RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	CIK1	Q01649	594 aa		5.79	□□□□□ -1.48
VTC2	YFL004W	RPL24A	P04449	155 aa	Known RBP	5.78	□□□□□ -1.48
VTC2	YFL004W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
VTC2	YFL004W	FAR1	P21268	830 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	SPS22	P25380	463 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	ADY2	P25613	283 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	ATG14	P38270	344 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	BIM1	P40013	344 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	CST6	P40535	587 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	ZDS2	P54786	942 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	SHE9	Q04172	456 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	GTB1	Q04924	702 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	RRP9	Q06506	573 aa	Known RBP	5.78	□□□□□ -1.48
VTC2	YFL004W	DNL4	Q08387	944 aa	Predicted RBP	5.78	□□□□□ -1.48
VTC2	YFL004W	GET4	Q12125	312 aa		5.78	□□□□□ -1.48
VTC2	YFL004W	HTZ1	Q12692	134 aa	Known RBP	5.78	□□□□□ -1.48
VTC2	YFL004W	VPS1	P21576	704 aa	Known RBP	5.77	□□□□□ -1.48
VTC2	YFL004W	BUD23	P25627	275 aa	Predicted RBP	5.77	□□□□□ -1.48
VTC2	YFL004W	MLS1	P30952	554 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	SLA1	P32790	1244 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	MRE11	P32829	692 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	HSP78	P33416	811 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	YKR015C	P36111	568 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.48	RIP-Chip
VTC2	YFL004W	HSM3	P38348	480 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	PEX18	P38855	283 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	SAK1	P38990	1142 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	ALG5	P40350	334 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	RPL34B	P40525	121 aa	Known RBP	5.77	□□□□□ -1.48
VTC2	YFL004W	NOP9	P47077	666 aa	Known RBP	5.77	□□□□□ -1.48
VTC2	YFL004W	COP1	P53622	1201 aa	Known RBP	5.77	□□□□□ -1.48
VTC2	YFL004W	CWC15	Q03772	175 aa	Known RBP	5.77	□□□□□ -1.48
VTC2	YFL004W	SAM3	Q08986	587 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	CWC2	Q12046	339 aa	Predicted RBP	5.77	□□□□□ -1.48
VTC2	YFL004W	DAS2	Q12084	232 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	YOR111W	Q99210	232 aa		5.77	□□□□□ -1.48
VTC2	YFL004W	MPH3	P0CE00	602 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	PRP9	P19736	530 aa	Known RBP	5.77	□□□□□ -1.49
VTC2	YFL004W	OPI1	P21957	404 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	ITR2	P30606	609 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	TGL3	P40308	642 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	JEM1	P40358	645 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	ESBP6	P53918	673 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	CTF4	Q01454	927 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	RPM2	Q02773	1202 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	LGE1	Q02796	332 aa	Known RBP	5.77	□□□□□ -1.49
VTC2	YFL004W	YML020W	Q03722	664 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	YDR341C	Q05506	607 aa	Known RBP	5.77	□□□□□ -1.49
VTC2	YFL004W	SUB2	Q07478	446 aa	Known RBP	5.77	□□□□□ -1.49
VTC2	YFL004W	FRA1	Q07825	749 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	GET3	Q12154	354 aa	Known RBP	5.77	□□□□□ -1.49
VTC2	YFL004W	GYP5	Q12344	894 aa		5.77	□□□□□ -1.49
VTC2	YFL004W	THR1	P17423	357 aa	Known RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	MCM3	P24279	971 aa	Known RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	YBL055C	P34220	418 aa	Predicted RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	UTP11	P34247	250 aa	Predicted RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	JNM1	P36224	373 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	YDR179W-A	Q03983	463 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	ECI1	Q05871	280 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	VIP1	Q06685	1146 aa	Known RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	SPO21	Q12411	609 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	ZRT2	Q12436	422 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	ADR1	P07248	1323 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	SSK22	P25390	1331 aa	Predicted RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	CDC6	P09119	513 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	EFT1	P32324	842 aa	Known RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	AST1	P35183	429 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	RPC25	P35718	212 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	ERP5	P38819	212 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	SET5	P38890	526 aa	Known RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	POL31	P46957	487 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	NOP15	P53927	220 aa	Predicted RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	YMR111C	Q04461	462 aa	Predicted RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	DON1	Q05610	365 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	PNP1	Q05788	311 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	YPQ2	Q06328	317 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	RUP1	Q12242	671 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	SCM3	Q12334	223 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	SEY1	Q99287	776 aa		5.76	□□□□□ -1.49
VTC2	YFL004W	FAS2	P19097	1887 aa	Known RBP	5.76	□□□□□ -1.49
VTC2	YFL004W	SUP45	P12385	437 aa	Known RBP	5.75	□□□□□ -1.49
VTC2	YFL004W	CNA1	P23287	553 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	NIP100	P33420	868 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	OCT1	P35999	772 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	RRD1	P40454	393 aa	Known RBP	5.75	□□□□□ -1.49
VTC2	YFL004W	IRR1	P40541	1150 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	YGL176C	P46945	554 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	FMP33	P46998	180 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	BNI4	P53858	892 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
VTC2	YFL004W	YML082W	Q04533	649 aa	Known RBP	5.75	□□□□□ -1.49
VTC2	YFL004W	SIL1	Q08199	421 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	TAF3	Q12297	353 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	SEC63	P14906	663 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	SSA4	P22202	642 aa	Known RBP	5.75	□□□□□ -1.49
VTC2	YFL004W	CLB2	P24869	491 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	YME1	P32795	747 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	GRX7	P38068	203 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	TBS1	P38114	1094 aa		5.75	□□□□□ -1.49
VTC2	YFL004W	SSZ1	P38788	538 aa	Known RBP	5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 66.4 ms