RNA–Protein interactions for RNA: YAL022C

FUN26, Transcript of High affinity, broad selectivity, nucleoside/nucleobase transporter, yeast

Gene FUN26, Length 1,554 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FUN26	YAL022C	SDS3	P40505	327 aa		13.76	□□□□□ -0.21
FUN26	YAL022C	APT1	P49435	187 aa	Known RBP	13.76	□□□□□ -0.21
FUN26	YAL022C	SRF1	Q12516	437 aa		13.76	□□□□□ -0.21
FUN26	YAL022C	PET123	P17558	318 aa		13.75	□□□□□ -0.21
FUN26	YAL022C	UBC1	P21734	215 aa	Known RBP	13.75	□□□□□ -0.21
FUN26	YAL022C	STO1	P34160	861 aa	Known RBP	13.75	□□□□□ -0.21
FUN26	YAL022C	YNL146W	P53906	100 aa		13.75	□□□□□ -0.21
FUN26	YAL022C	OPY2	Q06810	360 aa		13.75	□□□□□ -0.21
FUN26	YAL022C	MAS2	P11914	482 aa		13.75	□□□□□ -0.21
FUN26	YAL022C	SEC9	P40357	651 aa		13.75	□□□□□ -0.21
FUN26	YAL022C	TAD1	P53065	400 aa		13.75	□□□□□ -0.21
FUN26	YAL022C	CSR1	Q06705	408 aa	Known RBP	13.75	□□□□□ -0.21
FUN26	YAL022C	ICL2	Q12031	575 aa		13.75	□□□□□ -0.21
FUN26	YAL022C	TOM1	Q03280	3268 aa		13.74	□□□□□ -0.21
FUN26	YAL022C	VMA1	P17255	1071 aa	Known RBP	13.73	□□□□□ -0.21
FUN26	YAL022C	SMY2	P32909	740 aa	Known RBP	13.73	□□□□□ -0.21
FUN26	YAL022C	MCX1	P38323	520 aa	Predicted RBP	13.73	□□□□□ -0.21
FUN26	YAL022C	GUA1	P38625	525 aa	Known RBP	13.73	□□□□□ -0.21
FUN26	YAL022C	KSP1	P38691	1029 aa	Known RBP	13.73	□□□□□ -0.21
FUN26	YAL022C	ACF4	P47129	309 aa		13.73	□□□□□ -0.21
FUN26	YAL022C	SHE10	P53075	577 aa		13.73	□□□□□ -0.21
FUN26	YAL022C	HIF1	Q12373	385 aa		13.73	□□□□□ -0.21
FUN26	YAL022C	TOM70	P07213	617 aa	Known RBP	13.72	□□□□□ -0.21
FUN26	YAL022C	DPH2	P32461	534 aa		13.72	□□□□□ -0.21
FUN26	YAL022C	GPT2	P36148	743 aa		13.72	□□□□□ -0.21
FUN26	YAL022C	NPP2	P39997	493 aa		13.72	□□□□□ -0.21
FUN26	YAL022C	EFM4	P40516	257 aa		13.72	□□□□□ -0.21
FUN26	YAL022C	CUL3	P53202	744 aa		13.72	□□□□□ -0.21
FUN26	YAL022C	HOS3	Q02959	697 aa	Known RBP	13.72	□□□□□ -0.21
FUN26	YAL022C	UTP14	Q04500	899 aa	Known RBP	13.72	□□□□□ -0.21
FUN26	YAL022C	JNM1	P36224	373 aa		13.71	□□□□□ -0.21
FUN26	YAL022C	MMM1	P41800	426 aa		13.71	□□□□□ -0.21
FUN26	YAL022C	HSH155	P49955	971 aa	Known RBP	13.71	□□□□□ -0.21
FUN26	YAL022C	DUS1	P53759	423 aa	Known RBP	13.71	□□□□□ -0.21
FUN26	YAL022C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.71	□□□□□ -0.21	RIP-Chip
FUN26	YAL022C	YDR090C	Q03193	310 aa		13.71	□□□□□ -0.21
FUN26	YAL022C	YML020W	Q03722	664 aa		13.71	□□□□□ -0.21
FUN26	YAL022C	HFI1	Q12060	488 aa		13.71	□□□□□ -0.21
FUN26	YAL022C	DBP1	P24784	617 aa	Known RBP	13.71	□□□□□ -0.22
FUN26	YAL022C	RAD57	P25301	460 aa		13.71	□□□□□ -0.22
FUN26	YAL022C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	13.71	□□□□□ -0.22	not detected
FUN26	YAL022C	ORC5	P50874	479 aa		13.71	□□□□□ -0.22
FUN26	YAL022C	ENV11	P53246	860 aa		13.71	□□□□□ -0.22
FUN26	YAL022C	ESBP6	P53918	673 aa		13.71	□□□□□ -0.22
FUN26	YAL022C	SLX4	Q12098	748 aa		13.71	□□□□□ -0.22
FUN26	YAL022C	JJJ3	P47138	172 aa		13.7	□□□□□ -0.22
FUN26	YAL022C	MSC2	Q03455	724 aa		13.7	□□□□□ -0.22
FUN26	YAL022C	ECM7	Q06200	448 aa		13.7	□□□□□ -0.22
FUN26	YAL022C	TSR1	Q07381	788 aa	Known RBP	13.7	□□□□□ -0.22
FUN26	YAL022C	YDL206W	Q12424	762 aa		13.7	□□□□□ -0.22
FUN26	YAL022C	KIP1	P28742	1111 aa		13.69	□□□□□ -0.22
FUN26	YAL022C	RAD54	P32863	898 aa		13.69	□□□□□ -0.22
FUN26	YAL022C	HXT8	P40886	569 aa		13.69	□□□□□ -0.22
FUN26	YAL022C	SKP2	P42843	763 aa		13.69	□□□□□ -0.22
FUN26	YAL022C	ASN1	P49089	572 aa	Known RBP	13.69	□□□□□ -0.22
FUN26	YAL022C	VPS60	Q03390	229 aa		13.69	□□□□□ -0.22
FUN26	YAL022C	SML1	Q04964	104 aa		13.69	□□□□□ -0.22
FUN26	YAL022C	VAC14	Q06708	880 aa		13.69	□□□□□ -0.22
FUN26	YAL022C	PET111	P08468	800 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	SNA3	P14359	133 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	TMT1	P32643	299 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	BCS1	P32839	456 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	PSF2	P40359	213 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	CEP3	P40969	608 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	BRE5	P53741	515 aa	Known RBP	13.68	□□□□□ -0.22
FUN26	YAL022C	BOP3	P53958	396 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	DAS2	Q12084	232 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	MCM16	Q12262	181 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	ATG11	Q12527	1178 aa		13.68	□□□□□ -0.22
FUN26	YAL022C	HXT1	P32465	570 aa		13.67	□□□□□ -0.22
FUN26	YAL022C	SRB4	P32569	687 aa		13.67	□□□□□ -0.22
FUN26	YAL022C	VID24	P38263	362 aa		13.67	□□□□□ -0.22
FUN26	YAL022C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	13.67	□□□□□ -0.22	not detected
FUN26	YAL022C	YJR107W	P47145	328 aa		13.67	□□□□□ -0.22
FUN26	YAL022C	NCS6	P53088	359 aa		13.67	□□□□□ -0.22
FUN26	YAL022C	DAK1	P54838	584 aa	Known RBP	13.67	□□□□□ -0.22
FUN26	YAL022C	YML082W	Q04533	649 aa	Known RBP	13.67	□□□□□ -0.22
FUN26	YAL022C	TRP2	P00899	507 aa	Known RBP	13.66	□□□□□ -0.22
FUN26	YAL022C	AFT1	P22149	690 aa		13.66	□□□□□ -0.22
FUN26	YAL022C	YMR124W	P39523	943 aa	Known RBP	13.66	□□□□□ -0.22
FUN26	YAL022C	NDC80	P40460	691 aa		13.66	□□□□□ -0.22
FUN26	YAL022C	TPO2	P53283	614 aa		13.66	□□□□□ -0.22
FUN26	YAL022C	TRS130	Q03660	1102 aa		13.66	□□□□□ -0.22
FUN26	YAL022C	SOV1	Q04748	898 aa		13.66	□□□□□ -0.22
FUN26	YAL022C	PRY3	P47033	881 aa		13.66	□□□□□ -0.22
FUN26	YAL022C	MNP1	P53163	194 aa	Predicted RBP	13.66	□□□□□ -0.22
FUN26	YAL022C	RPA49	Q01080	415 aa	Predicted RBP	13.66	□□□□□ -0.22
FUN26	YAL022C	YLR001C	Q07895	862 aa		13.66	□□□□□ -0.22
FUN26	YAL022C	SWI3	P32591	825 aa		13.65	□□□□□ -0.22
FUN26	YAL022C	KIC1	P38692	1080 aa		13.65	□□□□□ -0.22
FUN26	YAL022C	TCD1	P38756	429 aa		13.65	□□□□□ -0.22
FUN26	YAL022C	SET5	P38890	526 aa	Known RBP	13.65	□□□□□ -0.22
FUN26	YAL022C	FTR1	P40088	404 aa		13.65	□□□□□ -0.22
FUN26	YAL022C	SAD1	P43589	448 aa		13.65	□□□□□ -0.22
FUN26	YAL022C	TBF1	Q02457	562 aa		13.65	□□□□□ -0.22
FUN26	YAL022C	RGA2	Q06407	1009 aa		13.65	□□□□□ -0.22
FUN26	YAL022C	SUT2	Q12286	268 aa		13.65	□□□□□ -0.22
FUN26	YAL022C	WHI2	P12611	486 aa		13.64	□□□□□ -0.23
FUN26	YAL022C	NAT1	P12945	854 aa	Known RBP	13.64	□□□□□ -0.23
FUN26	YAL022C	CKI1	P20485	582 aa		13.64	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms