RNA–Protein interactions for RNA: YCL055W

KAR4, Transcript of Transcription factor required for response to pheromones, yeast

Gene KAR4, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAR4	YCL055W	HFM1	P51979	1187 aa		4.66	□□□□□ -1.66
KAR4	YCL055W	ALG12	P53730	551 aa		4.66	□□□□□ -1.66
KAR4	YCL055W	AIM39	Q08223	395 aa		4.66	□□□□□ -1.66
KAR4	YCL055W	PHO8	P11491	566 aa		4.65	□□□□□ -1.67
KAR4	YCL055W	MSD1	P15179	658 aa	Known RBP	4.65	□□□□□ -1.67
KAR4	YCL055W	NPP1	P25353	742 aa		4.65	□□□□□ -1.67
KAR4	YCL055W	HRR25	P29295	494 aa	Known RBP	4.65	□□□□□ -1.67
KAR4	YCL055W	PET10	P36139	283 aa		4.65	□□□□□ -1.67
KAR4	YCL055W	GIC1	P38785	314 aa		4.65	□□□□□ -1.67
KAR4	YCL055W	LCD1	Q04377	747 aa		4.65	□□□□□ -1.67
KAR4	YCL055W	YLR125W	Q12138	136 aa		4.65	□□□□□ -1.67
KAR4	YCL055W	TOM70	P07213	617 aa	Known RBP	4.64	□□□□□ -1.67
KAR4	YCL055W	PFK1	P16861	987 aa	Known RBP	4.64	□□□□□ -1.67
KAR4	YCL055W	RRP14	P36080	434 aa	Known RBP	4.64	□□□□□ -1.67
KAR4	YCL055W	NPP2	P39997	493 aa		4.64	□□□□□ -1.67
KAR4	YCL055W	MND2	P40577	368 aa		4.64	□□□□□ -1.67
KAR4	YCL055W	UBP6	P43593	499 aa	Known RBP	4.64	□□□□□ -1.67
KAR4	YCL055W	SRT1	Q03175	343 aa		4.64	□□□□□ -1.67
KAR4	YCL055W	BUL2	Q03758	920 aa	Known RBP	4.64	□□□□□ -1.67
KAR4	YCL055W	TPO1	Q07824	586 aa		4.64	□□□□□ -1.67
KAR4	YCL055W	MET6	P05694	767 aa	Known RBP	4.63	□□□□□ -1.67
KAR4	YCL055W	FUN30	P31380	1131 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	THI4	P32318	326 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	SCT1	P32784	759 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	TSL1	P38427	1098 aa	Known RBP	4.63	□□□□□ -1.67
KAR4	YCL055W	TOK1	P40310	691 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	MET12	P46151	657 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	GYP7	P48365	746 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	SFB2	P53953	876 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	XYL2	Q07993	356 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	OSW2	Q12202	724 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	HIR3	P47171	1648 aa		4.63	□□□□□ -1.67
KAR4	YCL055W	SPA2	P23201	1466 aa	Known RBP	4.62	□□□□□ -1.67
KAR4	YCL055W	POA1	P38218	177 aa		4.62	□□□□□ -1.67
KAR4	YCL055W	YER158C	P40095	573 aa		4.62	□□□□□ -1.67
KAR4	YCL055W	EXG2	P52911	562 aa		4.62	□□□□□ -1.67
KAR4	YCL055W	HIS5	P07172	385 aa		4.61	□□□□□ -1.67
KAR4	YCL055W	CDC48	P25694	835 aa	Known RBP	4.61	□□□□□ -1.67
KAR4	YCL055W	REC104	P33323	182 aa		4.61	□□□□□ -1.67
KAR4	YCL055W	YKR078W	P36158	585 aa	Known RBP	4.61	□□□□□ -1.67
KAR4	YCL055W	YAP1801	P38856	637 aa		4.61	□□□□□ -1.67
KAR4	YCL055W	CCM1	P48237	864 aa	Predicted RBP	4.61	□□□□□ -1.67
KAR4	YCL055W	HSV2	P50079	448 aa	Predicted RBP	4.61	□□□□□ -1.67
KAR4	YCL055W	YPR196W	Q06595	470 aa		4.61	□□□□□ -1.67
KAR4	YCL055W	ADY3	Q07732	790 aa		4.61	□□□□□ -1.67
KAR4	YCL055W	RPP2A	P05319	106 aa	Known RBP	4.6	□□□□□ -1.67
KAR4	YCL055W	GDH3	P39708	457 aa		4.6	□□□□□ -1.67
KAR4	YCL055W	ATF1	P40353	525 aa		4.6	□□□□□ -1.67
KAR4	YCL055W	ECM21	P38167	1117 aa	Known RBP	4.59	□□□□□ -1.67
KAR4	YCL055W	BRN1	P38170	754 aa		4.59	□□□□□ -1.67
KAR4	YCL055W	SNM1	P40993	198 aa		4.59	□□□□□ -1.67
KAR4	YCL055W	ALG2	P43636	503 aa		4.59	□□□□□ -1.67
KAR4	YCL055W	MAL11	P53048	616 aa		4.59	□□□□□ -1.67
KAR4	YCL055W	POB3	Q04636	552 aa	Known RBP	4.59	□□□□□ -1.67
KAR4	YCL055W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
KAR4	YCL055W	MSH2	P25847	964 aa		4.58	□□□□□ -1.68
KAR4	YCL055W	YBR238C	P38330	731 aa	Known RBP	4.58	□□□□□ -1.68
KAR4	YCL055W	ZRG8	P40021	1076 aa		4.58	□□□□□ -1.68
KAR4	YCL055W	CHA4	P43634	648 aa		4.58	□□□□□ -1.68
KAR4	YCL055W	YKE2	P52553	114 aa		4.58	□□□□□ -1.68
KAR4	YCL055W	ENA1	P13587	1091 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	RPC82	P32349	654 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	SRP101	P32916	621 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	SPC42	P36094	363 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	MNN1	P39106	762 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	ENA2	Q01896	1091 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	ENV7	Q12003	364 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	KCS1	Q12494	1050 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	ENA5	Q12691	1091 aa		4.57	□□□□□ -1.68
KAR4	YCL055W	GYP8	P43570	497 aa		4.56	□□□□□ -1.68
KAR4	YCL055W	YGR283C	P53336	341 aa	Predicted RBP	4.56	□□□□□ -1.68
KAR4	YCL055W	DOS2	P54858	310 aa		4.56	□□□□□ -1.68
KAR4	YCL055W	NTG2	Q08214	380 aa		4.56	□□□□□ -1.68
KAR4	YCL055W	NOT3	P06102	836 aa	Known RBP	4.55	□□□□□ -1.68
KAR4	YCL055W	RFA1	P22336	621 aa	Known RBP	4.55	□□□□□ -1.68
KAR4	YCL055W	EMC3	P36039	253 aa		4.55	□□□□□ -1.68
KAR4	YCL055W	STU2	P46675	888 aa		4.55	□□□□□ -1.68
KAR4	YCL055W	NIT3	P49954	291 aa		4.55	□□□□□ -1.68
KAR4	YCL055W	YGR012W	P53206	393 aa		4.55	□□□□□ -1.68
KAR4	YCL055W	CDA1	Q06702	301 aa		4.55	□□□□□ -1.68
KAR4	YCL055W	THO2	P53552	1597 aa	Known RBP	4.54	□□□□□ -1.68
KAR4	YCL055W	MPH2	P0CD99	609 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	HSF1	P10961	833 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	MEF1	P25039	761 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	SPC29	P33419	253 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	PEX6	P33760	1030 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	FPR3	P38911	411 aa	Known RBP	4.54	□□□□□ -1.68
KAR4	YCL055W	DSS1	P39112	969 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	QRI1	P43123	477 aa	Known RBP	4.54	□□□□□ -1.68
KAR4	YCL055W	DAM1	P53267	343 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	LGE1	Q02796	332 aa	Known RBP	4.54	□□□□□ -1.68
KAR4	YCL055W	UGO1	Q03327	502 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	ENB1	Q08299	606 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	MDM12	Q92328	271 aa		4.54	□□□□□ -1.68
KAR4	YCL055W	EFT1	P32324	842 aa	Known RBP	4.53	□□□□□ -1.68
KAR4	YCL055W	RAI1	P53063	387 aa	Known RBP	4.53	□□□□□ -1.68
KAR4	YCL055W	YLR040C	Q07988	224 aa		4.53	□□□□□ -1.68
KAR4	YCL055W	YOL073C	Q08232	322 aa		4.53	□□□□□ -1.68
KAR4	YCL055W	MET7	Q08645	548 aa		4.53	□□□□□ -1.68
KAR4	YCL055W	XRN1	P22147	1528 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms