RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C EFM4P40516 257 aa2.28□□□□□ -2.04
BRE1YDL074C TOS3P43637 560 aa2.28□□□□□ -2.04
BRE1YDL074C SHE10P53075 577 aa2.28□□□□□ -2.04
BRE1YDL074C YGR021WP53212 290 aa2.28□□□□□ -2.04
BRE1YDL074C YGR117CP53270 476 aa2.28□□□□□ -2.04
BRE1YDL074C NSG2P53898 299 aa2.28□□□□□ -2.04
BRE1YDL074C PGA2P53903 129 aa2.28□□□□□ -2.04
BRE1YDL074C SYH1Q02875 849 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C SVF1Q05515 481 aa2.28□□□□□ -2.04
BRE1YDL074C ADY4Q05955 493 aa2.28□□□□□ -2.04
BRE1YDL074C ATG23Q06671 453 aa2.28□□□□□ -2.04
BRE1YDL074C UTP4Q06679 776 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C GAS5Q08193 484 aa2.28□□□□□ -2.04
BRE1YDL074C TCO89Q08921 799 aa2.28□□□□□ -2.04
BRE1YDL074C APL5Q08951 932 aaKnown RBP2.28□□□□□ -2.04
BRE1YDL074C YPL277CQ08989 487 aa2.28□□□□□ -2.04
BRE1YDL074C AIM7Q12156 149 aa2.28□□□□□ -2.04
BRE1YDL074C MCM16Q12262 181 aa2.28□□□□□ -2.04
BRE1YDL074C CDC19P00549 500 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C CBP1P07252 654 aa2.27□□□□□ -2.05
BRE1YDL074C YEL076C-AP0CX16 216 aa2.27□□□□□ -2.05
BRE1YDL074C YLR464WP0CX17 216 aa2.27□□□□□ -2.05
BRE1YDL074C SAM2P19358 384 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C DBP5P20449 482 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C SPB4P25808 606 aaPredicted RBP2.27□□□□□ -2.05
BRE1YDL074C NUD1P32336 851 aa2.27□□□□□ -2.05
BRE1YDL074C SMC1P32908 1225 aa2.27□□□□□ -2.05
BRE1YDL074C BLI1P35727 113 aa2.27□□□□□ -2.05
BRE1YDL074C MUD2P36084 527 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C RPC37P36121 282 aa2.27□□□□□ -2.05
BRE1YDL074C PCH2P38126 564 aa2.27□□□□□ -2.05
BRE1YDL074C RTT107P38850 1070 aa2.27□□□□□ -2.05
BRE1YDL074C YEL076CP39971 216 aa2.27□□□□□ -2.05
BRE1YDL074C RAD26P40352 1085 aa2.27□□□□□ -2.05
BRE1YDL074C MVP1P40959 511 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C HUL4P40985 892 aa2.27□□□□□ -2.05
BRE1YDL074C FIG4P42837 879 aa2.27□□□□□ -2.05
BRE1YDL074C MTC3P53077 123 aa2.27□□□□□ -2.05
BRE1YDL074C GUP1P53154 560 aa2.27□□□□□ -2.05
BRE1YDL074C MDR1P53258 950 aa2.27□□□□□ -2.05
BRE1YDL074C CWC22P53333 577 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C HST3P53687 447 aa2.27□□□□□ -2.05
BRE1YDL074C ESBP6P53918 673 aa2.27□□□□□ -2.05
BRE1YDL074C NCS2P53923 493 aaPredicted RBP2.27□□□□□ -2.05
BRE1YDL074C RPL22BP56628 122 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C KIN4Q01919 800 aa2.27□□□□□ -2.05
BRE1YDL074C VTC3Q02725 835 aa2.27□□□□□ -2.05
BRE1YDL074C UME1Q03010 460 aa2.27□□□□□ -2.05
BRE1YDL074C YMR018WQ04364 514 aa2.27□□□□□ -2.05
BRE1YDL074C AIM33Q04516 312 aa2.27□□□□□ -2.05
BRE1YDL074C POB3Q04636 552 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C DON1Q05610 365 aa2.27□□□□□ -2.05
BRE1YDL074C YLR297WQ05899 129 aa2.27□□□□□ -2.05
BRE1YDL074C NOP6Q07623 225 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C SMC5Q08204 1093 aa2.27□□□□□ -2.05
BRE1YDL074C ZRT2Q12436 422 aa2.27□□□□□ -2.05
BRE1YDL074C PPR1P07272 904 aaPredicted RBP2.27□□□□□ -2.05
BRE1YDL074C RAD18P10862 487 aa2.27□□□□□ -2.05
BRE1YDL074C GFA1P14742 717 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C SPO12P17123 173 aa2.27□□□□□ -2.05
BRE1YDL074C HPR1P17629 752 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C RAD57P25301 460 aa2.27□□□□□ -2.05
BRE1YDL074C PDC6P26263 563 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C DEP1P31385 405 aa2.27□□□□□ -2.05
BRE1YDL074C SUV3P32580 737 aa2.27□□□□□ -2.05
BRE1YDL074C RTG2P32608 588 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C UGA4P32837 571 aa2.27□□□□□ -2.05
BRE1YDL074C XRS2P33301 854 aa2.27□□□□□ -2.05
BRE1YDL074C PCS60P38137 543 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
BRE1YDL074C SPP381P38282 291 aaPredicted RBP2.27□□□□□ -2.05
BRE1YDL074C CCC2P38995 1004 aa2.27□□□□□ -2.05
BRE1YDL074C GPB2P39717 880 aa2.27□□□□□ -2.05
BRE1YDL074C UTP7P40055 554 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C SEC9P40357 651 aa2.27□□□□□ -2.05
BRE1YDL074C FIS1P40515 155 aa2.27□□□□□ -2.05
BRE1YDL074C IES1P43579 692 aa2.27□□□□□ -2.05
BRE1YDL074C RPC17P47076 161 aa2.27□□□□□ -2.05
BRE1YDL074C YJR115WP47152 169 aa2.27□□□□□ -2.05
BRE1YDL074C HFM1P51979 1187 aa2.27□□□□□ -2.05
BRE1YDL074C KAP114P53067 1004 aa2.27□□□□□ -2.05
BRE1YDL074C RRT6P53117 311 aaPredicted RBP2.27□□□□□ -2.05
BRE1YDL074C LSC2P53312 427 aa2.27□□□□□ -2.05
BRE1YDL074C BOP3P53958 396 aa2.27□□□□□ -2.05
BRE1YDL074C ALD6P54115 500 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C ORC4P54791 529 aa2.27□□□□□ -2.05
BRE1YDL074C MRS2Q01926 470 aa2.27□□□□□ -2.05
BRE1YDL074C MSH6Q03834 1242 aa2.27□□□□□ -2.05
BRE1YDL074C RRB1Q04225 511 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C VTI1Q04338 217 aa2.27□□□□□ -2.05
BRE1YDL074C STE23Q06010 1027 aa2.27□□□□□ -2.05
BRE1YDL074C YLR326WQ06170 240 aaKnown RBP2.27□□□□□ -2.05
BRE1YDL074C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
BRE1YDL074C MLH2Q07980 695 aa2.27□□□□□ -2.05
BRE1YDL074C OXR1Q08952 273 aa2.27□□□□□ -2.05
BRE1YDL074C OSW2Q12202 724 aa2.27□□□□□ -2.05
BRE1YDL074C TUB2P02557 457 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C TOM70P07213 617 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C RPP1BP10622 106 aaKnown RBP2.26□□□□□ -2.05
BRE1YDL074C CHS2P14180 963 aa2.26□□□□□ -2.05
BRE1YDL074C CLB1P24868 471 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms