RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 FZD9O00144 591 aa20.43■□□□□ 0.86
SNRNP48-203ENST00000634363 ITGBL1O95965 494 aaPredicted RBP20.43■□□□□ 0.86
SNRNP48-203ENST00000634363 SUSD4Q5VX71 490 aa20.43■□□□□ 0.86
SNRNP48-203ENST00000634363 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
SNRNP48-203ENST00000634363 GJA3Q9Y6H8 435 aa20.43■□□□□ 0.86
SNRNP48-203ENST00000634363 ABCC12Q96J65 1359 aa20.43■□□□□ 0.86
SNRNP48-203ENST00000634363 CRY2Q49AN0 593 aa20.42■□□□□ 0.86
SNRNP48-203ENST00000634363 PNMA8AQ86V59 439 aaPredicted RBP20.42■□□□□ 0.86
SNRNP48-203ENST00000634363 MAPK8IP3Q9UPT6 1336 aa20.42■□□□□ 0.86
SNRNP48-203ENST00000634363 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
SNRNP48-203ENST00000634363 MAP1SQ66K74 1059 aaPredicted RBP20.41■□□□□ 0.86
SNRNP48-203ENST00000634363 CNTROBQ8N137 903 aa20.41■□□□□ 0.86
SNRNP48-203ENST00000634363 GPC2Q8N158 579 aa20.41■□□□□ 0.86
SNRNP48-203ENST00000634363 PSMD1Q99460 953 aa20.41■□□□□ 0.86
SNRNP48-203ENST00000634363 PNNQ9H307 717 aaKnown RBP20.41■□□□□ 0.86
SNRNP48-203ENST00000634363 CNTNAP1P78357 1384 aa20.41■□□□□ 0.86
SNRNP48-203ENST00000634363 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
SNRNP48-203ENST00000634363 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
SNRNP48-203ENST00000634363 CC2D2BQ6DHV5 1058 aa20.4■□□□□ 0.86
SNRNP48-203ENST00000634363 UBN2Q6ZU65 1347 aa20.4■□□□□ 0.86
SNRNP48-203ENST00000634363 RBM17Q96I25 401 aaKnown RBP20.4■□□□□ 0.86
SNRNP48-203ENST00000634363 FOXN1O15353 648 aa20.39■□□□□ 0.85
SNRNP48-203ENST00000634363 VEGFBP49765 207 aa20.39■□□□□ 0.85
SNRNP48-203ENST00000634363 LARGE2Q8N3Y3 721 aa20.39■□□□□ 0.85
SNRNP48-203ENST00000634363 HOXA10P31260 410 aaPredicted RBP20.38■□□□□ 0.85
SNRNP48-203ENST00000634363 GIGYF2Q6Y7W6 1299 aaKnown RBP20.38■□□□□ 0.85
SNRNP48-203ENST00000634363 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
SNRNP48-203ENST00000634363 ZNF34Q8IZ26 560 aa20.38■□□□□ 0.85
SNRNP48-203ENST00000634363 TSPYL4Q9UJ04 414 aa20.38■□□□□ 0.85
SNRNP48-203ENST00000634363 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
SNRNP48-203ENST00000634363 SLC51AQ86UW1 340 aa20.37■□□□□ 0.85
SNRNP48-203ENST00000634363 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
SNRNP48-203ENST00000634363 CRAMP1Q96RY5 1269 aa20.37■□□□□ 0.85
SNRNP48-203ENST00000634363 TMX4Q9H1E5 349 aaPredicted RBP20.37■□□□□ 0.85
SNRNP48-203ENST00000634363 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
SNRNP48-203ENST00000634363 DEFB115Q30KQ5 88 aa20.36■□□□□ 0.85
SNRNP48-203ENST00000634363 NLRP3Q96P20 1036 aa20.36■□□□□ 0.85
SNRNP48-203ENST00000634363 NTSR2O95665 410 aa20.35■□□□□ 0.85
SNRNP48-203ENST00000634363 ANXA1P04083 346 aa20.35■□□□□ 0.85
SNRNP48-203ENST00000634363 RIPK4P57078 832 aa20.35■□□□□ 0.85
SNRNP48-203ENST00000634363 GRIPAP1Q4V328 841 aa20.35■□□□□ 0.85
SNRNP48-203ENST00000634363 C3orf67Q6ZVT6 689 aa20.35■□□□□ 0.85
SNRNP48-203ENST00000634363 NECTIN2Q92692 538 aa20.35■□□□□ 0.85
SNRNP48-203ENST00000634363 ABT1Q9ULW3 272 aaKnown RBP20.35■□□□□ 0.85
SNRNP48-203ENST00000634363 ADAMTSL1Q8N6G6 1762 aa20.34■□□□□ 0.85
SNRNP48-203ENST00000634363 EPS15P42566 896 aa20.34■□□□□ 0.85
SNRNP48-203ENST00000634363 NIM1KQ8IY84 436 aa20.34■□□□□ 0.85
SNRNP48-203ENST00000634363 COL4A5P29400 1685 aa20.34■□□□□ 0.85
SNRNP48-203ENST00000634363 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
SNRNP48-203ENST00000634363 AIMP1Q12904 312 aaKnown RBP20.33■□□□□ 0.85
SNRNP48-203ENST00000634363 PARP10Q53GL7 1025 aa20.33■□□□□ 0.85
SNRNP48-203ENST00000634363 UTP14AQ9BVJ6 771 aaKnown RBP20.33■□□□□ 0.85
SNRNP48-203ENST00000634363 IBTKQ9P2D0 1353 aaPredicted RBP20.33■□□□□ 0.84
SNRNP48-203ENST00000634363 ERBB4Q15303 1308 aa20.32■□□□□ 0.84
SNRNP48-203ENST00000634363 PPIP5K2O43314 1243 aa20.32■□□□□ 0.84
SNRNP48-203ENST00000634363 CTCFP49711 727 aaPredicted RBP20.32■□□□□ 0.84
SNRNP48-203ENST00000634363 FMR1Q06787 632 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNRNP48-203ENST00000634363 PDIA6Q15084 440 aa20.32■□□□□ 0.84
SNRNP48-203ENST00000634363 AOC3Q16853 763 aa20.32■□□□□ 0.84
SNRNP48-203ENST00000634363 PROSER3Q2NL68 480 aa20.32■□□□□ 0.84
SNRNP48-203ENST00000634363 SCNN1DP51172 638 aa20.31■□□□□ 0.84
SNRNP48-203ENST00000634363 DDX21Q9NR30 783 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNRNP48-203ENST00000634363 RIC1Q4ADV7 1423 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 RASSF10A6NK89 507 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 LBX1P52954 281 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 GRM1Q13255 1194 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 NEUROD2Q15784 382 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 PAXIP1Q6ZW49 1069 aaPredicted RBP20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 COPS6Q7L5N1 327 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 MRS2Q9HD23 443 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 WBP1LQ9NX94 342 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 LTBP1Q14766 1721 aa20.3■□□□□ 0.84
SNRNP48-203ENST00000634363 WDR33Q9C0J8 1336 aaKnown RBP20.29■□□□□ 0.84
SNRNP48-203ENST00000634363 HCLS1P14317 486 aaPredicted RBP20.29■□□□□ 0.84
SNRNP48-203ENST00000634363 SLC10A5Q5PT55 438 aa20.29■□□□□ 0.84
SNRNP48-203ENST00000634363 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
SNRNP48-203ENST00000634363 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
SNRNP48-203ENST00000634363 TMPOP42166 694 aaKnown RBP20.28■□□□□ 0.84
SNRNP48-203ENST00000634363 USP50Q70EL3 339 aaPredicted RBP20.28■□□□□ 0.84
SNRNP48-203ENST00000634363 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
SNRNP48-203ENST00000634363 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
SNRNP48-203ENST00000634363 LAS1LQ9Y4W2 734 aaKnown RBP20.28■□□□□ 0.84
SNRNP48-203ENST00000634363 XAGE3Q8WTP9 111 aa20.27■□□□□ 0.84
SNRNP48-203ENST00000634363 ABCC4O15439 1325 aa20.27■□□□□ 0.83
SNRNP48-203ENST00000634363 TRAF5O00463 557 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 BBOX1O75936 387 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 LMOD3Q0VAK6 560 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 DPP8Q6V1X1 898 aaPredicted RBP20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 MPNDQ8N594 471 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 SUPT20HQ8NEM7 779 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 RUNDC1Q96C34 613 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 TRMT112Q9UI30 125 aaKnown RBP20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 ZNRF3Q9ULT6 936 aa20.26■□□□□ 0.83
SNRNP48-203ENST00000634363 MAP2K1Q02750 393 aaPredicted RBP20.25■□□□□ 0.83
SNRNP48-203ENST00000634363 CXCL9Q07325 125 aa20.25■□□□□ 0.83
SNRNP48-203ENST00000634363 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms