RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 CPNE3O75131 537 aaKnown RBP9.95□□□□□ -0.82
SCARB2-224ENST00000640880 MICAL2O94851 1124 aa9.95□□□□□ -0.82
SCARB2-224ENST00000640880 ATP2B1P20020 1258 aa9.95□□□□□ -0.82
SCARB2-224ENST00000640880 DHX38Q92620 1227 aaKnown RBP9.95□□□□□ -0.82
SCARB2-224ENST00000640880 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
SCARB2-224ENST00000640880 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
SCARB2-224ENST00000640880 DNAJA1P31689 397 aaKnown RBP9.94□□□□□ -0.82
SCARB2-224ENST00000640880 PLA2G4AP47712 749 aa9.94□□□□□ -0.82
SCARB2-224ENST00000640880 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.94□□□□□ -0.82
SCARB2-224ENST00000640880 ZNF394Q53GI3 561 aa9.94□□□□□ -0.82
SCARB2-224ENST00000640880 RHPN1Q8TCX5 695 aa9.94□□□□□ -0.82
SCARB2-224ENST00000640880 PCDHGB7Q9Y5F8 929 aa9.94□□□□□ -0.82
SCARB2-224ENST00000640880 LAMC3Q9Y6N6 1575 aa9.93□□□□□ -0.82
SCARB2-224ENST00000640880 GTF2F1P35269 517 aaKnown RBP eCLIP9.93□□□□□ -0.82
SCARB2-224ENST00000640880 SLC19A1P41440 591 aa9.93□□□□□ -0.82
SCARB2-224ENST00000640880 GNASQ5JWF2 1037 aa9.93□□□□□ -0.82
SCARB2-224ENST00000640880 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
SCARB2-224ENST00000640880 DDX41Q9UJV9 622 aaKnown RBP9.93□□□□□ -0.82
SCARB2-224ENST00000640880 INPP5FQ9Y2H2 1132 aa9.93□□□□□ -0.82
SCARB2-224ENST00000640880 TGFBR3LH3BV60 316 aa9.92□□□□□ -0.82
SCARB2-224ENST00000640880 HIF1AQ16665 826 aa9.92□□□□□ -0.82
SCARB2-224ENST00000640880 ZNF654Q8IZM8 581 aa9.92□□□□□ -0.82
SCARB2-224ENST00000640880 RACK1P63244 317 aaKnown RBP9.91□□□□□ -0.82
SCARB2-224ENST00000640880 NBPF1Q3BBV0 1214 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 SLC27A3Q5K4L6 730 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 USPL1Q5W0Q7 1092 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 GIMAP6Q6P9H5 292 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 PI16Q6UXB8 463 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 HS2ST1Q7LGA3 356 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 USP48Q86UV5 1035 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 AIDAQ96BJ3 306 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 LNPKQ9C0E8 428 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 C12orf49Q9H741 205 aa9.91□□□□□ -0.82
SCARB2-224ENST00000640880 FOXD3Q9UJU5 478 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-224ENST00000640880 PRDM2Q13029 1718 aa9.9□□□□□ -0.82
SCARB2-224ENST00000640880 WDR4P57081 412 aaKnown RBP9.9□□□□□ -0.82
SCARB2-224ENST00000640880 C4orf17Q53FE4 359 aa9.9□□□□□ -0.82
SCARB2-224ENST00000640880 CCDC74AQ96AQ1 378 aa9.9□□□□□ -0.82
SCARB2-224ENST00000640880 GMLQ99445 158 aa9.9□□□□□ -0.82
SCARB2-224ENST00000640880 KLF16Q9BXK1 252 aaPredicted RBP9.9□□□□□ -0.82
SCARB2-224ENST00000640880 CUEDC1Q9NWM3 386 aaPredicted RBP9.9□□□□□ -0.82
SCARB2-224ENST00000640880 ERCC6Q03468 1493 aa9.9□□□□□ -0.83
SCARB2-224ENST00000640880 CADPSQ9ULU8 1353 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 TNFRSF21O75509 655 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 IRS1P35568 1242 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 IDH3AP50213 366 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 PTPN12Q05209 780 aaKnown RBP9.89□□□□□ -0.83
SCARB2-224ENST00000640880 EPS8L3Q8TE67 593 aaKnown RBP9.89□□□□□ -0.83
SCARB2-224ENST00000640880 HSH2DQ96JZ2 352 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 SUSD3Q96L08 255 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 OSBPL7Q9BZF2 842 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 GRIP2Q9C0E4 1043 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 GGT7Q9UJ14 662 aa9.89□□□□□ -0.83
SCARB2-224ENST00000640880 GIPC1O14908 333 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 ARID5AQ03989 594 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 FOXC1Q12948 553 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 ZNF280CQ8ND82 737 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 SNX29Q8TEQ0 813 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 C7orf43Q8WVR3 580 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 ARMC5Q96C12 935 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 KLRG1Q96E93 195 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 ZDHHC3Q9NYG2 299 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 USP20Q9Y2K6 914 aa9.88□□□□□ -0.83
SCARB2-224ENST00000640880 TIMP2P16035 220 aa9.87□□□□□ -0.83
SCARB2-224ENST00000640880 GPC1P35052 558 aa9.87□□□□□ -0.83
SCARB2-224ENST00000640880 MEI1Q5TIA1 1274 aa9.87□□□□□ -0.83
SCARB2-224ENST00000640880 IER5Q5VY09 327 aa9.87□□□□□ -0.83
SCARB2-224ENST00000640880 SPRYD7Q5W111 196 aa9.87□□□□□ -0.83
SCARB2-224ENST00000640880 ZNF438Q7Z4V0 828 aa9.87□□□□□ -0.83
SCARB2-224ENST00000640880 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
SCARB2-224ENST00000640880 DMGDHQ9UI17 866 aaKnown RBP9.87□□□□□ -0.83
SCARB2-224ENST00000640880 FNDC3AQ9Y2H6 1198 aaKnown RBP9.87□□□□□ -0.83
SCARB2-224ENST00000640880 USP31Q70CQ4 1352 aa9.87□□□□□ -0.83
SCARB2-224ENST00000640880 TATP17735 454 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-224ENST00000640880 PHKA2P46019 1235 aa9.86□□□□□ -0.83
SCARB2-224ENST00000640880 ARSDP51689 593 aa9.86□□□□□ -0.83
SCARB2-224ENST00000640880 ZNF697Q5TEC3 545 aa9.86□□□□□ -0.83
SCARB2-224ENST00000640880 SNIP1Q8TAD8 396 aaKnown RBP9.86□□□□□ -0.83
SCARB2-224ENST00000640880 NESP48681 1621 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 UBAP1LF5GYI3 381 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 PHACTR2O75167 634 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 USP17L7P0C7H9 530 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 TAF1CQ15572 869 aaPredicted RBP9.85□□□□□ -0.83
SCARB2-224ENST00000640880 TRIP4Q15650 581 aaPredicted RBP9.85□□□□□ -0.83
SCARB2-224ENST00000640880 XKR5Q6UX68 686 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 BICDL1Q6ZP65 573 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 NOP9Q86U38 636 aaKnown RBP9.85□□□□□ -0.83
SCARB2-224ENST00000640880 CMTR1Q8N1G2 835 aaKnown RBP9.85□□□□□ -0.83
SCARB2-224ENST00000640880 ZFYVE28Q9HCC9 887 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 FAM8A1Q9UBU6 413 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 CCDC88BA6NC98 1476 aa9.85□□□□□ -0.83
SCARB2-224ENST00000640880 KIF21AQ7Z4S6 1674 aa9.84□□□□□ -0.83
SCARB2-224ENST00000640880 PDS5BQ9NTI5 1447 aa9.84□□□□□ -0.83
SCARB2-224ENST00000640880 PPM1GO15355 546 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-224ENST00000640880 RNF144AP50876 292 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-224ENST00000640880 CCDC144BQ3MJ40 725 aa9.84□□□□□ -0.83
SCARB2-224ENST00000640880 PDE12Q6L8Q7 609 aaKnown RBP9.84□□□□□ -0.83
SCARB2-224ENST00000640880 NBPF10Q6P3W6 841 aaKnown RBP9.84□□□□□ -0.83
SCARB2-224ENST00000640880 VPS37DQ86XT2 251 aa9.84□□□□□ -0.83
SCARB2-224ENST00000640880 MEIOBQ8N635 442 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms