□□ -1.73
PPZ1	YML016C	LAM1	P38851	1228 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	HUL5	P53119	910 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	SEC5	P89102	971 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	SWI1	P09547	1314 aa		4.25	□□□□□ -1.73
PPZ1	YML016C	RAD3	P06839	778 aa		4.24	□□□□□ -1.73
PPZ1	YML016C	KRS1	P15180	591 aa	Known RBP	4.24	□□□□□ -1.73
PPZ1	YML016C	PDB1	P32473	366 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms