RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W TFB3Q03290 321 aa8.12□□□□□ -1.11
YRF1-1YDR545W ADF1Q2V2Q1 113 aa8.12□□□□□ -1.11
YRF1-1YDR545W ALG1P16661 449 aa8.12□□□□□ -1.11
YRF1-1YDR545W PLC1P32383 869 aa8.12□□□□□ -1.11
YRF1-1YDR545W YJR008WP47085 338 aa8.12□□□□□ -1.11
YRF1-1YDR545W YGR021WP53212 290 aa8.12□□□□□ -1.11
YRF1-1YDR545W YMR018WQ04364 514 aa8.12□□□□□ -1.11
YRF1-1YDR545W SLM3Q12093 417 aa8.12□□□□□ -1.11
YRF1-1YDR545W TAF3Q12297 353 aa8.12□□□□□ -1.11
YRF1-1YDR545W AI2P03876 854 aa8.12□□□□□ -1.11
YRF1-1YDR545W RPL6BP05739 176 aaKnown RBP8.12□□□□□ -1.11
YRF1-1YDR545W AIP1P46680 615 aaKnown RBP8.12□□□□□ -1.11
YRF1-1YDR545W TAF9Q05027 157 aa8.12□□□□□ -1.11
YRF1-1YDR545W BLI1P35727 113 aa8.11□□□□□ -1.11
YRF1-1YDR545W UBP2Q01476 1272 aa8.11□□□□□ -1.11
YRF1-1YDR545W DBP10Q12389 995 aaKnown RBP8.11□□□□□ -1.11
YRF1-1YDR545W ARG82P07250 355 aa8.11□□□□□ -1.11
YRF1-1YDR545W SCJ1P25303 377 aa8.11□□□□□ -1.11
YRF1-1YDR545W HXT1P32465 570 aa8.11□□□□□ -1.11
YRF1-1YDR545W ADE12P80210 433 aaKnown RBP8.11□□□□□ -1.11
YRF1-1YDR545W TFC6Q06339 672 aa8.11□□□□□ -1.11
YRF1-1YDR545W YOR111WQ99210 232 aa8.11□□□□□ -1.11
YRF1-1YDR545W TUS1Q06412 1307 aa8.11□□□□□ -1.11
YRF1-1YDR545W CAB2P40506 365 aa8.11□□□□□ -1.11
YRF1-1YDR545W TOS3P43637 560 aa8.11□□□□□ -1.11
YRF1-1YDR545W MMT1Q03218 510 aa8.11□□□□□ -1.11
YRF1-1YDR545W YMR111CQ04461 462 aaPredicted RBP8.11□□□□□ -1.11
YRF1-1YDR545W DBP5P20449 482 aaKnown RBP8.11□□□□□ -1.11
YRF1-1YDR545W SMX2P40204 77 aaKnown RBP8.11□□□□□ -1.11
YRF1-1YDR545W FAP1P53971 965 aa8.11□□□□□ -1.11
YRF1-1YDR545W VPS1P21576 704 aaKnown RBP8.11□□□□□ -1.11
YRF1-1YDR545W HSM3P38348 480 aa8.11□□□□□ -1.11
YRF1-1YDR545W EMW1P42842 904 aaKnown RBP8.11□□□□□ -1.11
YRF1-1YDR545W SMC5Q08204 1093 aa8.11□□□□□ -1.11
YRF1-1YDR545W SNT1P25357 1226 aa8.1□□□□□ -1.11
YRF1-1YDR545W YGL176CP46945 554 aa8.1□□□□□ -1.11
YRF1-1YDR545W YMR226CQ05016 267 aaKnown RBP8.1□□□□□ -1.11
YRF1-1YDR545W SNA3P14359 133 aa8.1□□□□□ -1.11
YRF1-1YDR545W PEX5P35056 612 aa8.1□□□□□ -1.11
YRF1-1YDR545W PXL1P36166 706 aa8.1□□□□□ -1.11
YRF1-1YDR545W CDC27P38042 758 aa8.1□□□□□ -1.11
YRF1-1YDR545W UBX4P54730 416 aa8.1□□□□□ -1.11
YRF1-1YDR545W HXT10P43581 546 aa8.1□□□□□ -1.11
YRF1-1YDR545W HMO1Q03973 246 aaKnown RBP8.1□□□□□ -1.11
YRF1-1YDR545W KIP2P28743 706 aa8.1□□□□□ -1.11
YRF1-1YDR545W ERC1P38767 581 aa8.1□□□□□ -1.11
YRF1-1YDR545W FRT2P39734 528 aa8.1□□□□□ -1.11
YRF1-1YDR545W STB1P42845 420 aa8.1□□□□□ -1.11
YRF1-1YDR545W SQS1P53866 767 aaKnown RBP8.1□□□□□ -1.11
YRF1-1YDR545W SHC1P39000 512 aa8.09□□□□□ -1.11
YRF1-1YDR545W IOC3P43596 787 aa8.09□□□□□ -1.11
YRF1-1YDR545W BNI5P53890 448 aaKnown RBP8.09□□□□□ -1.11
YRF1-1YDR545W KTR5P53966 522 aaPredicted RBP8.09□□□□□ -1.11
YRF1-1YDR545W RPS15Q01855 142 aaKnown RBP8.09□□□□□ -1.11
YRF1-1YDR545W RPM2Q02773 1202 aa8.09□□□□□ -1.11
YRF1-1YDR545W ACL4Q03771 387 aa8.09□□□□□ -1.11
YRF1-1YDR545W ADY3Q07732 790 aa8.09□□□□□ -1.11
YRF1-1YDR545W INP54Q08227 384 aaKnown RBP8.09□□□□□ -1.11
YRF1-1YDR545W ENO1P00924 437 aaKnown RBP8.09□□□□□ -1.11
YRF1-1YDR545W AAD3P25612 363 aa8.09□□□□□ -1.11
YRF1-1YDR545W SEC6P32844 805 aa8.09□□□□□ -1.11
YRF1-1YDR545W AMN1P38285 549 aaPredicted RBP8.09□□□□□ -1.11
YRF1-1YDR545W MMM1P41800 426 aa8.09□□□□□ -1.11
YRF1-1YDR545W GGA1Q06336 557 aa8.09□□□□□ -1.11
YRF1-1YDR545W FIN1Q03898 291 aa8.09□□□□□ -1.11
YRF1-1YDR545W SIL1Q08199 421 aa8.09□□□□□ -1.11
YRF1-1YDR545W PCI8P40512 444 aa8.09□□□□□ -1.11
YRF1-1YDR545W SRL4Q03085 281 aa8.09□□□□□ -1.11
YRF1-1YDR545W YML082WQ04533 649 aaKnown RBP8.09□□□□□ -1.11
YRF1-1YDR545W SEC10Q06245 871 aa8.09□□□□□ -1.11
YRF1-1YDR545W DIM1P41819 318 aaKnown RBP8.08□□□□□ -1.12
YRF1-1YDR545W LAM5P43560 674 aa8.08□□□□□ -1.12
YRF1-1YDR545W NMD5P46970 1048 aa8.08□□□□□ -1.12
YRF1-1YDR545W OSW1Q08692 278 aa8.08□□□□□ -1.12
YRF1-1YDR545W APC1P53886 1748 aa8.08□□□□□ -1.12
YRF1-1YDR545W YCR016WP25617 290 aaKnown RBP8.08□□□□□ -1.12
YRF1-1YDR545W YLR462WO13556 202 aa8.08□□□□□ -1.12
YRF1-1YDR545W PRP9P19736 530 aaKnown RBP8.08□□□□□ -1.12
YRF1-1YDR545W URA4P20051 364 aa8.08□□□□□ -1.12
YRF1-1YDR545W YHL049CP38722 271 aa8.08□□□□□ -1.12
YRF1-1YDR545W YEL075CP39972 122 aa8.08□□□□□ -1.12
YRF1-1YDR545W YER189WP40104 122 aa8.08□□□□□ -1.12
YRF1-1YDR545W YFL064CP43540 174 aa8.08□□□□□ -1.12
YRF1-1YDR545W MAK10Q02197 733 aa8.08□□□□□ -1.12
YRF1-1YDR545W PTC5Q12511 572 aa8.08□□□□□ -1.12
YRF1-1YDR545W YBL111CQ3E7Y5 667 aa8.08□□□□□ -1.12
YRF1-1YDR545W SPS22P25380 463 aa8.08□□□□□ -1.12
YRF1-1YDR545W RTS1P38903 757 aa8.08□□□□□ -1.12
YRF1-1YDR545W ULP1Q02724 621 aa8.08□□□□□ -1.12
YRF1-1YDR545W YPT6Q99260 215 aa8.08□□□□□ -1.12
YRF1-1YDR545W YTA12P40341 825 aa8.07□□□□□ -1.12
YRF1-1YDR545W HXT8P40886 569 aa8.07□□□□□ -1.12
YRF1-1YDR545W MET6P05694 767 aaKnown RBP8.07□□□□□ -1.12
YRF1-1YDR545W RNR3P21672 869 aaKnown RBP8.07□□□□□ -1.12
YRF1-1YDR545W MRF1P30775 413 aaPredicted RBP8.07□□□□□ -1.12
YRF1-1YDR545W COY1P34237 679 aa8.07□□□□□ -1.12
YRF1-1YDR545W YKL050CP35736 922 aa8.07□□□□□ -1.12
YRF1-1YDR545W YHL008CP38750 627 aa8.07□□□□□ -1.12
YRF1-1YDR545W YOL075CQ08234 1294 aa8.07□□□□□ -1.12
YRF1-1YDR545W HES1P35843 434 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms