RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C RFA1P22336 621 aaKnown RBP4.06□□□□□ -1.76
AFB1YLR040C STE11P23561 717 aa4.06□□□□□ -1.76
AFB1YLR040C ATG19P35193 415 aa4.06□□□□□ -1.76
AFB1YLR040C NPC2Q12408 173 aa4.06□□□□□ -1.76
AFB1YLR040C TOM70P07213 617 aaKnown RBP4.05□□□□□ -1.76
AFB1YLR040C ERR1P0CX10 437 aa4.05□□□□□ -1.76
AFB1YLR040C ERR2P0CX11 437 aa4.05□□□□□ -1.76
AFB1YLR040C DCG1P32460 244 aa4.05□□□□□ -1.76
AFB1YLR040C YKL091CP33324 310 aaKnown RBP4.05□□□□□ -1.76
AFB1YLR040C GGA2P38817 585 aaKnown RBP4.05□□□□□ -1.76
AFB1YLR040C YIL108WP40483 696 aaKnown RBP4.05□□□□□ -1.76
AFB1YLR040C EXG2P52911 562 aa4.05□□□□□ -1.76
AFB1YLR040C YGR283CP53336 341 aaPredicted RBP4.05□□□□□ -1.76
AFB1YLR040C YKR011CQ02209 353 aa4.05□□□□□ -1.76
AFB1YLR040C SLU7Q02775 382 aaKnown RBP4.05□□□□□ -1.76
AFB1YLR040C LAS17Q12446 633 aa4.05□□□□□ -1.76
AFB1YLR040C PMA1P05030 918 aaKnown RBP4.04□□□□□ -1.76
AFB1YLR040C RPP2AP05319 106 aaKnown RBP4.04□□□□□ -1.76
AFB1YLR040C HCM1P25364 564 aa4.04□□□□□ -1.76
AFB1YLR040C SED4P25365 1065 aa4.04□□□□□ -1.76
AFB1YLR040C KAR4P25583 335 aa4.04□□□□□ -1.76
AFB1YLR040C URA1P28272 314 aaPredicted RBP4.04□□□□□ -1.76
AFB1YLR040C BUD6P41697 788 aa4.04□□□□□ -1.76
AFB1YLR040C GYP8P43570 497 aa4.04□□□□□ -1.76
AFB1YLR040C VPS30Q02948 557 aa4.04□□□□□ -1.76
AFB1YLR040C RPN4Q03465 531 aa4.04□□□□□ -1.76
AFB1YLR040C NTO1Q12311 748 aa4.04□□□□□ -1.76
AFB1YLR040C PHR1P05066 565 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
AFB1YLR040C MPH2P0CD99 609 aa4.03□□□□□ -1.76
AFB1YLR040C GAL11P19659 1081 aa4.03□□□□□ -1.76
AFB1YLR040C DAL7P21826 554 aa4.03□□□□□ -1.76
AFB1YLR040C YCL002CP25565 263 aa4.03□□□□□ -1.76
AFB1YLR040C TYE7P33122 291 aaPredicted RBP4.03□□□□□ -1.76
AFB1YLR040C TY4A-JP47023 414 aa4.03□□□□□ -1.76
AFB1YLR040C YOR131CQ12486 218 aa4.03□□□□□ -1.76
AFB1YLR040C CYS3P31373 394 aaKnown RBP4.02□□□□□ -1.77
AFB1YLR040C EMC3P36039 253 aa4.02□□□□□ -1.77
AFB1YLR040C PBP2P38151 413 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
AFB1YLR040C CHZ1P40019 153 aaPredicted RBP4.02□□□□□ -1.77
AFB1YLR040C SDP1P40479 209 aa4.02□□□□□ -1.77
AFB1YLR040C RPS9AO13516 197 aaKnown RBP4.01□□□□□ -1.77
AFB1YLR040C TUB2P02557 457 aaKnown RBP4.01□□□□□ -1.77
AFB1YLR040C PFK1P16861 987 aaKnown RBP4.01□□□□□ -1.77
AFB1YLR040C SEC21P32074 935 aaKnown RBP4.01□□□□□ -1.77
AFB1YLR040C TIM23P32897 222 aa4.01□□□□□ -1.77
AFB1YLR040C CTF8P38877 133 aa4.01□□□□□ -1.77
AFB1YLR040C MSS4P38994 779 aa4.01□□□□□ -1.77
AFB1YLR040C GDH3P39708 457 aa4.01□□□□□ -1.77
AFB1YLR040C ALG2P43636 503 aa4.01□□□□□ -1.77
AFB1YLR040C NIT3P49954 291 aa4.01□□□□□ -1.77
AFB1YLR040C MAL11P53048 616 aa4.01□□□□□ -1.77
AFB1YLR040C TAD1P53065 400 aa4.01□□□□□ -1.77
AFB1YLR040C NOG2P53742 486 aaKnown RBP4.01□□□□□ -1.77
AFB1YLR040C LRS4Q04087 347 aaKnown RBP4.01□□□□□ -1.77
AFB1YLR040C CIT2P08679 460 aa4□□□□□ -1.77
AFB1YLR040C CAD1P24813 409 aaKnown RBP4□□□□□ -1.77
AFB1YLR040C SCT1P32784 759 aa4□□□□□ -1.77
AFB1YLR040C TRM2P33753 639 aa4□□□□□ -1.77
AFB1YLR040C DEF1P35732 738 aaKnown RBP4□□□□□ -1.77
AFB1YLR040C NUP82P40368 713 aa4□□□□□ -1.77
AFB1YLR040C DAM1P53267 343 aa4□□□□□ -1.77
AFB1YLR040C SUN4P53616 420 aa4□□□□□ -1.77
AFB1YLR040C GUP2Q08929 609 aa4□□□□□ -1.77
AFB1YLR040C HAL9Q12180 1030 aa4□□□□□ -1.77
AFB1YLR040C YOR022CQ12204 715 aa4□□□□□ -1.77
AFB1YLR040C PRP4P20053 465 aaKnown RBP3.99□□□□□ -1.77
AFB1YLR040C RAD53P22216 821 aa3.99□□□□□ -1.77
AFB1YLR040C SPC29P33419 253 aa3.99□□□□□ -1.77
AFB1YLR040C BUL1P48524 976 aa3.99□□□□□ -1.77
AFB1YLR040C HSV2P50079 448 aaPredicted RBP3.99□□□□□ -1.77
AFB1YLR040C ATP25Q03153 612 aa3.99□□□□□ -1.77
AFB1YLR040C ENB1Q08299 606 aa3.99□□□□□ -1.77
AFB1YLR040C MET7Q08645 548 aa3.99□□□□□ -1.77
AFB1YLR040C TUB3P09734 445 aaKnown RBP3.98□□□□□ -1.77
AFB1YLR040C YHR078WP38799 552 aa3.98□□□□□ -1.77
AFB1YLR040C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
AFB1YLR040C HXT16P47185 567 aa3.98□□□□□ -1.77
AFB1YLR040C PUS2P53167 370 aa3.98□□□□□ -1.77
AFB1YLR040C SLI1P53304 468 aa3.98□□□□□ -1.77
AFB1YLR040C DUS1P53759 423 aaKnown RBP3.98□□□□□ -1.77
AFB1YLR040C ERG5P54781 538 aa3.98□□□□□ -1.77
AFB1YLR040C KIN4Q01919 800 aa3.98□□□□□ -1.77
AFB1YLR040C YDR514CQ04408 483 aa3.98□□□□□ -1.77
AFB1YLR040C PEX19Q07418 342 aa3.98□□□□□ -1.77
AFB1YLR040C PUS9Q12069 462 aa3.98□□□□□ -1.77
AFB1YLR040C TRM13Q12383 476 aa3.98□□□□□ -1.77
AFB1YLR040C PER1P25625 357 aa3.97□□□□□ -1.77
AFB1YLR040C HRR25P29295 494 aaKnown RBP3.97□□□□□ -1.77
AFB1YLR040C PMI40P29952 429 aaKnown RBP3.97□□□□□ -1.77
AFB1YLR040C MSE1P48525 536 aa3.97□□□□□ -1.77
AFB1YLR040C PRC1P00729 532 aa3.96□□□□□ -1.78
AFB1YLR040C PHO8P11491 566 aa3.96□□□□□ -1.78
AFB1YLR040C VHR1P40522 640 aa3.96□□□□□ -1.78
AFB1YLR040C SSY5P47002 699 aa3.96□□□□□ -1.78
AFB1YLR040C GSF2Q04697 403 aaKnown RBP3.96□□□□□ -1.78
AFB1YLR040C RSC3Q06639 885 aa3.96□□□□□ -1.78
AFB1YLR040C REH1Q06709 432 aa3.96□□□□□ -1.78
AFB1YLR040C AIM39Q08223 395 aa3.96□□□□□ -1.78
AFB1YLR040C SWM1Q12379 170 aa3.96□□□□□ -1.78
AFB1YLR040C YBR182C-AQ8TGU6 64 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms