RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 RIPK4P57078 832 aa24.77■■□□□ 1.56
FARP1-229ENST00000600190 ZNF34Q8IZ26 560 aa24.77■■□□□ 1.56
FARP1-229ENST00000600190 PSMD1Q99460 953 aa24.77■■□□□ 1.56
FARP1-229ENST00000600190 EIF2S2P20042 333 aaKnown RBP24.76■■□□□ 1.55
FARP1-229ENST00000600190 EPHX2P34913 555 aa24.76■■□□□ 1.55
FARP1-229ENST00000600190 CC2D2BQ6DHV5 1058 aa24.76■■□□□ 1.55
FARP1-229ENST00000600190 RNF123Q5XPI4 1314 aa24.76■■□□□ 1.55
FARP1-229ENST00000600190 PASKQ96RG2 1323 aa24.76■■□□□ 1.55
FARP1-229ENST00000600190 TCERG1O14776 1098 aaKnown RBP24.75■■□□□ 1.55
FARP1-229ENST00000600190 CAPN15O75808 1086 aa24.75■■□□□ 1.55
FARP1-229ENST00000600190 HOXA10P31260 410 aaPredicted RBP24.75■■□□□ 1.55
FARP1-229ENST00000600190 GIGYF2Q6Y7W6 1299 aaKnown RBP24.75■■□□□ 1.55
FARP1-229ENST00000600190 RBM17Q96I25 401 aaKnown RBP24.75■■□□□ 1.55
FARP1-229ENST00000600190 ERBB4Q15303 1308 aa24.75■■□□□ 1.55
FARP1-229ENST00000600190 PPP1R42Q7Z4L9 355 aa24.74■■□□□ 1.55
FARP1-229ENST00000600190 GPC2Q8N158 579 aa24.74■■□□□ 1.55
FARP1-229ENST00000600190 IBTKQ9P2D0 1353 aaPredicted RBP24.74■■□□□ 1.55
FARP1-229ENST00000600190 NTSR2O95665 410 aa24.73■■□□□ 1.55
FARP1-229ENST00000600190 ITGBL1O95965 494 aaPredicted RBP24.73■■□□□ 1.55
FARP1-229ENST00000600190 PNMA8AQ86V59 439 aaPredicted RBP24.73■■□□□ 1.55
FARP1-229ENST00000600190 GJA3Q9Y6H8 435 aa24.73■■□□□ 1.55
FARP1-229ENST00000600190 RIC1Q4ADV7 1423 aa24.72■■□□□ 1.55
FARP1-229ENST00000600190 SNED1Q8TER0 1413 aa24.72■■□□□ 1.55
FARP1-229ENST00000600190 PPEF1O14829 653 aaPredicted RBP24.72■■□□□ 1.55
FARP1-229ENST00000600190 EIF6P56537 245 aaKnown RBP24.72■■□□□ 1.55
FARP1-229ENST00000600190 C3orf67Q6ZVT6 689 aa24.72■■□□□ 1.55
FARP1-229ENST00000600190 CRAMP1Q96RY5 1269 aa24.72■■□□□ 1.55
FARP1-229ENST00000600190 TMEM88BA6NKF7 163 aa24.71■■□□□ 1.55
FARP1-229ENST00000600190 ANXA1P04083 346 aa24.71■■□□□ 1.55
FARP1-229ENST00000600190 PDIA6Q15084 440 aa24.71■■□□□ 1.55
FARP1-229ENST00000600190 GRIPAP1Q4V328 841 aa24.71■■□□□ 1.55
FARP1-229ENST00000600190 PARP10Q53GL7 1025 aa24.71■■□□□ 1.55
FARP1-229ENST00000600190 NLRP3Q96P20 1036 aa24.71■■□□□ 1.55
FARP1-229ENST00000600190 CNTNAP1P78357 1384 aa24.7■■□□□ 1.55
FARP1-229ENST00000600190 PROSER3Q2NL68 480 aa24.7■■□□□ 1.54
FARP1-229ENST00000600190 MAP1SQ66K74 1059 aaPredicted RBP24.7■■□□□ 1.54
FARP1-229ENST00000600190 LRP10Q7Z4F1 713 aa24.7■■□□□ 1.54
FARP1-229ENST00000600190 SLC51AQ86UW1 340 aa24.7■■□□□ 1.54
FARP1-229ENST00000600190 LARGE2Q8N3Y3 721 aa24.7■■□□□ 1.54
FARP1-229ENST00000600190 TMPOP42166 694 aaKnown RBP24.69■■□□□ 1.54
FARP1-229ENST00000600190 CNTROBQ8N137 903 aa24.69■■□□□ 1.54
FARP1-229ENST00000600190 NECTIN2Q92692 538 aa24.69■■□□□ 1.54
FARP1-229ENST00000600190 UTP14AQ9BVJ6 771 aaKnown RBP24.69■■□□□ 1.54
FARP1-229ENST00000600190 LMOD3Q0VAK6 560 aa24.68■■□□□ 1.54
FARP1-229ENST00000600190 TMX4Q9H1E5 349 aaPredicted RBP24.68■■□□□ 1.54
FARP1-229ENST00000600190 BABAM1Q9NWV8 329 aa24.68■■□□□ 1.54
FARP1-229ENST00000600190 COL4A5P29400 1685 aa24.68■■□□□ 1.54
FARP1-229ENST00000600190 ANP32CO43423 234 aa24.67■■□□□ 1.54
FARP1-229ENST00000600190 LMOD1P29536 600 aaPredicted RBP24.67■■□□□ 1.54
FARP1-229ENST00000600190 AIMP1Q12904 312 aaKnown RBP24.67■■□□□ 1.54
FARP1-229ENST00000600190 NEUROD2Q15784 382 aa24.67■■□□□ 1.54
FARP1-229ENST00000600190 ADAMTSL1Q8N6G6 1762 aa24.67■■□□□ 1.54
FARP1-229ENST00000600190 VEGFBP49765 207 aa24.66■■□□□ 1.54
FARP1-229ENST00000600190 COPS6Q7L5N1 327 aa24.66■■□□□ 1.54
FARP1-229ENST00000600190 MYBBP1AQ9BQG0 1328 aaKnown RBP24.65■■□□□ 1.54
FARP1-229ENST00000600190 SLC10A5Q5PT55 438 aa24.65■■□□□ 1.54
FARP1-229ENST00000600190 CCDC146Q8IYE0 955 aa24.65■■□□□ 1.54
FARP1-229ENST00000600190 NIM1KQ8IY84 436 aa24.64■■□□□ 1.54
FARP1-229ENST00000600190 XAGE3Q8WTP9 111 aa24.64■■□□□ 1.54
FARP1-229ENST00000600190 PRKRIP1Q9H875 184 aaPredicted RBP24.64■■□□□ 1.54
FARP1-229ENST00000600190 ATP6V0A2Q9Y487 856 aa24.64■■□□□ 1.54
FARP1-229ENST00000600190 PPIP5K2O43314 1243 aa24.63■■□□□ 1.53
FARP1-229ENST00000600190 EPS15P42566 896 aa24.63■■□□□ 1.53
FARP1-229ENST00000600190 HSP90AB3PQ58FF7 597 aa24.63■■□□□ 1.53
FARP1-229ENST00000600190 LAS1LQ9Y4W2 734 aaKnown RBP24.63■■□□□ 1.53
FARP1-229ENST00000600190 ABCC4O15439 1325 aa24.62■■□□□ 1.53
FARP1-229ENST00000600190 FOXN1O15353 648 aa24.62■■□□□ 1.53
FARP1-229ENST00000600190 SCNN1DP51172 638 aa24.62■■□□□ 1.53
FARP1-229ENST00000600190 AOC3Q16853 763 aa24.62■■□□□ 1.53
FARP1-229ENST00000600190 HCLS1P14317 486 aaPredicted RBP24.61■■□□□ 1.53
FARP1-229ENST00000600190 KRT24Q2M2I5 525 aa24.61■■□□□ 1.53
FARP1-229ENST00000600190 NLRP10Q86W26 655 aa24.61■■□□□ 1.53
FARP1-229ENST00000600190 TRMT112Q9UI30 125 aaKnown RBP24.61■■□□□ 1.53
FARP1-229ENST00000600190 LTBP1Q14766 1721 aa24.61■■□□□ 1.53
FARP1-229ENST00000600190 DEFB115Q30KQ5 88 aa24.6■■□□□ 1.53
FARP1-229ENST00000600190 AIDAQ96BJ3 306 aa24.6■■□□□ 1.53
FARP1-229ENST00000600190 ABT1Q9ULW3 272 aaKnown RBP24.6■■□□□ 1.53
FARP1-229ENST00000600190 BBOX1O75936 387 aa24.59■■□□□ 1.53
FARP1-229ENST00000600190 TCIRG1Q13488 830 aa24.59■■□□□ 1.53
FARP1-229ENST00000600190 SUPT20HQ8NEM7 779 aa24.59■■□□□ 1.53
FARP1-229ENST00000600190 ZNF428Q96B54 188 aa24.59■■□□□ 1.53
FARP1-229ENST00000600190 DDX21Q9NR30 783 aaKnown RBP eCLIP24.59■■□□□ 1.53
FARP1-229ENST00000600190 ANKRD36CQ5JPF3 1778 aa24.58■■□□□ 1.53
FARP1-229ENST00000600190 RASSF10A6NK89 507 aa24.58■■□□□ 1.53
FARP1-229ENST00000600190 CHL1O00533 1208 aa24.58■■□□□ 1.53
FARP1-229ENST00000600190 DPP8Q6V1X1 898 aaPredicted RBP24.58■■□□□ 1.53
FARP1-229ENST00000600190 USP50Q70EL3 339 aaPredicted RBP24.58■■□□□ 1.53
FARP1-229ENST00000600190 VPS33BQ9H267 617 aa24.58■■□□□ 1.53
FARP1-229ENST00000600190 WDR43Q15061 677 aaKnown RBP eCLIP24.57■■□□□ 1.52
FARP1-229ENST00000600190 DDX46Q7L014 1031 aaKnown RBP24.57■■□□□ 1.52
FARP1-229ENST00000600190 SP8Q8IXZ3 490 aa24.57■■□□□ 1.52
FARP1-229ENST00000600190 RUNDC1Q96C34 613 aa24.57■■□□□ 1.52
FARP1-229ENST00000600190 CHPF2Q9P2E5 772 aa24.57■■□□□ 1.52
FARP1-229ENST00000600190 FMR1Q06787 632 aaKnown RBP eCLIP24.56■■□□□ 1.52
FARP1-229ENST00000600190 MPNDQ8N594 471 aa24.56■■□□□ 1.52
FARP1-229ENST00000600190 ZNRF3Q9ULT6 936 aa24.56■■□□□ 1.52
FARP1-229ENST00000600190 TRIM35Q9UPQ4 493 aa24.56■■□□□ 1.52
FARP1-229ENST00000600190 LAMB2P55268 1798 aa24.56■■□□□ 1.52
FARP1-229ENST00000600190 SH3TC1Q8TE82 1336 aa24.56■■□□□ 1.52
FARP1-229ENST00000600190 CTCFP49711 727 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms