RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	RPL11A	P0C0W9	174 aa	Known RBP	3.26	□□□□□ -1.89
SPB1	YCL054W	TOS1	P38288	455 aa		3.26	□□□□□ -1.89
SPB1	YCL054W	YAP3	P38749	330 aa		3.26	□□□□□ -1.89
SPB1	YCL054W	YNR063W	P53749	607 aa		3.26	□□□□□ -1.89
SPB1	YCL054W	RPL11B	Q3E757	174 aa	Predicted RBP	3.26	□□□□□ -1.89
SPB1	YCL054W	TMA7	Q3E764	64 aa	Known RBP	3.26	□□□□□ -1.89
SPB1	YCL054W	MPD2	Q99316	277 aa		3.26	□□□□□ -1.89
SPB1	YCL054W	SRB8	P25648	1427 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	POL5	P39985	1022 aa	Known RBP	3.25	□□□□□ -1.89
SPB1	YCL054W	MXR1	P40029	184 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	ALG2	P43636	503 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	FAP7	Q12055	197 aa	Predicted RBP	3.25	□□□□□ -1.89
SPB1	YCL054W	PTC5	Q12511	572 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	CHS2	P14180	963 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	CDC12	P32468	407 aa	Known RBP	3.25	□□□□□ -1.89
SPB1	YCL054W	DOM34	P33309	386 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	RRP8	P38961	392 aa	Known RBP	3.25	□□□□□ -1.89
SPB1	YCL054W	TOK1	P40310	691 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	LEM3	P42838	414 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	GCV1	P48015	400 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	YGR021W	P53212	290 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	GIN4	Q12263	1142 aa		3.25	□□□□□ -1.89
SPB1	YCL054W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	not detected
SPB1	YCL054W	SFL1	P20134	766 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	RPA135	P22138	1203 aa	Known RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	MIH1	P23748	554 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	PCM1	P38628	557 aa	Known RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	not detected
SPB1	YCL054W	NEO1	P40527	1151 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	YFL054C	P43549	646 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	YJR096W	P47137	282 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	PEX14	P53112	341 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	YGR283C	P53336	341 aa	Predicted RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	SPP382	Q06411	708 aa	Predicted RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	GAS5	Q08193	484 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	ALG6	Q12001	544 aa	Known RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	SST2	P11972	698 aa	Known RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	TFC4	P33339	1025 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	MCD4	P36051	919 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	SAH1	P39954	449 aa	Known RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	NPP2	P39997	493 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	PEA2	P40091	420 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	CAF16	P43569	289 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	KIP3	P53086	805 aa	Known RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	HRQ1	Q05549	1077 aa		3.24	□□□□□ -1.89
SPB1	YCL054W	DUS3	Q06053	668 aa	Known RBP	3.24	□□□□□ -1.89
SPB1	YCL054W	RAD18	P10862	487 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	ERS1	P17261	260 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	AAR2	P32357	355 aa	Predicted RBP	3.23	□□□□□ -1.89
SPB1	YCL054W	DAL3	P32459	195 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	SLA2	P33338	968 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	PGM1	P33401	570 aa	Known RBP	3.23	□□□□□ -1.89
SPB1	YCL054W	REI1	P38344	393 aa	Predicted RBP	3.23	□□□□□ -1.89
SPB1	YCL054W	SAF1	P38352	637 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	DAS1	P47005	663 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	YGR045C	P53229	120 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	SOK2	P53438	785 aa	Predicted RBP	3.23	□□□□□ -1.89
SPB1	YCL054W	DSE4	P53753	1117 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	MDG1	P53885	366 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	ATG16	Q03818	150 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	LCD1	Q04377	747 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	NSI1	Q12457	570 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	GAL1	P04385	528 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	HSP78	P33416	811 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	YEL1	P34225	687 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	QNS1	P38795	714 aa	Known RBP	3.23	□□□□□ -1.89
SPB1	YCL054W	YAR028W	P39548	234 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	GPP2	P40106	250 aa	Known RBP	3.23	□□□□□ -1.89
SPB1	YCL054W	MTC3	P53077	123 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	CEF1	Q03654	590 aa	Predicted RBP	3.23	□□□□□ -1.89
SPB1	YCL054W	YDR338C	Q05497	695 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	RSC3	Q06639	885 aa		3.23	□□□□□ -1.89
SPB1	YCL054W	KIP1	P28742	1111 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	OAF1	P39720	1047 aa	Predicted RBP	3.22	□□□□□ -1.89
SPB1	YCL054W	NIT2	P47016	307 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	PIP2	P52960	996 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	ATP25	Q03153	612 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	HFD1	Q04458	532 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	YLR122C	Q12312	125 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	NKP1	Q12493	238 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	RET1	P22276	1149 aa	Known RBP	3.22	□□□□□ -1.89
SPB1	YCL054W	GSY1	P23337	708 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
SPB1	YCL054W	TSL1	P38427	1098 aa	Known RBP	3.22	□□□□□ -1.89
SPB1	YCL054W	AKR1	P39010	764 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	GIP2	P40036	548 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	HXT16	P47185	567 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	AIM14	P53109	570 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	MET14	Q02196	202 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	MAK10	Q02197	733 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	RSA3	Q05942	220 aa	Known RBP	3.22	□□□□□ -1.89
SPB1	YCL054W	ATG33	Q06485	197 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	ENV7	Q12003	364 aa		3.22	□□□□□ -1.89
SPB1	YCL054W	APA1	P16550	321 aa	Known RBP	3.21	□□□□□ -1.9
SPB1	YCL054W	CKB2	P38930	258 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	GPB2	P39717	880 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	DUG1	P43616	481 aa	Known RBP	3.21	□□□□□ -1.9
SPB1	YCL054W	YKE2	P52553	114 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	TRE2	Q08693	809 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	YPL260W	Q08977	551 aa		3.21	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms