RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C CCC2P38995 1004 aa9.92□□□□□ -0.82
SEC61YLR378C SDS3P40505 327 aa9.92□□□□□ -0.82
SEC61YLR378C AVT1P47082 602 aa9.92□□□□□ -0.82
SEC61YLR378C RPS7BP48164 190 aaKnown RBP9.92□□□□□ -0.82
SEC61YLR378C COQ9Q05779 260 aa9.92□□□□□ -0.82
SEC61YLR378C CSR1Q06705 408 aaKnown RBP9.92□□□□□ -0.82
SEC61YLR378C VAC14Q06708 880 aa9.92□□□□□ -0.82
SEC61YLR378C MUD1P32605 298 aaKnown RBP9.91□□□□□ -0.82
SEC61YLR378C PIN4P34217 668 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
SEC61YLR378C MOT2P34909 587 aaKnown RBP9.91□□□□□ -0.82
SEC61YLR378C YKL023WP36103 277 aaKnown RBP9.91□□□□□ -0.82
SEC61YLR378C SHE10P53075 577 aa9.91□□□□□ -0.82
SEC61YLR378C IES4Q08561 116 aa9.91□□□□□ -0.82
SEC61YLR378C TIF6Q12522 245 aaKnown RBP9.91□□□□□ -0.82
SEC61YLR378C TOM70P07213 617 aaKnown RBP9.9□□□□□ -0.82
SEC61YLR378C TUP1P16649 713 aa9.9□□□□□ -0.82
SEC61YLR378C PRE10P21242 288 aaKnown RBP RIP-Chip data9.9□□□□□ -0.82not detected
SEC61YLR378C YUR1P26725 428 aa9.9□□□□□ -0.82
SEC61YLR378C EFT1P32324 842 aaKnown RBP9.9□□□□□ -0.82
SEC61YLR378C EFM4P40516 257 aa9.9□□□□□ -0.82
SEC61YLR378C HXT8P40886 569 aa9.9□□□□□ -0.82
SEC61YLR378C MMM1P41800 426 aa9.9□□□□□ -0.82
SEC61YLR378C VTC3Q02725 835 aa9.9□□□□□ -0.82
SEC61YLR378C YLR225CQ05948 407 aaKnown RBP9.9□□□□□ -0.82
SEC61YLR378C DAS2Q12084 232 aa9.9□□□□□ -0.82
SEC61YLR378C MCM16Q12262 181 aa9.9□□□□□ -0.82
SEC61YLR378C CKI1P20485 582 aa9.9□□□□□ -0.83
SEC61YLR378C RAD57P25301 460 aa9.9□□□□□ -0.83
SEC61YLR378C DPB3P27344 201 aa9.9□□□□□ -0.83
SEC61YLR378C UTP14Q04500 899 aaKnown RBP9.9□□□□□ -0.83
SEC61YLR378C CDC53Q12018 815 aaKnown RBP9.9□□□□□ -0.83
SEC61YLR378C HFI1Q12060 488 aa9.9□□□□□ -0.83
SEC61YLR378C HIF1Q12373 385 aa9.9□□□□□ -0.83
SEC61YLR378C YDR461C-AQ2V2P7 80 aa9.9□□□□□ -0.83
SEC61YLR378C VMA1P17255 1071 aaKnown RBP9.89□□□□□ -0.83
SEC61YLR378C STE11P23561 717 aa9.89□□□□□ -0.83
SEC61YLR378C YEL043WP32618 956 aa9.89□□□□□ -0.83
SEC61YLR378C REI1P38344 393 aaPredicted RBP9.89□□□□□ -0.83
SEC61YLR378C TCD1P38756 429 aa9.89□□□□□ -0.83
SEC61YLR378C YMR124WP39523 943 aaKnown RBP9.89□□□□□ -0.83
SEC61YLR378C NPP2P39997 493 aa9.89□□□□□ -0.83
SEC61YLR378C SCD6P45978 349 aaKnown RBP RIP-Chip data9.89□□□□□ -0.83not detected
SEC61YLR378C ESBP6P53918 673 aa9.89□□□□□ -0.83
SEC61YLR378C SOV1Q04748 898 aa9.89□□□□□ -0.83
SEC61YLR378C POX1P13711 748 aa9.88□□□□□ -0.83
SEC61YLR378C GPT2P36148 743 aa9.88□□□□□ -0.83
SEC61YLR378C GUA1P38625 525 aaKnown RBP9.88□□□□□ -0.83
SEC61YLR378C JJJ3P47138 172 aa9.88□□□□□ -0.83
SEC61YLR378C HSH155P49955 971 aaKnown RBP9.88□□□□□ -0.83
SEC61YLR378C TAD1P53065 400 aa9.88□□□□□ -0.83
SEC61YLR378C CUL3P53202 744 aa9.88□□□□□ -0.83
SEC61YLR378C ENV11P53246 860 aa9.88□□□□□ -0.83
SEC61YLR378C YNL146WP53906 100 aa9.88□□□□□ -0.83
SEC61YLR378C BOP3P53958 396 aa9.88□□□□□ -0.83
SEC61YLR378C UBP3Q01477 912 aaKnown RBP RIP-Chip data9.88□□□□□ -0.83 RIP-Chip
SEC61YLR378C YDR090CQ03193 310 aa9.88□□□□□ -0.83
SEC61YLR378C NOP14Q99207 810 aaKnown RBP9.88□□□□□ -0.83
SEC61YLR378C ECM29P38737 1868 aa9.87□□□□□ -0.83
SEC61YLR378C MAS2P11914 482 aa9.87□□□□□ -0.83
SEC61YLR378C KIP1P28742 1111 aa9.87□□□□□ -0.83
SEC61YLR378C DPH2P32461 534 aa9.87□□□□□ -0.83
SEC61YLR378C HXT1P32465 570 aa9.87□□□□□ -0.83
SEC61YLR378C BUD16P39988 312 aa9.87□□□□□ -0.83
SEC61YLR378C ACF4P47129 309 aa9.87□□□□□ -0.83
SEC61YLR378C SGM1P47166 707 aa9.87□□□□□ -0.83
SEC61YLR378C MAL13P53338 473 aa9.87□□□□□ -0.83
SEC61YLR378C YML082WQ04533 649 aaKnown RBP9.87□□□□□ -0.83
SEC61YLR378C YDL206WQ12424 762 aa9.87□□□□□ -0.83
SEC61YLR378C SNF1P06782 633 aaKnown RBP9.86□□□□□ -0.83
SEC61YLR378C RAD54P32863 898 aa9.86□□□□□ -0.83
SEC61YLR378C SMY2P32909 740 aaKnown RBP9.86□□□□□ -0.83
SEC61YLR378C BYE1P36106 594 aa9.86□□□□□ -0.83
SEC61YLR378C ETP1P38748 585 aaKnown RBP9.86□□□□□ -0.83
SEC61YLR378C YGR021WP53212 290 aa9.86□□□□□ -0.83
SEC61YLR378C YML020WQ03722 664 aa9.86□□□□□ -0.83
SEC61YLR378C YLR001CQ07895 862 aa9.86□□□□□ -0.83
SEC61YLR378C SLX4Q12098 748 aa9.86□□□□□ -0.83
SEC61YLR378C TRP2P00899 507 aaKnown RBP9.85□□□□□ -0.83
SEC61YLR378C AFT1P22149 690 aa9.85□□□□□ -0.83
SEC61YLR378C KIN82P25341 720 aa9.85□□□□□ -0.83
SEC61YLR378C RRP1P35178 278 aaPredicted RBP9.85□□□□□ -0.83
SEC61YLR378C FTR1P40088 404 aa9.85□□□□□ -0.83
SEC61YLR378C ASN1P49089 572 aaKnown RBP9.85□□□□□ -0.83
SEC61YLR378C JJJ1P53863 590 aa9.85□□□□□ -0.83
SEC61YLR378C RPA49Q01080 415 aaPredicted RBP9.85□□□□□ -0.83
SEC61YLR378C TBF1Q02457 562 aa9.85□□□□□ -0.83
SEC61YLR378C NGL3Q03210 505 aa9.85□□□□□ -0.83
SEC61YLR378C RGA2Q06407 1009 aa9.85□□□□□ -0.83
SEC61YLR378C OSH2Q12451 1283 aa9.85□□□□□ -0.83
SEC61YLR378C NAT1P12945 854 aaKnown RBP9.84□□□□□ -0.83
SEC61YLR378C SWI3P32591 825 aa9.84□□□□□ -0.83
SEC61YLR378C SKG6P32900 734 aaPredicted RBP9.84□□□□□ -0.83
SEC61YLR378C VID24P38263 362 aa9.84□□□□□ -0.83
SEC61YLR378C KIC1P38692 1080 aa9.84□□□□□ -0.83
SEC61YLR378C SET5P38890 526 aaKnown RBP9.84□□□□□ -0.83
SEC61YLR378C PSY2P40164 858 aa9.84□□□□□ -0.83
SEC61YLR378C ORC5P50874 479 aa9.84□□□□□ -0.83
SEC61YLR378C SCS3P53012 380 aa9.84□□□□□ -0.83
SEC61YLR378C CEF1Q03654 590 aaPredicted RBP9.84□□□□□ -0.83
SEC61YLR378C ECM7Q06200 448 aa9.84□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms