RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeastyeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOM1YDR457W PAC11P40960 533 aa2.89□□□□□ -1.95
TOM1YDR457W TUB4P53378 473 aa2.89□□□□□ -1.95
TOM1YDR457W RSA3Q05942 220 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W SSC1P0CS90 654 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W AEP2P22136 580 aa2.89□□□□□ -1.95
TOM1YDR457W PAC10P48363 199 aa2.89□□□□□ -1.95
TOM1YDR457W MSN5P52918 1224 aa2.89□□□□□ -1.95
TOM1YDR457W AAD16Q02895 342 aa2.89□□□□□ -1.95
TOM1YDR457W IWR1Q07532 353 aaPredicted RBP2.89□□□□□ -1.95
TOM1YDR457W YLL007CQ07799 665 aa2.89□□□□□ -1.95
TOM1YDR457W ENT4Q07872 247 aa2.89□□□□□ -1.95
TOM1YDR457W RSB1Q08417 382 aa2.89□□□□□ -1.95
TOM1YDR457W ATP16Q12165 160 aa2.89□□□□□ -1.95
TOM1YDR457W SNF1P06782 633 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W PMR1P13586 950 aa2.89□□□□□ -1.95
TOM1YDR457W PRP9P19736 530 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W RXT2P38255 430 aa2.89□□□□□ -1.95
TOM1YDR457W GVP36P40531 326 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W GIS4Q04233 774 aa2.89□□□□□ -1.95
TOM1YDR457W ARG7Q04728 441 aa2.89□□□□□ -1.95
TOM1YDR457W NUP145P49687 1317 aa2.89□□□□□ -1.95
TOM1YDR457W BNR1P40450 1375 aa2.89□□□□□ -1.95
TOM1YDR457W SIR3P06701 978 aa2.89□□□□□ -1.95
TOM1YDR457W KAR9P32526 644 aa2.89□□□□□ -1.95
TOM1YDR457W GLG1P36143 616 aa2.89□□□□□ -1.95
TOM1YDR457W MET1P36150 593 aa2.89□□□□□ -1.95
TOM1YDR457W SPF1P39986 1215 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W MNN11P46985 422 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W SOV1Q04748 898 aa2.89□□□□□ -1.95
TOM1YDR457W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
TOM1YDR457W SPE3Q12074 293 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W SKM1Q12469 655 aa2.89□□□□□ -1.95
TOM1YDR457W PTC5Q12511 572 aa2.89□□□□□ -1.95
TOM1YDR457W LAT1P12695 482 aaKnown RBP2.89□□□□□ -1.95
TOM1YDR457W CIN8P27895 1000 aa2.89□□□□□ -1.95
TOM1YDR457W YBR138CP38277 524 aa2.89□□□□□ -1.95
TOM1YDR457W PEP3P27801 918 aa2.88□□□□□ -1.95
TOM1YDR457W RPN2P32565 945 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W STE13P33894 931 aa2.88□□□□□ -1.95
TOM1YDR457W VPS51P36116 164 aa2.88□□□□□ -1.95
TOM1YDR457W YHL050CP38721 697 aa2.88□□□□□ -1.95
TOM1YDR457W CST6P40535 587 aa2.88□□□□□ -1.95
TOM1YDR457W EPL1P43572 832 aa2.88□□□□□ -1.95
TOM1YDR457W SNX4P47057 423 aa2.88□□□□□ -1.95
TOM1YDR457W SAP4P53036 818 aa2.88□□□□□ -1.95
TOM1YDR457W BUL2Q03758 920 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W RKM1Q08961 583 aaPredicted RBP2.88□□□□□ -1.95
TOM1YDR457W YEL077CQ3E7X8 1277 aa2.88□□□□□ -1.95
TOM1YDR457W PHO81P17442 1178 aa2.88□□□□□ -1.95
TOM1YDR457W PPS1P38148 807 aa2.88□□□□□ -1.95
TOM1YDR457W GIP1P38229 639 aa2.88□□□□□ -1.95
TOM1YDR457W ALD4P46367 519 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W VPS16Q03308 798 aa2.88□□□□□ -1.95
TOM1YDR457W DIB1Q06819 143 aaPredicted RBP2.88□□□□□ -1.95
TOM1YDR457W YCT1Q12235 531 aa2.88□□□□□ -1.95
TOM1YDR457W UBC1P21734 215 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W VPH1P32563 840 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W MCM7P38132 845 aa2.88□□□□□ -1.95
TOM1YDR457W RPS20P38701 121 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W SCS2P40075 244 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W LEM3P42838 414 aa2.88□□□□□ -1.95
TOM1YDR457W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
TOM1YDR457W SCL1P21243 252 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W STE11P23561 717 aa2.88□□□□□ -1.95
TOM1YDR457W PUP3P25451 205 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W RER1P25560 188 aa2.88□□□□□ -1.95
TOM1YDR457W RRN6P32786 894 aa2.88□□□□□ -1.95
TOM1YDR457W CCT8P47079 568 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W YGL082WP53155 381 aa2.88□□□□□ -1.95
TOM1YDR457W NEW1Q08972 1196 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W THP2O13539 261 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W MET6P05694 767 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W KRE2P27809 442 aa2.88□□□□□ -1.95
TOM1YDR457W KTR1P27810 393 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W IVY1Q04934 453 aa2.88□□□□□ -1.95
TOM1YDR457W YLR455WQ06188 304 aa2.88□□□□□ -1.95
TOM1YDR457W ARR1Q06596 294 aa2.88□□□□□ -1.95
TOM1YDR457W YOL087CQ99247 1116 aa2.88□□□□□ -1.95
TOM1YDR457W URA1P28272 314 aaPredicted RBP2.88□□□□□ -1.95
TOM1YDR457W SPC34P36131 295 aa2.88□□□□□ -1.95
TOM1YDR457W RPN10P38886 268 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W YMR018WQ04364 514 aa2.88□□□□□ -1.95
TOM1YDR457W GGA1Q06336 557 aa2.88□□□□□ -1.95
TOM1YDR457W SLX4Q12098 748 aa2.88□□□□□ -1.95
TOM1YDR457W YSW1P38280 609 aa2.88□□□□□ -1.95
TOM1YDR457W COX16P47081 118 aa2.88□□□□□ -1.95
TOM1YDR457W RTA1P53047 317 aa2.88□□□□□ -1.95
TOM1YDR457W RAD34Q06665 692 aa2.88□□□□□ -1.95
TOM1YDR457W ALR1Q08269 859 aa2.88□□□□□ -1.95
TOM1YDR457W MET7Q08645 548 aa2.88□□□□□ -1.95
TOM1YDR457W YOR389WQ08912 624 aa2.88□□□□□ -1.95
TOM1YDR457W WRS1Q12109 432 aaKnown RBP2.88□□□□□ -1.95
TOM1YDR457W TRM732Q03496 1420 aa2.88□□□□□ -1.95
TOM1YDR457W PSO2P30620 661 aa2.88□□□□□ -1.95
TOM1YDR457W RPC34P32910 317 aa2.88□□□□□ -1.95
TOM1YDR457W TRZ1P36159 838 aaPredicted RBP2.88□□□□□ -1.95
TOM1YDR457W UBP12P39538 1254 aa2.88□□□□□ -1.95
TOM1YDR457W GSM1P42950 618 aa2.88□□□□□ -1.95
TOM1YDR457W SLT2Q00772 484 aa2.88□□□□□ -1.95
TOM1YDR457W INA17Q02888 182 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms