RNA–Protein interactions for RNA: ENST00000601054.1

SIPA1L3-210, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-210ENST00000601054 RBM17Q96I25 401 aaKnown RBP22.57■■□□□ 1.2
SIPA1L3-210ENST00000601054 CHL1O00533 1208 aa22.56■■□□□ 1.2
SIPA1L3-210ENST00000601054 OLFM4Q6UX06 510 aa22.56■■□□□ 1.2
SIPA1L3-210ENST00000601054 SNED1Q8TER0 1413 aa22.56■■□□□ 1.2
SIPA1L3-210ENST00000601054 FZD9O00144 591 aa22.55■■□□□ 1.2
SIPA1L3-210ENST00000601054 WDR43Q15061 677 aaKnown RBP eCLIP22.55■■□□□ 1.2
SIPA1L3-210ENST00000601054 HSP90AB3PQ58FF7 597 aa22.55■■□□□ 1.2
SIPA1L3-210ENST00000601054 SLC10A5Q5PT55 438 aa22.55■■□□□ 1.2
SIPA1L3-210ENST00000601054 LDHDQ86WU2 507 aa22.55■■□□□ 1.2
SIPA1L3-210ENST00000601054 JDP2Q8WYK2 163 aa22.55■■□□□ 1.2
SIPA1L3-210ENST00000601054 TAF1DQ9H5J8 278 aaPredicted RBP22.55■■□□□ 1.2
SIPA1L3-210ENST00000601054 NUP98P52948 1817 aa22.54■■□□□ 1.2
SIPA1L3-210ENST00000601054 NLRP3Q96P20 1036 aa22.54■■□□□ 1.2
SIPA1L3-210ENST00000601054 UTP14AQ9BVJ6 771 aaKnown RBP22.54■■□□□ 1.2
SIPA1L3-210ENST00000601054 CACNA1SQ13698 1873 aa22.54■■□□□ 1.2
SIPA1L3-210ENST00000601054 DDX21Q9NR30 783 aaKnown RBP eCLIP22.53■■□□□ 1.2
SIPA1L3-210ENST00000601054 CREBZFQ9NS37 354 aa22.53■■□□□ 1.2
SIPA1L3-210ENST00000601054 HACL1Q9UJ83 578 aa22.53■■□□□ 1.2
SIPA1L3-210ENST00000601054 HOXB7P09629 217 aa22.52■■□□□ 1.2
SIPA1L3-210ENST00000601054 NEUROD2Q15784 382 aa22.52■■□□□ 1.2
SIPA1L3-210ENST00000601054 PROSER3Q2NL68 480 aa22.52■■□□□ 1.2
SIPA1L3-210ENST00000601054 GPC2Q8N158 579 aa22.52■■□□□ 1.2
SIPA1L3-210ENST00000601054 ZNF541Q9H0D2 1346 aa22.52■■□□□ 1.2
SIPA1L3-210ENST00000601054 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
SIPA1L3-210ENST00000601054 COPS6Q7L5N1 327 aa22.51■■□□□ 1.19
SIPA1L3-210ENST00000601054 PNMA8AQ86V59 439 aaPredicted RBP22.51■■□□□ 1.19
SIPA1L3-210ENST00000601054 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
SIPA1L3-210ENST00000601054 TMX4Q9H1E5 349 aaPredicted RBP22.51■■□□□ 1.19
SIPA1L3-210ENST00000601054 TRIM35Q9UPQ4 493 aa22.51■■□□□ 1.19
SIPA1L3-210ENST00000601054 POTEIP0CG38 1075 aa22.5■■□□□ 1.19
SIPA1L3-210ENST00000601054 POTEJP0CG39 1038 aa22.5■■□□□ 1.19
SIPA1L3-210ENST00000601054 VPS33BQ9H267 617 aa22.5■■□□□ 1.19
SIPA1L3-210ENST00000601054 ADAMTS8Q9UP79 889 aa22.5■■□□□ 1.19
SIPA1L3-210ENST00000601054 SCN4AP35499 1836 aa22.5■■□□□ 1.19
SIPA1L3-210ENST00000601054 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
SIPA1L3-210ENST00000601054 ANXA1P04083 346 aa22.48■■□□□ 1.19
SIPA1L3-210ENST00000601054 EPHX2P34913 555 aa22.48■■□□□ 1.19
SIPA1L3-210ENST00000601054 EIF6P56537 245 aaKnown RBP22.48■■□□□ 1.19
SIPA1L3-210ENST00000601054 TCIRG1Q13488 830 aa22.48■■□□□ 1.19
SIPA1L3-210ENST00000601054 NLRP10Q86W26 655 aa22.48■■□□□ 1.19
SIPA1L3-210ENST00000601054 ATP6V0A2Q9Y487 856 aa22.48■■□□□ 1.19
SIPA1L3-210ENST00000601054 PASKQ96RG2 1323 aa22.48■■□□□ 1.19
SIPA1L3-210ENST00000601054 BBOX1O75936 387 aa22.47■■□□□ 1.19
SIPA1L3-210ENST00000601054 AIMP1Q12904 312 aaKnown RBP22.47■■□□□ 1.19
SIPA1L3-210ENST00000601054 C3orf67Q6ZVT6 689 aa22.47■■□□□ 1.19
SIPA1L3-210ENST00000601054 CFAP44Q96MT7 982 aa22.47■■□□□ 1.19
SIPA1L3-210ENST00000601054 LARGE2Q8N3Y3 721 aa22.46■■□□□ 1.19
SIPA1L3-210ENST00000601054 NECTIN2Q92692 538 aa22.46■■□□□ 1.19
SIPA1L3-210ENST00000601054 PRKRIP1Q9H875 184 aaPredicted RBP22.46■■□□□ 1.19
SIPA1L3-210ENST00000601054 DBF4Q9UBU7 674 aaPredicted RBP22.46■■□□□ 1.19
SIPA1L3-210ENST00000601054 LAS1LQ9Y4W2 734 aaKnown RBP22.46■■□□□ 1.19
SIPA1L3-210ENST00000601054 EAPPQ56P03 285 aaPredicted RBP22.45■■□□□ 1.18
SIPA1L3-210ENST00000601054 HDGFL1Q5TGJ6 251 aa22.45■■□□□ 1.18
SIPA1L3-210ENST00000601054 SH3TC1Q8TE82 1336 aa22.45■■□□□ 1.18
SIPA1L3-210ENST00000601054 ITGBL1O95965 494 aaPredicted RBP22.44■■□□□ 1.18
SIPA1L3-210ENST00000601054 KRT24Q2M2I5 525 aa22.44■■□□□ 1.18
SIPA1L3-210ENST00000601054 SUPT20HQ8NEM7 779 aa22.44■■□□□ 1.18
SIPA1L3-210ENST00000601054 PLBD2Q8NHP8 589 aa22.44■■□□□ 1.18
SIPA1L3-210ENST00000601054 CHPF2Q9P2E5 772 aa22.44■■□□□ 1.18
SIPA1L3-210ENST00000601054 TRMT112Q9UI30 125 aaKnown RBP22.44■■□□□ 1.18
SIPA1L3-210ENST00000601054 ABCC4O15439 1325 aa22.43■■□□□ 1.18
SIPA1L3-210ENST00000601054 SP8Q8IXZ3 490 aa22.43■■□□□ 1.18
SIPA1L3-210ENST00000601054 NIM1KQ8IY84 436 aa22.43■■□□□ 1.18
SIPA1L3-210ENST00000601054 RTFDC1Q9BY42 306 aaPredicted RBP22.43■■□□□ 1.18
SIPA1L3-210ENST00000601054 CLEC11AQ9Y240 323 aa22.43■■□□□ 1.18
SIPA1L3-210ENST00000601054 LMOD1P29536 600 aaPredicted RBP22.42■■□□□ 1.18
SIPA1L3-210ENST00000601054 CALD1Q05682 793 aaKnown RBP22.42■■□□□ 1.18
SIPA1L3-210ENST00000601054 ANKRD13DQ6ZTN6 518 aa22.42■■□□□ 1.18
SIPA1L3-210ENST00000601054 TMC4Q7Z404 712 aa22.42■■□□□ 1.18
SIPA1L3-210ENST00000601054 HYPKQ9NX55 129 aa22.42■■□□□ 1.18
SIPA1L3-210ENST00000601054 TMEM88BA6NKF7 163 aa22.41■■□□□ 1.18
SIPA1L3-210ENST00000601054 TCERG1O14776 1098 aaKnown RBP22.41■■□□□ 1.18
SIPA1L3-210ENST00000601054 DDX46Q7L014 1031 aaKnown RBP22.41■■□□□ 1.18
SIPA1L3-210ENST00000601054 GJA3Q9Y6H8 435 aa22.41■■□□□ 1.18
SIPA1L3-210ENST00000601054 PCNTO95613 3336 aa22.41■■□□□ 1.18
SIPA1L3-210ENST00000601054 PPIP5K2O43314 1243 aa22.4■■□□□ 1.18
SIPA1L3-210ENST00000601054 HSPA1AP0DMV8 641 aaKnown RBP22.4■■□□□ 1.18
SIPA1L3-210ENST00000601054 HSPA1BP0DMV9 641 aaKnown RBP22.4■■□□□ 1.18
SIPA1L3-210ENST00000601054 HCLS1P14317 486 aaPredicted RBP22.4■■□□□ 1.18
SIPA1L3-210ENST00000601054 CNTROBQ8N137 903 aa22.4■■□□□ 1.18
SIPA1L3-210ENST00000601054 COL4A5P29400 1685 aa22.39■■□□□ 1.18
SIPA1L3-210ENST00000601054 CNTNAP1P78357 1384 aa22.39■■□□□ 1.18
SIPA1L3-210ENST00000601054 ZNF853P0CG23 659 aa22.39■■□□□ 1.17
SIPA1L3-210ENST00000601054 GRAPQ13588 217 aa22.39■■□□□ 1.17
SIPA1L3-210ENST00000601054 COL13A1Q5TAT6 717 aaPredicted RBP22.39■■□□□ 1.17
SIPA1L3-210ENST00000601054 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.17
SIPA1L3-210ENST00000601054 GRAPLQ8TC17 118 aaPredicted RBP22.39■■□□□ 1.17
SIPA1L3-210ENST00000601054 MKRN1Q9UHC7 482 aaKnown RBP22.39■■□□□ 1.17
SIPA1L3-210ENST00000601054 ADAMTSL1Q8N6G6 1762 aa22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 TRIM28Q13263 835 aaKnown RBP22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 DPP8Q6V1X1 898 aaPredicted RBP22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 MPNDQ8N594 471 aa22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 ISCA1Q9BUE6 129 aa22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 CHMP4AQ9BY43 222 aa22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 MBIPQ9NS73 344 aa22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 IFT57Q9NWB7 429 aa22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 ZNRF3Q9ULT6 936 aa22.38■■□□□ 1.17
SIPA1L3-210ENST00000601054 SCNN1DP51172 638 aa22.37■■□□□ 1.17
SIPA1L3-210ENST00000601054 GNAI1P63096 354 aa22.37■■□□□ 1.17
SIPA1L3-210ENST00000601054 AOC3Q16853 763 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms