RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 HOXA10P31260 410 aaPredicted RBP20.23■□□□□ 0.83
GTF2I-220ENST00000621640 PDIA6Q15084 440 aa20.23■□□□□ 0.83
GTF2I-220ENST00000621640 PSMD1Q99460 953 aa20.23■□□□□ 0.83
GTF2I-220ENST00000621640 GIGYF2Q6Y7W6 1299 aaKnown RBP20.22■□□□□ 0.83
GTF2I-220ENST00000621640 C3orf67Q6ZVT6 689 aa20.22■□□□□ 0.83
GTF2I-220ENST00000621640 RPGRQ92834 1020 aaKnown RBP20.21■□□□□ 0.83
GTF2I-220ENST00000621640 MKRN1Q9UHC7 482 aaKnown RBP20.21■□□□□ 0.83
GTF2I-220ENST00000621640 HACL1Q9UJ83 578 aa20.21■□□□□ 0.83
GTF2I-220ENST00000621640 EPHX2P34913 555 aa20.2■□□□□ 0.82
GTF2I-220ENST00000621640 RIPK4P57078 832 aa20.2■□□□□ 0.82
GTF2I-220ENST00000621640 PROSER3Q2NL68 480 aa20.2■□□□□ 0.82
GTF2I-220ENST00000621640 CC2D2BQ6DHV5 1058 aa20.2■□□□□ 0.82
GTF2I-220ENST00000621640 RNF123Q5XPI4 1314 aa20.2■□□□□ 0.82
GTF2I-220ENST00000621640 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
GTF2I-220ENST00000621640 EAPPQ56P03 285 aaPredicted RBP20.19■□□□□ 0.82
GTF2I-220ENST00000621640 GPC2Q8N158 579 aa20.19■□□□□ 0.82
GTF2I-220ENST00000621640 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
GTF2I-220ENST00000621640 ANXA1P04083 346 aa20.18■□□□□ 0.82
GTF2I-220ENST00000621640 EIF2S2P20042 333 aaKnown RBP20.18■□□□□ 0.82
GTF2I-220ENST00000621640 TMPOP42166 694 aaKnown RBP20.18■□□□□ 0.82
GTF2I-220ENST00000621640 RALBP1Q15311 655 aa20.18■□□□□ 0.82
GTF2I-220ENST00000621640 PARP10Q53GL7 1025 aa20.18■□□□□ 0.82
GTF2I-220ENST00000621640 CNTNAP1P78357 1384 aa20.18■□□□□ 0.82
GTF2I-220ENST00000621640 PPEF1O14829 653 aaPredicted RBP20.17■□□□□ 0.82
GTF2I-220ENST00000621640 JDP2Q8WYK2 163 aa20.17■□□□□ 0.82
GTF2I-220ENST00000621640 RBM17Q96I25 401 aaKnown RBP20.17■□□□□ 0.82
GTF2I-220ENST00000621640 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
GTF2I-220ENST00000621640 LTBP1Q14766 1721 aa20.16■□□□□ 0.82
GTF2I-220ENST00000621640 PPP1R42Q7Z4L9 355 aa20.16■□□□□ 0.82
GTF2I-220ENST00000621640 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
GTF2I-220ENST00000621640 GRIPAP1Q4V328 841 aa20.15■□□□□ 0.82
GTF2I-220ENST00000621640 PNMA8AQ86V59 439 aaPredicted RBP20.15■□□□□ 0.82
GTF2I-220ENST00000621640 TMEM88BA6NKF7 163 aa20.14■□□□□ 0.81
GTF2I-220ENST00000621640 TCERG1O14776 1098 aaKnown RBP20.14■□□□□ 0.81
GTF2I-220ENST00000621640 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
GTF2I-220ENST00000621640 SLC10A5Q5PT55 438 aa20.14■□□□□ 0.81
GTF2I-220ENST00000621640 UTP14AQ9BVJ6 771 aaKnown RBP20.14■□□□□ 0.81
GTF2I-220ENST00000621640 ANKRD36CQ5JPF3 1778 aa20.13■□□□□ 0.81
GTF2I-220ENST00000621640 EIF6P56537 245 aaKnown RBP20.13■□□□□ 0.81
GTF2I-220ENST00000621640 KRT24Q2M2I5 525 aa20.13■□□□□ 0.81
GTF2I-220ENST00000621640 MAP1SQ66K74 1059 aaPredicted RBP20.13■□□□□ 0.81
GTF2I-220ENST00000621640 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
GTF2I-220ENST00000621640 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
GTF2I-220ENST00000621640 NLRP3Q96P20 1036 aa20.13■□□□□ 0.81
GTF2I-220ENST00000621640 CLEC11AQ9Y240 323 aa20.13■□□□□ 0.81
GTF2I-220ENST00000621640 GJA3Q9Y6H8 435 aa20.13■□□□□ 0.81
GTF2I-220ENST00000621640 MYBBP1AQ9BQG0 1328 aaKnown RBP20.12■□□□□ 0.81
GTF2I-220ENST00000621640 SCNN1DP51172 638 aa20.12■□□□□ 0.81
GTF2I-220ENST00000621640 COPS6Q7L5N1 327 aa20.12■□□□□ 0.81
GTF2I-220ENST00000621640 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
GTF2I-220ENST00000621640 CNTROBQ8N137 903 aa20.12■□□□□ 0.81
GTF2I-220ENST00000621640 XAGE3Q8WTP9 111 aa20.12■□□□□ 0.81
GTF2I-220ENST00000621640 ATP6V0A2Q9Y487 856 aa20.12■□□□□ 0.81
GTF2I-220ENST00000621640 LAMB2P55268 1798 aa20.11■□□□□ 0.81
GTF2I-220ENST00000621640 ABCC4O15439 1325 aa20.11■□□□□ 0.81
GTF2I-220ENST00000621640 CHL1O00533 1208 aa20.11■□□□□ 0.81
GTF2I-220ENST00000621640 NLRP10Q86W26 655 aa20.11■□□□□ 0.81
GTF2I-220ENST00000621640 VEGFBP49765 207 aa20.1■□□□□ 0.81
GTF2I-220ENST00000621640 AIMP1Q12904 312 aaKnown RBP20.1■□□□□ 0.81
GTF2I-220ENST00000621640 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
GTF2I-220ENST00000621640 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
GTF2I-220ENST00000621640 CAPN15O75808 1086 aa20.09■□□□□ 0.81
GTF2I-220ENST00000621640 HCLS1P14317 486 aaPredicted RBP20.09■□□□□ 0.81
GTF2I-220ENST00000621640 EPS15P42566 896 aa20.09■□□□□ 0.81
GTF2I-220ENST00000621640 DDX10Q13206 875 aaKnown RBP20.09■□□□□ 0.81
GTF2I-220ENST00000621640 AOC3Q16853 763 aa20.09■□□□□ 0.81
GTF2I-220ENST00000621640 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
GTF2I-220ENST00000621640 NIM1KQ8IY84 436 aa20.09■□□□□ 0.81
GTF2I-220ENST00000621640 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.81
GTF2I-220ENST00000621640 FOXN1O15353 648 aa20.08■□□□□ 0.81
GTF2I-220ENST00000621640 PPIP5K2O43314 1243 aa20.08■□□□□ 0.81
GTF2I-220ENST00000621640 LMOD1P29536 600 aaPredicted RBP20.08■□□□□ 0.81
GTF2I-220ENST00000621640 RTFDC1Q9BY42 306 aaPredicted RBP20.08■□□□□ 0.81
GTF2I-220ENST00000621640 RASSF10A6NK89 507 aa20.07■□□□□ 0.8
GTF2I-220ENST00000621640 TCIRG1Q13488 830 aa20.07■□□□□ 0.8
GTF2I-220ENST00000621640 RUNDC1Q96C34 613 aa20.07■□□□□ 0.8
GTF2I-220ENST00000621640 CHPF2Q9P2E5 772 aa20.07■□□□□ 0.8
GTF2I-220ENST00000621640 VPS33BQ9H267 617 aa20.06■□□□□ 0.8
GTF2I-220ENST00000621640 SH3TC1Q8TE82 1336 aa20.05■□□□□ 0.8
GTF2I-220ENST00000621640 BBOX1O75936 387 aa20.05■□□□□ 0.8
GTF2I-220ENST00000621640 FMR1Q06787 632 aaKnown RBP eCLIP20.05■□□□□ 0.8
GTF2I-220ENST00000621640 TMX4Q9H1E5 349 aaPredicted RBP20.05■□□□□ 0.8
GTF2I-220ENST00000621640 TRMT112Q9UI30 125 aaKnown RBP20.05■□□□□ 0.8
GTF2I-220ENST00000621640 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
GTF2I-220ENST00000621640 DUOX1Q9NRD9 1551 aa20.04■□□□□ 0.8
GTF2I-220ENST00000621640 CXCL9Q07325 125 aa20.04■□□□□ 0.8
GTF2I-220ENST00000621640 USP50Q70EL3 339 aaPredicted RBP20.04■□□□□ 0.8
GTF2I-220ENST00000621640 SP8Q8IXZ3 490 aa20.04■□□□□ 0.8
GTF2I-220ENST00000621640 ZNF428Q96B54 188 aa20.04■□□□□ 0.8
GTF2I-220ENST00000621640 GPRC5DQ9NZD1 345 aa20.04■□□□□ 0.8
GTF2I-220ENST00000621640 ZNRF3Q9ULT6 936 aa20.04■□□□□ 0.8
GTF2I-220ENST00000621640 ADAMTS8Q9UP79 889 aa20.04■□□□□ 0.8
GTF2I-220ENST00000621640 DDX60Q8IY21 1712 aaKnown RBP20.04■□□□□ 0.8
GTF2I-220ENST00000621640 LRRC37AA6NMS7 1700 aa20.03■□□□□ 0.8
GTF2I-220ENST00000621640 GRAPQ13588 217 aa20.03■□□□□ 0.8
GTF2I-220ENST00000621640 WDR43Q15061 677 aaKnown RBP eCLIP20.03■□□□□ 0.8
GTF2I-220ENST00000621640 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
GTF2I-220ENST00000621640 DPP8Q6V1X1 898 aaPredicted RBP20.03■□□□□ 0.8
GTF2I-220ENST00000621640 SUPT20HQ8NEM7 779 aa20.03■□□□□ 0.8
GTF2I-220ENST00000621640 PLBD2Q8NHP8 589 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms