RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W SQT1P35184 431 aa3.97□□□□□ -1.77
CAF130YGR134W FAT1P38225 669 aa3.97□□□□□ -1.77
CAF130YGR134W RAT1Q02792 1006 aaKnown RBP3.97□□□□□ -1.77
CAF130YGR134W ARP9Q05123 467 aa3.97□□□□□ -1.77
CAF130YGR134W YCF1P39109 1515 aaKnown RBP3.96□□□□□ -1.77
CAF130YGR134W TY1A-LR4P0C2I8 440 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W TY1A-DR6P0CX70 440 aa3.96□□□□□ -1.78
CAF130YGR134W TY1A-ER1P0CX71 440 aa3.96□□□□□ -1.78
CAF130YGR134W TY1A-LR2P0CX72 440 aa3.96□□□□□ -1.78
CAF130YGR134W TY1A-PLP0CX73 440 aa3.96□□□□□ -1.78
CAF130YGR134W TY1A-JR1P0CX74 440 aa3.96□□□□□ -1.78
CAF130YGR134W TY1A-LR3P0CX75 440 aa3.96□□□□□ -1.78
CAF130YGR134W TY1A-ML2P0CX76 440 aa3.96□□□□□ -1.78
CAF130YGR134W REC107P21651 314 aa3.96□□□□□ -1.78
CAF130YGR134W YKL151CP36059 337 aa3.96□□□□□ -1.78
CAF130YGR134W YIL165CP40446 119 aa3.96□□□□□ -1.78
CAF130YGR134W TAD1P53065 400 aa3.96□□□□□ -1.78
CAF130YGR134W PIL1P53252 339 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W YGR283CP53336 341 aaPredicted RBP3.96□□□□□ -1.78
CAF130YGR134W PRO2P54885 456 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W FDC1Q03034 503 aa3.96□□□□□ -1.78
CAF130YGR134W YOR296WQ08748 1289 aa3.96□□□□□ -1.78
CAF130YGR134W TY1A-GR1Q12085 440 aa3.96□□□□□ -1.78
CAF130YGR134W RKM4Q12504 494 aa3.96□□□□□ -1.78
CAF130YGR134W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W TY1A-OLQ92392 440 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W TRM732Q03496 1420 aa3.96□□□□□ -1.78
CAF130YGR134W SWI6P09959 803 aa3.96□□□□□ -1.78
CAF130YGR134W CDC26P14724 124 aa3.96□□□□□ -1.78
CAF130YGR134W CMP2P14747 604 aa3.96□□□□□ -1.78
CAF130YGR134W OLE1P21147 510 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W DBP2P24783 546 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W DYS1P38791 387 aa3.96□□□□□ -1.78
CAF130YGR134W NPR2P39923 615 aa3.96□□□□□ -1.78
CAF130YGR134W TMA108P40462 946 aa3.96□□□□□ -1.78
CAF130YGR134W MDE1P47095 244 aa3.96□□□□□ -1.78
CAF130YGR134W CPR6P53691 371 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W ATP25Q03153 612 aa3.96□□□□□ -1.78
CAF130YGR134W TOP2P06786 1428 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W YER152CP10356 443 aa3.96□□□□□ -1.78
CAF130YGR134W INO1P11986 533 aa3.96□□□□□ -1.78
CAF130YGR134W NPP1P25353 742 aa3.96□□□□□ -1.78
CAF130YGR134W CDC60P26637 1090 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W MRT4P33201 236 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W PIN4P34217 668 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
CAF130YGR134W LDH1P38139 375 aa3.96□□□□□ -1.78
CAF130YGR134W CCT3P39077 534 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W VMA13P41807 478 aaKnown RBP3.96□□□□□ -1.78
CAF130YGR134W SIP4P46954 829 aa3.96□□□□□ -1.78
CAF130YGR134W RAD17P48581 401 aa3.96□□□□□ -1.78
CAF130YGR134W KXD1P53158 218 aa3.96□□□□□ -1.78
CAF130YGR134W FRK1Q03002 865 aaPredicted RBP3.96□□□□□ -1.78
CAF130YGR134W TY1A-DR3Q12441 440 aa3.96□□□□□ -1.78
CAF130YGR134W SEM1O94742 89 aa3.95□□□□□ -1.78
CAF130YGR134W HMG1P12683 1054 aa3.95□□□□□ -1.78
CAF130YGR134W PRP9P19736 530 aaKnown RBP3.95□□□□□ -1.78
CAF130YGR134W TFB1P32776 642 aa3.95□□□□□ -1.78
CAF130YGR134W SEC27P41811 889 aaKnown RBP3.95□□□□□ -1.78
CAF130YGR134W PML39Q03760 334 aa3.95□□□□□ -1.78
CAF130YGR134W WTM2Q12206 467 aa3.95□□□□□ -1.78
CAF130YGR134W TY2B-BQ12491 1770 aa3.95□□□□□ -1.78
CAF130YGR134W IKI3Q06706 1349 aaKnown RBP3.95□□□□□ -1.78
CAF130YGR134W UTR2P32623 467 aa3.95□□□□□ -1.78
CAF130YGR134W JNM1P36224 373 aa3.95□□□□□ -1.78
CAF130YGR134W YBR284WP38150 797 aa3.95□□□□□ -1.78
CAF130YGR134W YBL086CP38177 466 aa3.95□□□□□ -1.78
CAF130YGR134W GIP1P38229 639 aa3.95□□□□□ -1.78
CAF130YGR134W RIM4P38741 713 aa3.95□□□□□ -1.78
CAF130YGR134W YKE2P52553 114 aa3.95□□□□□ -1.78
CAF130YGR134W SPO71Q03868 1245 aa3.95□□□□□ -1.78
CAF130YGR134W PMT7Q06644 662 aa3.95□□□□□ -1.78
CAF130YGR134W CEX1Q12453 761 aa3.95□□□□□ -1.78
CAF130YGR134W BPT1P14772 1559 aa3.95□□□□□ -1.78
CAF130YGR134W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
CAF130YGR134W RPL19AP0CX82 189 aaKnown RBP3.94□□□□□ -1.78
CAF130YGR134W RPL19BP0CX83 189 aaPredicted RBP3.94□□□□□ -1.78
CAF130YGR134W IDI1P15496 288 aa3.94□□□□□ -1.78
CAF130YGR134W SNT1P25357 1226 aa3.94□□□□□ -1.78
CAF130YGR134W PSY4P38193 441 aa3.94□□□□□ -1.78
CAF130YGR134W LAM1P38851 1228 aa3.94□□□□□ -1.78
CAF130YGR134W GEM1P39722 662 aa3.94□□□□□ -1.78
CAF130YGR134W FMP10P40098 244 aa3.94□□□□□ -1.78
CAF130YGR134W ROG3P43602 733 aa3.94□□□□□ -1.78
CAF130YGR134W YGL176CP46945 554 aa3.94□□□□□ -1.78
CAF130YGR134W ENV11P53246 860 aa3.94□□□□□ -1.78
CAF130YGR134W JIP4Q03361 876 aa3.94□□□□□ -1.78
CAF130YGR134W YLH47Q06493 454 aa3.94□□□□□ -1.78
CAF130YGR134W AOS1Q06624 347 aa3.94□□□□□ -1.78
CAF130YGR134W YDL124WQ07551 312 aaKnown RBP3.94□□□□□ -1.78
CAF130YGR134W IOC2Q12072 812 aa3.94□□□□□ -1.78
CAF130YGR134W Q0182Q9ZZW1 134 aa3.94□□□□□ -1.78
CAF130YGR134W SNQ2P32568 1501 aaKnown RBP3.94□□□□□ -1.78
CAF130YGR134W DBP5P20449 482 aaKnown RBP3.94□□□□□ -1.78
CAF130YGR134W PRP19P32523 503 aaKnown RBP3.94□□□□□ -1.78
CAF130YGR134W ECM2P38241 364 aaKnown RBP3.94□□□□□ -1.78
CAF130YGR134W AIM14P53109 570 aa3.94□□□□□ -1.78
CAF130YGR134W NCE103P53615 221 aa3.94□□□□□ -1.78
CAF130YGR134W PEX15Q08215 383 aa3.94□□□□□ -1.78
CAF130YGR134W RRP43P25359 394 aaPredicted RBP3.94□□□□□ -1.78
CAF130YGR134W YBR225WP38321 900 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms