RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W RSA3Q05942 220 aaKnown RBP2.9□□□□□ -1.95
HRD3YLR207W YLR257WQ06146 321 aaKnown RBP2.9□□□□□ -1.95
HRD3YLR207W YER152CP10356 443 aa2.89□□□□□ -1.95
HRD3YLR207W SST2P11972 698 aaKnown RBP2.89□□□□□ -1.95
HRD3YLR207W REC104P33323 182 aa2.89□□□□□ -1.95
HRD3YLR207W BAP2P38084 609 aa2.89□□□□□ -1.95
HRD3YLR207W YBR071WP38243 211 aa2.89□□□□□ -1.95
HRD3YLR207W SIT1P39980 628 aa2.89□□□□□ -1.95
HRD3YLR207W CCM1P48237 864 aaPredicted RBP2.89□□□□□ -1.95
HRD3YLR207W LCB5Q06147 687 aaKnown RBP2.89□□□□□ -1.95
HRD3YLR207W RAD9P14737 1309 aa2.89□□□□□ -1.95
HRD3YLR207W INH1P01097 85 aa2.89□□□□□ -1.95
HRD3YLR207W RPL11AP0C0W9 174 aaKnown RBP2.89□□□□□ -1.95
HRD3YLR207W RAD18P10862 487 aa2.89□□□□□ -1.95
HRD3YLR207W PGI1P12709 554 aaKnown RBP2.89□□□□□ -1.95
HRD3YLR207W PDC5P16467 563 aaKnown RBP2.89□□□□□ -1.95
HRD3YLR207W GFD2P25370 566 aaKnown RBP2.89□□□□□ -1.95
HRD3YLR207W PRO1P32264 428 aa2.89□□□□□ -1.95
HRD3YLR207W KNS1P32350 737 aaPredicted RBP2.89□□□□□ -1.95
HRD3YLR207W EUG1P32474 517 aa2.89□□□□□ -1.95
HRD3YLR207W YKL222CP35995 705 aa2.89□□□□□ -1.95
HRD3YLR207W PGM2P37012 569 aaKnown RBP2.89□□□□□ -1.95
HRD3YLR207W PNT1P38969 423 aa2.89□□□□□ -1.95
HRD3YLR207W GPB2P39717 880 aa2.89□□□□□ -1.95
HRD3YLR207W GPP1P41277 250 aaKnown RBP2.89□□□□□ -1.95
HRD3YLR207W DAM1P53267 343 aa2.89□□□□□ -1.95
HRD3YLR207W UBX4P54730 416 aa2.89□□□□□ -1.95
HRD3YLR207W ACM1Q08981 209 aa2.89□□□□□ -1.95
HRD3YLR207W RPL11BQ3E757 174 aaPredicted RBP2.89□□□□□ -1.95
HRD3YLR207W NHA1Q99271 985 aa2.89□□□□□ -1.95
HRD3YLR207W YOR093CQ12275 1648 aa2.89□□□□□ -1.95
HRD3YLR207W TY4B-PA0A0B7P3V8 1104 aa2.88□□□□□ -1.95
HRD3YLR207W ERS1P17261 260 aa2.88□□□□□ -1.95
HRD3YLR207W NAR1P23503 491 aaKnown RBP2.88□□□□□ -1.95
HRD3YLR207W MEF1P25039 761 aa2.88□□□□□ -1.95
HRD3YLR207W STO1P34160 861 aaKnown RBP2.88□□□□□ -1.95
HRD3YLR207W JNM1P36224 373 aa2.88□□□□□ -1.95
HRD3YLR207W RIM4P38741 713 aa2.88□□□□□ -1.95
HRD3YLR207W COG6P53959 839 aa2.88□□□□□ -1.95
HRD3YLR207W SVL3Q03088 825 aaKnown RBP2.88□□□□□ -1.95
HRD3YLR207W YDR514CQ04408 483 aa2.88□□□□□ -1.95
HRD3YLR207W ERP4Q12450 207 aa2.88□□□□□ -1.95
HRD3YLR207W TY4A-HQ6Q5P6 413 aa2.88□□□□□ -1.95
HRD3YLR207W COQ4O13525 335 aa2.88□□□□□ -1.95
HRD3YLR207W SSH4P32343 579 aa2.88□□□□□ -1.95
HRD3YLR207W TFC4P33339 1025 aa2.88□□□□□ -1.95
HRD3YLR207W YAP1801P38856 637 aa2.88□□□□□ -1.95
HRD3YLR207W MXR1P40029 184 aa2.88□□□□□ -1.95
HRD3YLR207W DOT6P40059 670 aaKnown RBP2.88□□□□□ -1.95
HRD3YLR207W MAL11P53048 616 aa2.88□□□□□ -1.95
HRD3YLR207W TAN1P53072 289 aaPredicted RBP2.88□□□□□ -1.95
HRD3YLR207W SPC105P53148 917 aa2.88□□□□□ -1.95
HRD3YLR207W TNA1P53322 534 aa2.88□□□□□ -1.95
HRD3YLR207W GPM1P00950 247 aaKnown RBP2.87□□□□□ -1.95
HRD3YLR207W SMY2P32909 740 aaKnown RBP2.87□□□□□ -1.95
HRD3YLR207W SPC29P33419 253 aa2.87□□□□□ -1.95
HRD3YLR207W YEL1P34225 687 aa2.87□□□□□ -1.95
HRD3YLR207W TRZ1P36159 838 aaPredicted RBP2.87□□□□□ -1.95
HRD3YLR207W RPN10P38886 268 aaKnown RBP2.87□□□□□ -1.95
HRD3YLR207W RPN3P40016 523 aaKnown RBP2.87□□□□□ -1.95
HRD3YLR207W YIR007WP40566 764 aa2.87□□□□□ -1.95
HRD3YLR207W PIP2P52960 996 aa2.87□□□□□ -1.95
HRD3YLR207W GPG1P53130 126 aa2.87□□□□□ -1.95
HRD3YLR207W CAF120P53836 1060 aa2.87□□□□□ -1.95
HRD3YLR207W MDM1Q01846 1127 aa2.87□□□□□ -1.95
HRD3YLR207W HOS3Q02959 697 aaKnown RBP2.87□□□□□ -1.95
HRD3YLR207W TPP1Q03796 238 aa2.87□□□□□ -1.95
HRD3YLR207W YPR196WQ06595 470 aa2.87□□□□□ -1.95
HRD3YLR207W GUD1Q07729 489 aa2.87□□□□□ -1.95
HRD3YLR207W CDC9P04819 755 aa2.87□□□□□ -1.95
HRD3YLR207W SRD1P09007 221 aa2.87□□□□□ -1.95
HRD3YLR207W MET22P32179 357 aa2.87□□□□□ -1.95
HRD3YLR207W PLC1P32383 869 aa2.87□□□□□ -1.95
HRD3YLR207W PRP19P32523 503 aaKnown RBP2.87□□□□□ -1.95
HRD3YLR207W BLI1P35727 113 aa2.87□□□□□ -1.95
HRD3YLR207W YBR238CP38330 731 aaKnown RBP2.87□□□□□ -1.95
HRD3YLR207W TOK1P40310 691 aa2.87□□□□□ -1.95
HRD3YLR207W YNL034WP53963 612 aa2.87□□□□□ -1.95
HRD3YLR207W YNL018CP53976 612 aa2.87□□□□□ -1.95
HRD3YLR207W MET14Q02196 202 aa2.87□□□□□ -1.95
HRD3YLR207W RSB1Q08417 382 aa2.87□□□□□ -1.95
HRD3YLR207W CHC1P22137 1653 aaKnown RBP2.86□□□□□ -1.95
HRD3YLR207W PIF1P07271 859 aa2.86□□□□□ -1.95
HRD3YLR207W RFA1P22336 621 aaKnown RBP2.86□□□□□ -1.95
HRD3YLR207W GBP2P25555 427 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
HRD3YLR207W PTP2P29461 750 aa2.86□□□□□ -1.95
HRD3YLR207W CDC12P32468 407 aaKnown RBP2.86□□□□□ -1.95
HRD3YLR207W UGA2P38067 497 aa2.86□□□□□ -1.95
HRD3YLR207W CCZ1P38273 704 aa2.86□□□□□ -1.95
HRD3YLR207W IES5P40060 125 aa2.86□□□□□ -1.95
HRD3YLR207W YJL045WP47052 634 aa2.86□□□□□ -1.95
HRD3YLR207W COG8Q04632 607 aa2.86□□□□□ -1.95
HRD3YLR207W REH1Q06709 432 aa2.86□□□□□ -1.95
HRD3YLR207W VMR1P38735 1592 aa2.86□□□□□ -1.95
HRD3YLR207W SFL1P20134 766 aa2.86□□□□□ -1.95
HRD3YLR207W YKL133CP36066 463 aa2.86□□□□□ -1.95
HRD3YLR207W GPT2P36148 743 aa2.86□□□□□ -1.95
HRD3YLR207W RRM3P38766 723 aa2.86□□□□□ -1.95
HRD3YLR207W NMD3P38861 518 aaKnown RBP2.86□□□□□ -1.95
HRD3YLR207W SEC26P41810 973 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms