RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	SMC6	Q12749	1114 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	CDC6	P09119	513 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	DBP5	P20449	482 aa	Known RBP	5.07	□□□□□ -1.6
SAF1	YBR280C	PEX34	P25584	144 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	VPH1	P32563	840 aa	Known RBP	5.07	□□□□□ -1.6
SAF1	YBR280C	COT1	P32798	439 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	CUL3	P53202	744 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	UBP10	P53874	792 aa	Predicted RBP	5.07	□□□□□ -1.6
SAF1	YBR280C	SFB2	P53953	876 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	EEB1	Q02891	456 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	NSE5	Q03718	556 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	NSE1	Q07913	336 aa		5.07	□□□□□ -1.6
SAF1	YBR280C	TUF1	P02992	437 aa	Known RBP	5.06	□□□□□ -1.6
SAF1	YBR280C	RPS14A	P06367	137 aa	Known RBP	5.06	□□□□□ -1.6
SAF1	YBR280C	RPS14B	P39516	138 aa	Known RBP	5.06	□□□□□ -1.6
SAF1	YBR280C	ZAP1	P47043	880 aa		5.06	□□□□□ -1.6
SAF1	YBR280C	FAA4	P47912	694 aa	Known RBP	5.06	□□□□□ -1.6
SAF1	YBR280C	STB4	P50104	949 aa		5.06	□□□□□ -1.6
SAF1	YBR280C	ECM7	Q06200	448 aa		5.06	□□□□□ -1.6
SAF1	YBR280C	FMP25	Q08023	583 aa		5.06	□□□□□ -1.6
SAF1	YBR280C	OSH2	Q12451	1283 aa		5.06	□□□□□ -1.6
SAF1	YBR280C	HXK1	P04806	485 aa	Known RBP	5.05	□□□□□ -1.6
SAF1	YBR280C	KGD2	P19262	463 aa	Predicted RBP	5.05	□□□□□ -1.6
SAF1	YBR280C	PIH1	P38768	344 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	LSB6	P42951	607 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	TAM41	P53230	385 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	YGR130C	P53278	816 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	SDA1	P53313	767 aa	Known RBP	5.05	□□□□□ -1.6
SAF1	YBR280C	CAF120	P53836	1060 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	CWC21	Q03375	135 aa	Known RBP	5.05	□□□□□ -1.6
SAF1	YBR280C	YHM2	Q04013	314 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	FUS2	Q05670	677 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	TIP41	Q12199	356 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	PUS1	Q12211	544 aa	Known RBP	5.05	□□□□□ -1.6
SAF1	YBR280C	STB3	Q12427	513 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	MEX67	Q99257	599 aa	Known RBP	5.05	□□□□□ -1.6
SAF1	YBR280C	HO	P09932	586 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	FUS1	P11710	512 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	ROG3	P43602	733 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	ENV11	P53246	860 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	SPC98	P53540	846 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	ARK1	P53974	638 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	TRS130	Q03660	1102 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	YML053C	Q04978	212 aa		5.05	□□□□□ -1.6
SAF1	YBR280C	FRS2	P15625	503 aa	Known RBP	5.04	□□□□□ -1.6
SAF1	YBR280C	CBP3	P21560	335 aa		5.04	□□□□□ -1.6
SAF1	YBR280C	SPO11	P23179	398 aa		5.04	□□□□□ -1.6
SAF1	YBR280C	RPC53	P25441	422 aa		5.04	□□□□□ -1.6
SAF1	YBR280C	PRR1	P28708	518 aa		5.04	□□□□□ -1.6
SAF1	YBR280C	VPS35	P34110	944 aa		5.04	□□□□□ -1.6
SAF1	YBR280C	SIP3	P38717	1229 aa		5.04	□□□□□ -1.6
SAF1	YBR280C	SIP5	P40210	489 aa	Known RBP	5.04	□□□□□ -1.6
SAF1	YBR280C	ATH1	P48016	1211 aa		5.04	□□□□□ -1.6
SAF1	YBR280C	CAF130	P53280	1122 aa	Predicted RBP	5.04	□□□□□ -1.6
SAF1	YBR280C	SHS1	Q07657	551 aa		5.04	□□□□□ -1.6
SAF1	YBR280C	RPL4A	P10664	362 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	HOM2	P13663	365 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	CYS3	P31373	394 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	ASF1	P32447	279 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	ECM32	P32644	1121 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	BUD6	P41697	788 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	RPL4B	P49626	362 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	CBK1	P53894	756 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	SLG1	P54867	378 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	STP1	Q00947	519 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	ADA2	Q02336	434 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	ADY4	Q05955	493 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	YLR407W	Q06070	228 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	YOR296W	Q08748	1289 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	NBL1	Q3E7Y6	73 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	MSB2	P32334	1306 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	BEM2	P39960	2167 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	RPS9A	O13516	197 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	HSP82	P02829	709 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	TRL1	P09880	827 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	TAF13	P11747	167 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SAF1	YBR280C	MRF1	P30775	413 aa	Predicted RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	PGM2	P37012	569 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	YBR284W	P38150	797 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	MMS4	P38257	691 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	FMO1	P38866	432 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	ULI1	P43604	169 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	BFA1	P47113	574 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	ENT3	P47160	408 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	YGR153W	P48238	217 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	YNR061C	P53747	219 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	VTC3	Q02725	835 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	GET3	Q12154	354 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	PDH1	Q12428	516 aa	Known RBP	5.03	□□□□□ -1.6
SAF1	YBR280C	APM4	Q99186	491 aa		5.03	□□□□□ -1.6
SAF1	YBR280C	YEL076C-A	P0CX16	216 aa		5.02	□□□□□ -1.61
SAF1	YBR280C	YLR464W	P0CX17	216 aa		5.02	□□□□□ -1.61
SAF1	YBR280C	RAM2	P29703	316 aa		5.02	□□□□□ -1.61
SAF1	YBR280C	NAM7	P30771	971 aa	Known RBP	5.02	□□□□□ -1.61
SAF1	YBR280C	POL12	P38121	705 aa	Predicted RBP	5.02	□□□□□ -1.61
SAF1	YBR280C	MED6	P38782	295 aa		5.02	□□□□□ -1.61
SAF1	YBR280C	UBP5	P39944	805 aa		5.02	□□□□□ -1.61
SAF1	YBR280C	YEL076C	P39971	216 aa		5.02	□□□□□ -1.61
SAF1	YBR280C	ORC5	P50874	479 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms