RNA–Protein interactions for RNA: YDL136W

RPL35B, Transcript of Ribosomal 60S subunit protein L35B, yeast

Gene RPL35B, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL35B	YDL136W	AIM14	P53109	570 aa		5.01	□□□□□ -1.61
RPL35B	YDL136W	SIZ1	Q04195	904 aa		5.01	□□□□□ -1.61
RPL35B	YDL136W	CDA1	Q06702	301 aa		5.01	□□□□□ -1.61
RPL35B	YDL136W	REH1	Q06709	432 aa		5.01	□□□□□ -1.61
RPL35B	YDL136W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
RPL35B	YDL136W	CMP2	P14747	604 aa		5	□□□□□ -1.61
RPL35B	YDL136W	MIH1	P23748	554 aa		5	□□□□□ -1.61
RPL35B	YDL136W	HOG1	P32485	435 aa		5	□□□□□ -1.61
RPL35B	YDL136W	STE13	P33894	931 aa		5	□□□□□ -1.61
RPL35B	YDL136W	YEL1	P34225	687 aa		5	□□□□□ -1.61
RPL35B	YDL136W	TOS1	P38288	455 aa		5	□□□□□ -1.61
RPL35B	YDL136W	PCM1	P38628	557 aa	Known RBP	5	□□□□□ -1.61
RPL35B	YDL136W	ALY2	P47029	1046 aa		5	□□□□□ -1.61
RPL35B	YDL136W	NOG2	P53742	486 aa	Known RBP	5	□□□□□ -1.61
RPL35B	YDL136W	SNP1	Q00916	300 aa	Predicted RBP	5	□□□□□ -1.61
RPL35B	YDL136W	TMA17	Q12513	150 aa		5	□□□□□ -1.61
RPL35B	YDL136W	HMG1	P12683	1054 aa		4.99	□□□□□ -1.61
RPL35B	YDL136W	ZRG8	P40021	1076 aa		4.99	□□□□□ -1.61
RPL35B	YDL136W	YJR120W	P47157	116 aa		4.99	□□□□□ -1.61
RPL35B	YDL136W	YGR012W	P53206	393 aa		4.99	□□□□□ -1.61
RPL35B	YDL136W	FOL1	P53848	824 aa		4.99	□□□□□ -1.61
RPL35B	YDL136W	YKR011C	Q02209	353 aa		4.99	□□□□□ -1.61
RPL35B	YDL136W	MTQ2	Q03920	221 aa	Predicted RBP	4.99	□□□□□ -1.61
RPL35B	YDL136W	SSL1	Q04673	461 aa	Predicted RBP	4.99	□□□□□ -1.61
RPL35B	YDL136W	ATG33	Q06485	197 aa		4.99	□□□□□ -1.61
RPL35B	YDL136W	MED7	Q08278	222 aa		4.99	□□□□□ -1.61
RPL35B	YDL136W	FAP7	Q12055	197 aa	Predicted RBP	4.99	□□□□□ -1.61
RPL35B	YDL136W	RPS9A	O13516	197 aa	Known RBP	4.98	□□□□□ -1.61
RPL35B	YDL136W	CYC1	P00044	109 aa	Predicted RBP	4.98	□□□□□ -1.61
RPL35B	YDL136W	GAL10	P04397	699 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	ENA1	P13587	1091 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	CYS3	P31373	394 aa	Known RBP	4.98	□□□□□ -1.61
RPL35B	YDL136W	HSP78	P33416	811 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	ETP1	P38748	585 aa	Known RBP	4.98	□□□□□ -1.61
RPL35B	YDL136W	RLP7	P40693	322 aa	Known RBP	4.98	□□□□□ -1.61
RPL35B	YDL136W	GPP1	P41277	250 aa	Known RBP	4.98	□□□□□ -1.61
RPL35B	YDL136W	YJR008W	P47085	338 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RPL35B	YDL136W	YJR096W	P47137	282 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	FOL2	P51601	243 aa	Known RBP	4.98	□□□□□ -1.61
RPL35B	YDL136W	ORC3	P54790	616 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	ENA2	Q01896	1091 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	YDR338C	Q05497	695 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	GUD1	Q07729	489 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	ENA5	Q12691	1091 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	YBR182C-A	Q8TGU6	64 aa		4.98	□□□□□ -1.61
RPL35B	YDL136W	HSF1	P10961	833 aa		4.97	□□□□□ -1.61
RPL35B	YDL136W	TYE7	P33122	291 aa	Predicted RBP	4.97	□□□□□ -1.61
RPL35B	YDL136W	PAF1	P38351	445 aa		4.97	□□□□□ -1.61
RPL35B	YDL136W	GUP2	Q08929	609 aa		4.97	□□□□□ -1.61
RPL35B	YDL136W	YOR022C	Q12204	715 aa		4.97	□□□□□ -1.61
RPL35B	YDL136W	YDL177C	Q12257	170 aa		4.97	□□□□□ -1.61
RPL35B	YDL136W	GIN4	Q12263	1142 aa		4.97	□□□□□ -1.61
RPL35B	YDL136W	DIF1	O13577	133 aa		4.96	□□□□□ -1.62
RPL35B	YDL136W	PRP19	P32523	503 aa	Known RBP	4.96	□□□□□ -1.62
RPL35B	YDL136W	SAP190	P36123	1033 aa		4.96	□□□□□ -1.62
RPL35B	YDL136W	YIL108W	P40483	696 aa	Known RBP	4.96	□□□□□ -1.62
RPL35B	YDL136W	CTH1	P47976	325 aa		4.96	□□□□□ -1.62
RPL35B	YDL136W	UBC9	P50623	157 aa	Predicted RBP	4.96	□□□□□ -1.62
RPL35B	YDL136W	PLB2	Q03674	706 aa		4.96	□□□□□ -1.62
RPL35B	YDL136W	NHX1	Q04121	633 aa		4.96	□□□□□ -1.62
RPL35B	YDL136W	HAL9	Q12180	1030 aa		4.96	□□□□□ -1.62
RPL35B	YDL136W	PRC1	P00729	532 aa		4.95	□□□□□ -1.62
RPL35B	YDL136W	RPN10	P38886	268 aa	Known RBP	4.95	□□□□□ -1.62
RPL35B	YDL136W	SET5	P38890	526 aa	Known RBP	4.95	□□□□□ -1.62
RPL35B	YDL136W	MND2	P40577	368 aa		4.95	□□□□□ -1.62
RPL35B	YDL136W	SHR5	P41912	237 aa		4.95	□□□□□ -1.62
RPL35B	YDL136W	ATG36	P46983	293 aa		4.95	□□□□□ -1.62
RPL35B	YDL136W	VPS30	Q02948	557 aa		4.95	□□□□□ -1.62
RPL35B	YDL136W	COG8	Q04632	607 aa		4.95	□□□□□ -1.62
RPL35B	YDL136W	CRR1	Q05790	422 aa		4.95	□□□□□ -1.62
RPL35B	YDL136W	WHI4	Q07655	649 aa	Known RBP	4.95	□□□□□ -1.62
RPL35B	YDL136W	BRE4	Q07660	1125 aa		4.95	□□□□□ -1.62
RPL35B	YDL136W	SPE1	P08432	466 aa		4.94	□□□□□ -1.62
RPL35B	YDL136W	MRC1	P25588	1096 aa		4.94	□□□□□ -1.62
RPL35B	YDL136W	CCR4	P31384	837 aa	Known RBP	4.94	□□□□□ -1.62
RPL35B	YDL136W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	RIP-Chip
RPL35B	YDL136W	CKB2	P38930	258 aa		4.94	□□□□□ -1.62
RPL35B	YDL136W	PUS2	P53167	370 aa		4.94	□□□□□ -1.62
RPL35B	YDL136W	ENV11	P53246	860 aa		4.94	□□□□□ -1.62
RPL35B	YDL136W	ROT1	Q03691	256 aa		4.94	□□□□□ -1.62
RPL35B	YDL136W	HFD1	Q04458	532 aa		4.94	□□□□□ -1.62
RPL35B	YDL136W	Q0142	Q9ZZW4	58 aa		4.94	□□□□□ -1.62
RPL35B	YDL136W	FBP1	P09201	348 aa		4.93	□□□□□ -1.62
RPL35B	YDL136W	EUG1	P32474	517 aa		4.93	□□□□□ -1.62
RPL35B	YDL136W	YKR051W	P36142	418 aa		4.93	□□□□□ -1.62
RPL35B	YDL136W	HSL7	P38274	827 aa		4.93	□□□□□ -1.62
RPL35B	YDL136W	DOT6	P40059	670 aa	Known RBP	4.93	□□□□□ -1.62
RPL35B	YDL136W	GCV2	P49095	1034 aa		4.93	□□□□□ -1.62
RPL35B	YDL136W	GTF1	P53260	183 aa	Predicted RBP	4.93	□□□□□ -1.62
RPL35B	YDL136W	TPO1	Q07824	586 aa		4.93	□□□□□ -1.62
RPL35B	YDL136W	THI21	Q08975	551 aa		4.93	□□□□□ -1.62
RPL35B	YDL136W	LIP5	P32875	414 aa		4.92	□□□□□ -1.62
RPL35B	YDL136W	ENP1	P38333	483 aa	Known RBP	4.92	□□□□□ -1.62
RPL35B	YDL136W	PSP2	P50109	593 aa	Known RBP	4.92	□□□□□ -1.62
RPL35B	YDL136W	ZIP2	P53061	704 aa		4.92	□□□□□ -1.62
RPL35B	YDL136W	NPY1	P53164	384 aa		4.92	□□□□□ -1.62
RPL35B	YDL136W	DUS1	P53759	423 aa	Known RBP	4.92	□□□□□ -1.62
RPL35B	YDL136W	YLR149C	Q99296	730 aa		4.92	□□□□□ -1.62
RPL35B	YDL136W	POA1	P38218	177 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms