RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 CREBZFQ9NS37 354 aa25.98■■□□□ 1.75
GABRD-216ENST00000640688 MKRN1Q9UHC7 482 aaKnown RBP25.98■■□□□ 1.75
GABRD-216ENST00000640688 IBTKQ9P2D0 1353 aaPredicted RBP25.97■■□□□ 1.75
GABRD-216ENST00000640688 PASKQ96RG2 1323 aa25.97■■□□□ 1.75
GABRD-216ENST00000640688 HOXA10P31260 410 aaPredicted RBP25.97■■□□□ 1.75
GABRD-216ENST00000640688 EAPPQ56P03 285 aaPredicted RBP25.97■■□□□ 1.75
GABRD-216ENST00000640688 LDHDQ86WU2 507 aa25.97■■□□□ 1.75
GABRD-216ENST00000640688 ADAMTSL1Q8N6G6 1762 aa25.97■■□□□ 1.75
GABRD-216ENST00000640688 RIC1Q4ADV7 1423 aa25.97■■□□□ 1.75
GABRD-216ENST00000640688 RNF123Q5XPI4 1314 aa25.96■■□□□ 1.75
GABRD-216ENST00000640688 RPGRQ92834 1020 aaKnown RBP25.96■■□□□ 1.75
GABRD-216ENST00000640688 PSMD1Q99460 953 aa25.96■■□□□ 1.75
GABRD-216ENST00000640688 ERBB4Q15303 1308 aa25.95■■□□□ 1.75
GABRD-216ENST00000640688 TCERG1O14776 1098 aaKnown RBP25.95■■□□□ 1.74
GABRD-216ENST00000640688 TMPOP42166 694 aaKnown RBP25.95■■□□□ 1.74
GABRD-216ENST00000640688 HACL1Q9UJ83 578 aa25.95■■□□□ 1.74
GABRD-216ENST00000640688 ITGBL1O95965 494 aaPredicted RBP25.94■■□□□ 1.74
GABRD-216ENST00000640688 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
GABRD-216ENST00000640688 EPHX2P34913 555 aa25.93■■□□□ 1.74
GABRD-216ENST00000640688 RALBP1Q15311 655 aa25.93■■□□□ 1.74
GABRD-216ENST00000640688 LTBP1Q14766 1721 aa25.92■■□□□ 1.74
GABRD-216ENST00000640688 CCDC146Q8IYE0 955 aa25.92■■□□□ 1.74
GABRD-216ENST00000640688 KRT24Q2M2I5 525 aa25.91■■□□□ 1.74
GABRD-216ENST00000640688 RBM17Q96I25 401 aaKnown RBP25.91■■□□□ 1.74
GABRD-216ENST00000640688 CRAMP1Q96RY5 1269 aa25.91■■□□□ 1.74
GABRD-216ENST00000640688 CLEC11AQ9Y240 323 aa25.91■■□□□ 1.74
GABRD-216ENST00000640688 ANKRD36CQ5JPF3 1778 aa25.9■■□□□ 1.74
GABRD-216ENST00000640688 PPEF1O14829 653 aaPredicted RBP25.9■■□□□ 1.74
GABRD-216ENST00000640688 NEUROD2Q15784 382 aa25.9■■□□□ 1.74
GABRD-216ENST00000640688 CC2D2BQ6DHV5 1058 aa25.9■■□□□ 1.74
GABRD-216ENST00000640688 PPP1R42Q7Z4L9 355 aa25.9■■□□□ 1.74
GABRD-216ENST00000640688 GPC2Q8N158 579 aa25.9■■□□□ 1.74
GABRD-216ENST00000640688 JDP2Q8WYK2 163 aa25.9■■□□□ 1.74
GABRD-216ENST00000640688 LAMB2P55268 1798 aa25.9■■□□□ 1.74
GABRD-216ENST00000640688 DDX10Q13206 875 aaKnown RBP25.89■■□□□ 1.74
GABRD-216ENST00000640688 PARP10Q53GL7 1025 aa25.89■■□□□ 1.74
GABRD-216ENST00000640688 TNS4Q8IZW8 715 aa25.89■■□□□ 1.74
GABRD-216ENST00000640688 GJA3Q9Y6H8 435 aa25.89■■□□□ 1.74
GABRD-216ENST00000640688 CNTNAP1P78357 1384 aa25.89■■□□□ 1.74
GABRD-216ENST00000640688 AIMP1Q12904 312 aaKnown RBP25.88■■□□□ 1.73
GABRD-216ENST00000640688 MAP1SQ66K74 1059 aaPredicted RBP25.88■■□□□ 1.73
GABRD-216ENST00000640688 COPS6Q7L5N1 327 aa25.88■■□□□ 1.73
GABRD-216ENST00000640688 UTP14AQ9BVJ6 771 aaKnown RBP25.88■■□□□ 1.73
GABRD-216ENST00000640688 BABAM1Q9NWV8 329 aa25.88■■□□□ 1.73
GABRD-216ENST00000640688 CAPN15O75808 1086 aa25.87■■□□□ 1.73
GABRD-216ENST00000640688 XAGE3Q8WTP9 111 aa25.87■■□□□ 1.73
GABRD-216ENST00000640688 ZNF428Q96B54 188 aa25.87■■□□□ 1.73
GABRD-216ENST00000640688 NLRP3Q96P20 1036 aa25.87■■□□□ 1.73
GABRD-216ENST00000640688 EIF6P56537 245 aaKnown RBP25.86■■□□□ 1.73
GABRD-216ENST00000640688 SLC10A5Q5PT55 438 aa25.86■■□□□ 1.73
GABRD-216ENST00000640688 LARGE2Q8N3Y3 721 aa25.86■■□□□ 1.73
GABRD-216ENST00000640688 TRIM35Q9UPQ4 493 aa25.86■■□□□ 1.73
GABRD-216ENST00000640688 ABCC4O15439 1325 aa25.86■■□□□ 1.73
GABRD-216ENST00000640688 TMEM88BA6NKF7 163 aa25.85■■□□□ 1.73
GABRD-216ENST00000640688 LMOD3Q0VAK6 560 aa25.85■■□□□ 1.73
GABRD-216ENST00000640688 CNTROBQ8N137 903 aa25.85■■□□□ 1.73
GABRD-216ENST00000640688 MYBBP1AQ9BQG0 1328 aaKnown RBP25.85■■□□□ 1.73
GABRD-216ENST00000640688 HCLS1P14317 486 aaPredicted RBP25.84■■□□□ 1.73
GABRD-216ENST00000640688 TAF1P21675 1872 aa25.84■■□□□ 1.73
GABRD-216ENST00000640688 EPS15P42566 896 aa25.84■■□□□ 1.73
GABRD-216ENST00000640688 SCNN1DP51172 638 aa25.84■■□□□ 1.73
GABRD-216ENST00000640688 PNMA8AQ86V59 439 aaPredicted RBP25.84■■□□□ 1.73
GABRD-216ENST00000640688 NLRP10Q86W26 655 aa25.84■■□□□ 1.73
GABRD-216ENST00000640688 CHL1O00533 1208 aa25.83■■□□□ 1.73
GABRD-216ENST00000640688 VEGFBP49765 207 aa25.83■■□□□ 1.73
GABRD-216ENST00000640688 AOC3Q16853 763 aa25.83■■□□□ 1.73
GABRD-216ENST00000640688 ATP6V0A2Q9Y487 856 aa25.83■■□□□ 1.73
GABRD-216ENST00000640688 LAS1LQ9Y4W2 734 aaKnown RBP25.83■■□□□ 1.73
GABRD-216ENST00000640688 GRIPAP1Q4V328 841 aa25.82■■□□□ 1.72
GABRD-216ENST00000640688 PPIP5K2O43314 1243 aa25.81■■□□□ 1.72
GABRD-216ENST00000640688 FMR1Q06787 632 aaKnown RBP eCLIP25.81■■□□□ 1.72
GABRD-216ENST00000640688 FOXN1O15353 648 aa25.8■■□□□ 1.72
GABRD-216ENST00000640688 TCIRG1Q13488 830 aa25.8■■□□□ 1.72
GABRD-216ENST00000640688 NIM1KQ8IY84 436 aa25.8■■□□□ 1.72
GABRD-216ENST00000640688 RUNDC1Q96C34 613 aa25.8■■□□□ 1.72
GABRD-216ENST00000640688 DDX21Q9NR30 783 aaKnown RBP eCLIP25.8■■□□□ 1.72
GABRD-216ENST00000640688 CHPF2Q9P2E5 772 aa25.8■■□□□ 1.72
GABRD-216ENST00000640688 TRMT112Q9UI30 125 aaKnown RBP25.79■■□□□ 1.72
GABRD-216ENST00000640688 ADAMTS8Q9UP79 889 aa25.79■■□□□ 1.72
GABRD-216ENST00000640688 LMOD1P29536 600 aaPredicted RBP25.78■■□□□ 1.72
GABRD-216ENST00000640688 HSP90AB3PQ58FF7 597 aa25.78■■□□□ 1.72
GABRD-216ENST00000640688 DDX60Q8IY21 1712 aaKnown RBP25.77■■□□□ 1.72
GABRD-216ENST00000640688 WDR43Q15061 677 aaKnown RBP eCLIP25.76■■□□□ 1.71
GABRD-216ENST00000640688 RTFDC1Q9BY42 306 aaPredicted RBP25.76■■□□□ 1.71
GABRD-216ENST00000640688 SH3TC1Q8TE82 1336 aa25.75■■□□□ 1.71
GABRD-216ENST00000640688 CXCL9Q07325 125 aa25.75■■□□□ 1.71
GABRD-216ENST00000640688 HDGFL1Q5TGJ6 251 aa25.75■■□□□ 1.71
GABRD-216ENST00000640688 SP8Q8IXZ3 490 aa25.75■■□□□ 1.71
GABRD-216ENST00000640688 COL4A1P02462 1669 aa25.74■■□□□ 1.71
GABRD-216ENST00000640688 RASSF10A6NK89 507 aa25.74■■□□□ 1.71
GABRD-216ENST00000640688 BBOX1O75936 387 aa25.74■■□□□ 1.71
GABRD-216ENST00000640688 DPP8Q6V1X1 898 aaPredicted RBP25.74■■□□□ 1.71
GABRD-216ENST00000640688 TMX4Q9H1E5 349 aaPredicted RBP25.74■■□□□ 1.71
GABRD-216ENST00000640688 DEFB115Q30KQ5 88 aa25.73■■□□□ 1.71
GABRD-216ENST00000640688 DDX46Q7L014 1031 aaKnown RBP25.73■■□□□ 1.71
GABRD-216ENST00000640688 MPNDQ8N594 471 aa25.73■■□□□ 1.71
GABRD-216ENST00000640688 DUOX1Q9NRD9 1551 aa25.73■■□□□ 1.71
GABRD-216ENST00000640688 TRAF5O00463 557 aa25.72■■□□□ 1.71
GABRD-216ENST00000640688 GRAPQ13588 217 aa25.72■■□□□ 1.71
GABRD-216ENST00000640688 USP50Q70EL3 339 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms