RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C KCS1Q12494 1050 aa5.58□□□□□ -1.52
SMD3YLR147C STE14P32584 239 aa5.57□□□□□ -1.52
SMD3YLR147C RPN4Q03465 531 aa5.57□□□□□ -1.52
SMD3YLR147C GAL11P19659 1081 aa5.56□□□□□ -1.52
SMD3YLR147C RFA1P22336 621 aaKnown RBP5.56□□□□□ -1.52
SMD3YLR147C RPD3P32561 433 aa5.56□□□□□ -1.52
SMD3YLR147C BUD6P41697 788 aa5.56□□□□□ -1.52
SMD3YLR147C EXG2P52911 562 aa5.56□□□□□ -1.52
SMD3YLR147C DCG1P32460 244 aa5.55□□□□□ -1.52
SMD3YLR147C YKL091CP33324 310 aaKnown RBP5.55□□□□□ -1.52
SMD3YLR147C NPC2Q12408 173 aa5.55□□□□□ -1.52
SMD3YLR147C TOM70P07213 617 aaKnown RBP5.54□□□□□ -1.52
SMD3YLR147C URA1P28272 314 aaPredicted RBP5.54□□□□□ -1.52
SMD3YLR147C PBP2P38151 413 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SMD3YLR147C GYP8P43570 497 aa5.54□□□□□ -1.52
SMD3YLR147C YGR283CP53336 341 aaPredicted RBP5.54□□□□□ -1.52
SMD3YLR147C YKR011CQ02209 353 aa5.54□□□□□ -1.52
SMD3YLR147C YOR131CQ12486 218 aa5.54□□□□□ -1.52
SMD3YLR147C PMA1P05030 918 aaKnown RBP5.53□□□□□ -1.52
SMD3YLR147C MPH2P0CD99 609 aa5.53□□□□□ -1.52
SMD3YLR147C ERR1P0CX10 437 aa5.53□□□□□ -1.52
SMD3YLR147C ERR2P0CX11 437 aa5.53□□□□□ -1.52
SMD3YLR147C EMC3P36039 253 aa5.53□□□□□ -1.52
SMD3YLR147C CHZ1P40019 153 aaPredicted RBP5.53□□□□□ -1.52
SMD3YLR147C CEP3P40969 608 aa5.53□□□□□ -1.52
SMD3YLR147C PHO23P50947 330 aa5.53□□□□□ -1.52
SMD3YLR147C VPS30Q02948 557 aa5.53□□□□□ -1.52
SMD3YLR147C LAS17Q12446 633 aa5.53□□□□□ -1.52
SMD3YLR147C SED4P25365 1065 aa5.52□□□□□ -1.53
SMD3YLR147C TYE7P33122 291 aaPredicted RBP5.52□□□□□ -1.53
SMD3YLR147C YIL108WP40483 696 aaKnown RBP5.52□□□□□ -1.53
SMD3YLR147C ALG2P43636 503 aa5.52□□□□□ -1.53
SMD3YLR147C SLU7Q02775 382 aaKnown RBP5.52□□□□□ -1.53
SMD3YLR147C HCM1P25364 564 aa5.51□□□□□ -1.53
SMD3YLR147C KAR4P25583 335 aa5.51□□□□□ -1.53
SMD3YLR147C CTF8P38877 133 aa5.51□□□□□ -1.53
SMD3YLR147C SDP1P40479 209 aa5.51□□□□□ -1.53
SMD3YLR147C NTO1Q12311 748 aa5.51□□□□□ -1.53
SMD3YLR147C TIM23P32897 222 aa5.5□□□□□ -1.53
SMD3YLR147C GDH3P39708 457 aa5.5□□□□□ -1.53
SMD3YLR147C TY4A-JP47023 414 aa5.5□□□□□ -1.53
SMD3YLR147C MAL11P53048 616 aa5.5□□□□□ -1.53
SMD3YLR147C NOG2P53742 486 aaKnown RBP5.5□□□□□ -1.53
SMD3YLR147C GUP2Q08929 609 aa5.5□□□□□ -1.53
SMD3YLR147C PHR1P05066 565 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
SMD3YLR147C CIT2P08679 460 aa5.49□□□□□ -1.53
SMD3YLR147C DAL7P21826 554 aa5.49□□□□□ -1.53
SMD3YLR147C CYS3P31373 394 aaKnown RBP5.49□□□□□ -1.53
SMD3YLR147C NIT3P49954 291 aa5.49□□□□□ -1.53
SMD3YLR147C DAM1P53267 343 aa5.49□□□□□ -1.53
SMD3YLR147C ENB1Q08299 606 aa5.49□□□□□ -1.53
SMD3YLR147C YTA7P40340 1379 aa5.49□□□□□ -1.53
SMD3YLR147C RPS9AO13516 197 aaKnown RBP5.48□□□□□ -1.53
SMD3YLR147C YCL002CP25565 263 aa5.48□□□□□ -1.53
SMD3YLR147C SEC21P32074 935 aaKnown RBP5.48□□□□□ -1.53
SMD3YLR147C SPC29P33419 253 aa5.48□□□□□ -1.53
SMD3YLR147C TRM2P33753 639 aa5.48□□□□□ -1.53
SMD3YLR147C NUP82P40368 713 aa5.48□□□□□ -1.53
SMD3YLR147C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
SMD3YLR147C ATP25Q03153 612 aa5.48□□□□□ -1.53
SMD3YLR147C LRS4Q04087 347 aaKnown RBP5.48□□□□□ -1.53
SMD3YLR147C PFK1P16861 987 aaKnown RBP5.47□□□□□ -1.53
SMD3YLR147C DEF1P35732 738 aaKnown RBP5.47□□□□□ -1.53
SMD3YLR147C TAD1P53065 400 aa5.47□□□□□ -1.53
SMD3YLR147C MET7Q08645 548 aa5.47□□□□□ -1.53
SMD3YLR147C HAL9Q12180 1030 aa5.47□□□□□ -1.53
SMD3YLR147C TUB3P09734 445 aaKnown RBP5.46□□□□□ -1.54
SMD3YLR147C RAD53P22216 821 aa5.46□□□□□ -1.54
SMD3YLR147C BUL1P48524 976 aa5.46□□□□□ -1.54
SMD3YLR147C HSV2P50079 448 aaPredicted RBP5.46□□□□□ -1.54
SMD3YLR147C ERG5P54781 538 aa5.46□□□□□ -1.54
SMD3YLR147C TUB2P02557 457 aaKnown RBP5.45□□□□□ -1.54
SMD3YLR147C PMI40P29952 429 aaKnown RBP5.45□□□□□ -1.54
SMD3YLR147C YHR078WP38799 552 aa5.45□□□□□ -1.54
SMD3YLR147C MSS4P38994 779 aa5.45□□□□□ -1.54
SMD3YLR147C HXT16P47185 567 aa5.45□□□□□ -1.54
SMD3YLR147C SUN4P53616 420 aa5.45□□□□□ -1.54
SMD3YLR147C DUS1P53759 423 aaKnown RBP5.45□□□□□ -1.54
SMD3YLR147C YDR514CQ04408 483 aa5.45□□□□□ -1.54
SMD3YLR147C REH1Q06709 432 aa5.45□□□□□ -1.54
SMD3YLR147C YOR022CQ12204 715 aa5.45□□□□□ -1.54
SMD3YLR147C PRP4P20053 465 aaKnown RBP5.44□□□□□ -1.54
SMD3YLR147C CAD1P24813 409 aaKnown RBP5.44□□□□□ -1.54
SMD3YLR147C PUS2P53167 370 aa5.44□□□□□ -1.54
SMD3YLR147C GSF2Q04697 403 aaKnown RBP5.44□□□□□ -1.54
SMD3YLR147C PUS9Q12069 462 aa5.44□□□□□ -1.54
SMD3YLR147C PHO8P11491 566 aa5.43□□□□□ -1.54
SMD3YLR147C PEX19Q07418 342 aa5.43□□□□□ -1.54
SMD3YLR147C THI21Q08975 551 aa5.43□□□□□ -1.54
SMD3YLR147C YLR125WQ12138 136 aa5.43□□□□□ -1.54
SMD3YLR147C YBR182C-AQ8TGU6 64 aa5.43□□□□□ -1.54
SMD3YLR147C PER1P25625 357 aa5.42□□□□□ -1.54
SMD3YLR147C HRR25P29295 494 aaKnown RBP5.42□□□□□ -1.54
SMD3YLR147C KIN4Q01919 800 aa5.42□□□□□ -1.54
SMD3YLR147C SWM1Q12379 170 aa5.42□□□□□ -1.54
SMD3YLR147C MDM12Q92328 271 aa5.42□□□□□ -1.54
SMD3YLR147C PRC1P00729 532 aa5.41□□□□□ -1.54
SMD3YLR147C MTC2P34246 357 aa5.41□□□□□ -1.54
SMD3YLR147C CTF13P35203 478 aa5.41□□□□□ -1.54
SMD3YLR147C MSE1P48525 536 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 102.4 ms