RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 IARSP41252 1262 aaKnown RBP23.3■■□□□ 1.32
SSBP1-215ENST00000612337 PPP1R42Q7Z4L9 355 aa23.3■■□□□ 1.32
SSBP1-215ENST00000612337 ZNF541Q9H0D2 1346 aa23.3■■□□□ 1.32
SSBP1-215ENST00000612337 POTEIP0CG38 1075 aa23.29■■□□□ 1.32
SSBP1-215ENST00000612337 POTEJP0CG39 1038 aa23.29■■□□□ 1.32
SSBP1-215ENST00000612337 PROSER3Q2NL68 480 aa23.29■■□□□ 1.32
SSBP1-215ENST00000612337 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
SSBP1-215ENST00000612337 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
SSBP1-215ENST00000612337 RBM17Q96I25 401 aaKnown RBP23.28■■□□□ 1.32
SSBP1-215ENST00000612337 CRAMP1Q96RY5 1269 aa23.28■■□□□ 1.32
SSBP1-215ENST00000612337 TAF1DQ9H5J8 278 aaPredicted RBP23.28■■□□□ 1.32
SSBP1-215ENST00000612337 FZD9O00144 591 aa23.27■■□□□ 1.32
SSBP1-215ENST00000612337 ANXA1P04083 346 aa23.27■■□□□ 1.32
SSBP1-215ENST00000612337 GRIPAP1Q4V328 841 aa23.27■■□□□ 1.32
SSBP1-215ENST00000612337 RUNDC1Q96C34 613 aa23.27■■□□□ 1.32
SSBP1-215ENST00000612337 CHL1O00533 1208 aa23.26■■□□□ 1.31
SSBP1-215ENST00000612337 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
SSBP1-215ENST00000612337 LDHDQ86WU2 507 aa23.26■■□□□ 1.31
SSBP1-215ENST00000612337 UTP14AQ9BVJ6 771 aaKnown RBP23.26■■□□□ 1.31
SSBP1-215ENST00000612337 SLC10A5Q5PT55 438 aa23.25■■□□□ 1.31
SSBP1-215ENST00000612337 C3orf67Q6ZVT6 689 aa23.25■■□□□ 1.31
SSBP1-215ENST00000612337 JDP2Q8WYK2 163 aa23.25■■□□□ 1.31
SSBP1-215ENST00000612337 NLRP3Q96P20 1036 aa23.25■■□□□ 1.31
SSBP1-215ENST00000612337 TRIM35Q9UPQ4 493 aa23.25■■□□□ 1.31
SSBP1-215ENST00000612337 HSP90AB3PQ58FF7 597 aa23.24■■□□□ 1.31
SSBP1-215ENST00000612337 COPS6Q7L5N1 327 aa23.24■■□□□ 1.31
SSBP1-215ENST00000612337 NECTIN2Q92692 538 aa23.24■■□□□ 1.31
SSBP1-215ENST00000612337 CREBZFQ9NS37 354 aa23.24■■□□□ 1.31
SSBP1-215ENST00000612337 HACL1Q9UJ83 578 aa23.24■■□□□ 1.31
SSBP1-215ENST00000612337 RNF123Q5XPI4 1314 aa23.24■■□□□ 1.31
SSBP1-215ENST00000612337 ANKRD36CQ5JPF3 1778 aa23.24■■□□□ 1.31
SSBP1-215ENST00000612337 PPEF1O14829 653 aaPredicted RBP23.23■■□□□ 1.31
SSBP1-215ENST00000612337 GPC2Q8N158 579 aa23.23■■□□□ 1.31
SSBP1-215ENST00000612337 XAGE3Q8WTP9 111 aa23.23■■□□□ 1.31
SSBP1-215ENST00000612337 DDX21Q9NR30 783 aaKnown RBP eCLIP23.23■■□□□ 1.31
SSBP1-215ENST00000612337 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
SSBP1-215ENST00000612337 AIMP1Q12904 312 aaKnown RBP23.22■■□□□ 1.31
SSBP1-215ENST00000612337 KRT24Q2M2I5 525 aa23.22■■□□□ 1.31
SSBP1-215ENST00000612337 EPHX2P34913 555 aa23.21■■□□□ 1.31
SSBP1-215ENST00000612337 LAS1LQ9Y4W2 734 aaKnown RBP23.21■■□□□ 1.31
SSBP1-215ENST00000612337 PASKQ96RG2 1323 aa23.21■■□□□ 1.31
SSBP1-215ENST00000612337 COL4A5P29400 1685 aa23.21■■□□□ 1.31
SSBP1-215ENST00000612337 EIF6P56537 245 aaKnown RBP23.2■■□□□ 1.3
SSBP1-215ENST00000612337 EAPPQ56P03 285 aaPredicted RBP23.2■■□□□ 1.3
SSBP1-215ENST00000612337 NLRP10Q86W26 655 aa23.2■■□□□ 1.3
SSBP1-215ENST00000612337 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
SSBP1-215ENST00000612337 HOXB7P09629 217 aa23.19■■□□□ 1.3
SSBP1-215ENST00000612337 TCIRG1Q13488 830 aa23.19■■□□□ 1.3
SSBP1-215ENST00000612337 SLC51AQ86UW1 340 aa23.19■■□□□ 1.3
SSBP1-215ENST00000612337 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
SSBP1-215ENST00000612337 LARGE2Q8N3Y3 721 aa23.19■■□□□ 1.3
SSBP1-215ENST00000612337 PRKRIP1Q9H875 184 aaPredicted RBP23.19■■□□□ 1.3
SSBP1-215ENST00000612337 ADAMTSL1Q8N6G6 1762 aa23.19■■□□□ 1.3
SSBP1-215ENST00000612337 ABCC4O15439 1325 aa23.18■■□□□ 1.3
SSBP1-215ENST00000612337 TMX4Q9H1E5 349 aaPredicted RBP23.18■■□□□ 1.3
SSBP1-215ENST00000612337 CHPF2Q9P2E5 772 aa23.18■■□□□ 1.3
SSBP1-215ENST00000612337 ATP6V0A2Q9Y487 856 aa23.18■■□□□ 1.3
SSBP1-215ENST00000612337 ITGBL1O95965 494 aaPredicted RBP23.17■■□□□ 1.3
SSBP1-215ENST00000612337 HDGFL1Q5TGJ6 251 aa23.17■■□□□ 1.3
SSBP1-215ENST00000612337 CFAP44Q96MT7 982 aa23.17■■□□□ 1.3
SSBP1-215ENST00000612337 CLEC11AQ9Y240 323 aa23.17■■□□□ 1.3
SSBP1-215ENST00000612337 LAMB2P55268 1798 aa23.17■■□□□ 1.3
SSBP1-215ENST00000612337 COL13A1Q5TAT6 717 aaPredicted RBP23.16■■□□□ 1.3
SSBP1-215ENST00000612337 TRMT112Q9UI30 125 aaKnown RBP23.16■■□□□ 1.3
SSBP1-215ENST00000612337 GJA3Q9Y6H8 435 aa23.16■■□□□ 1.3
SSBP1-215ENST00000612337 SH3TC1Q8TE82 1336 aa23.15■■□□□ 1.3
SSBP1-215ENST00000612337 HSPA1AP0DMV8 641 aaKnown RBP23.15■■□□□ 1.3
SSBP1-215ENST00000612337 HSPA1BP0DMV9 641 aaKnown RBP23.15■■□□□ 1.3
SSBP1-215ENST00000612337 HCLS1P14317 486 aaPredicted RBP23.15■■□□□ 1.3
SSBP1-215ENST00000612337 VPS33BQ9H267 617 aa23.15■■□□□ 1.3
SSBP1-215ENST00000612337 MKRN1Q9UHC7 482 aaKnown RBP23.15■■□□□ 1.3
SSBP1-215ENST00000612337 PPIP5K2O43314 1243 aa23.14■■□□□ 1.29
SSBP1-215ENST00000612337 BBOX1O75936 387 aa23.14■■□□□ 1.29
SSBP1-215ENST00000612337 NIM1KQ8IY84 436 aa23.14■■□□□ 1.29
SSBP1-215ENST00000612337 PLBD2Q8NHP8 589 aa23.14■■□□□ 1.29
SSBP1-215ENST00000612337 DBF4Q9UBU7 674 aaPredicted RBP23.14■■□□□ 1.29
SSBP1-215ENST00000612337 TMEM88BA6NKF7 163 aa23.13■■□□□ 1.29
SSBP1-215ENST00000612337 LMOD1P29536 600 aaPredicted RBP23.13■■□□□ 1.29
SSBP1-215ENST00000612337 ANKRD13DQ6ZTN6 518 aa23.13■■□□□ 1.29
SSBP1-215ENST00000612337 SP8Q8IXZ3 490 aa23.13■■□□□ 1.29
SSBP1-215ENST00000612337 RTFDC1Q9BY42 306 aaPredicted RBP23.13■■□□□ 1.29
SSBP1-215ENST00000612337 CNTNAP1P78357 1384 aa23.13■■□□□ 1.29
SSBP1-215ENST00000612337 LTBP1Q14766 1721 aa23.12■■□□□ 1.29
SSBP1-215ENST00000612337 DDX46Q7L014 1031 aaKnown RBP23.12■■□□□ 1.29
SSBP1-215ENST00000612337 CNTROBQ8N137 903 aa23.12■■□□□ 1.29
SSBP1-215ENST00000612337 SUPT20HQ8NEM7 779 aa23.12■■□□□ 1.29
SSBP1-215ENST00000612337 ZNF853P0CG23 659 aa23.11■■□□□ 1.29
SSBP1-215ENST00000612337 SCNN1DP51172 638 aa23.11■■□□□ 1.29
SSBP1-215ENST00000612337 GRAPQ13588 217 aa23.11■■□□□ 1.29
SSBP1-215ENST00000612337 AOC3Q16853 763 aa23.11■■□□□ 1.29
SSBP1-215ENST00000612337 DUSP27Q5VZP5 1158 aa23.11■■□□□ 1.29
SSBP1-215ENST00000612337 GRAPLQ8TC17 118 aaPredicted RBP23.11■■□□□ 1.29
SSBP1-215ENST00000612337 ISCA1Q9BUE6 129 aa23.11■■□□□ 1.29
SSBP1-215ENST00000612337 MBIPQ9NS73 344 aa23.11■■□□□ 1.29
SSBP1-215ENST00000612337 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
SSBP1-215ENST00000612337 MAP1SQ66K74 1059 aaPredicted RBP23.1■■□□□ 1.29
SSBP1-215ENST00000612337 DPP8Q6V1X1 898 aaPredicted RBP23.1■■□□□ 1.29
SSBP1-215ENST00000612337 MPNDQ8N594 471 aa23.09■■□□□ 1.29
SSBP1-215ENST00000612337 IFT57Q9NWB7 429 aa23.09■■□□□ 1.29
SSBP1-215ENST00000612337 DDX60Q8IY21 1712 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms