RNA–Protein interactions for RNA: ENST00000605910.1

TRAM2-AS1-202, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 3 BASIC

Gene TRAM2-AS1, Length 1,053 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-202ENST00000605910 HOXB7P09629 217 aa11.87□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 POLD1P28340 1107 aa11.87□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 INTS5Q6P9B9 1019 aaKnown RBP11.87□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 RFC4P35249 363 aa11.86□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 COL23A1Q86Y22 540 aaPredicted RBP11.86□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 PCNTO95613 3336 aa11.85□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 MYH16Q9H6N6 1097 aa11.85□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 MBIPQ9NS73 344 aa11.85□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 COL24A1Q17RW2 1714 aa11.84□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 PHF14O94880 888 aa11.84□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 CANXP27824 592 aaKnown RBP11.84□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 NLGN1Q8N2Q7 840 aa11.84□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
TRAM2-AS1-202ENST00000605910 ZPR1O75312 459 aa11.83□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 A1BGP04217 495 aa11.83□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 EIF5P55010 431 aaKnown RBP11.83□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 ZBTB1Q9Y2K1 713 aa11.83□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 TUBGCP6Q96RT7 1819 aa11.82□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 ZNF521Q96K83 1311 aa11.82□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 LAMB4A4D0S4 1761 aa11.82□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 MYH14Q7Z406 1995 aaKnown RBP11.81□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 ADCY9O60503 1353 aa11.81□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 COL15A1P39059 1388 aa11.81□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 PRAMEF22A3QJZ6 481 aa11.81□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 E9PSI1 815 aa11.81□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 EIF2S2P20042 333 aaKnown RBP11.81□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 DNAJC5GQ8N7S2 189 aa11.81□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 HDGFL1Q5TGJ6 251 aa11.8□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 AMIGO3Q86WK7 504 aa11.8□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 GYS1P13807 737 aa11.79□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 DDX21Q9NR30 783 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 ZNF652Q9Y2D9 606 aa11.79□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 ERVV-1B6SEH8 477 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 KIF3CO14782 793 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 TWISTNBQ3B726 338 aaPredicted RBP11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 NBPF10Q6P3W6 841 aaKnown RBP11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 KIF6Q6ZMV9 814 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 NBPF15Q8N660 670 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 TSR2Q969E8 191 aaKnown RBP11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 FANCIQ9NVI1 1328 aa11.78□□□□□ -0.52
TRAM2-AS1-202ENST00000605910 MYL6BP14649 208 aa11.77□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 SLFN5Q08AF3 891 aa11.77□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 KRT24Q2M2I5 525 aa11.77□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 SMIM5Q71RC9 77 aa11.77□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 C8orf58Q8NAV2 365 aa11.77□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 PDIA6Q15084 440 aa11.76□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 TBC1D2BQ9UPU7 963 aa11.76□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 C4AP0C0L4 1744 aa11.76□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 VAMP4O75379 141 aa11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 CT47B1P0C2W7 299 aaPredicted RBP11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 TM4SF1P30408 202 aa11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 APLP1P51693 650 aa11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 EXOSC9Q06265 439 aaKnown RBP11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 MSL1Q68DK7 614 aa11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 TMEM92Q6UXU6 159 aa11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 TRMT2AQ8IZ69 625 aaKnown RBP11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 ZNF526Q8TF50 670 aaPredicted RBP11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 SRP68Q9UHB9 627 aaKnown RBP11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 MAP3K15Q6ZN16 1313 aa11.75□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 CAMTA2O94983 1202 aa11.74□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 MMP10P09238 476 aa11.74□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 PIP4K2AP48426 406 aaPredicted RBP11.74□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 ZBED9Q6R2W3 1325 aa11.73□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 LRP10Q7Z4F1 713 aa11.73□□□□□ -0.53
TRAM2-AS1-202ENST00000605910 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms