RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 CHRNA2Q15822 529 aa18.44■□□□□ 0.54
TRPM4-209ENST00000598502 BEND3Q5T5X7 828 aa18.44■□□□□ 0.54
TRPM4-209ENST00000598502 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
TRPM4-209ENST00000598502 ATP6V1DQ9Y5K8 247 aa18.44■□□□□ 0.54
TRPM4-209ENST00000598502 GTF2F1P35269 517 aaKnown RBP eCLIP18.43■□□□□ 0.543e-7■■■■■ 33
TRPM4-209ENST00000598502 UBE2HP62256 183 aa18.43■□□□□ 0.54
TRPM4-209ENST00000598502 NCBP1Q09161 790 aaKnown RBP18.43■□□□□ 0.54
TRPM4-209ENST00000598502 ARHGEF25Q86VW2 580 aa18.43■□□□□ 0.54
TRPM4-209ENST00000598502 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
TRPM4-209ENST00000598502 TPM3P06753 285 aa18.43■□□□□ 0.54
TRPM4-209ENST00000598502 CPA1P15085 419 aa18.43■□□□□ 0.54
TRPM4-209ENST00000598502 NRBP1Q9UHY1 535 aa18.43■□□□□ 0.54
TRPM4-209ENST00000598502 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
TRPM4-209ENST00000598502 KIF1BPQ96EK5 621 aa18.42■□□□□ 0.54
TRPM4-209ENST00000598502 KCNF1Q9H3M0 494 aa18.42■□□□□ 0.54
TRPM4-209ENST00000598502 CCDC83Q8IWF9 413 aa18.42■□□□□ 0.54
TRPM4-209ENST00000598502 STX6O43752 255 aa18.42■□□□□ 0.54
TRPM4-209ENST00000598502 CCDC9Q9Y3X0 531 aaKnown RBP18.42■□□□□ 0.54
TRPM4-209ENST00000598502 FILIP1Q7Z7B0 1213 aa18.41■□□□□ 0.54
TRPM4-209ENST00000598502 TIGD1Q96MW7 591 aa18.41■□□□□ 0.54
TRPM4-209ENST00000598502 AMOTQ4VCS5 1084 aa18.41■□□□□ 0.54
TRPM4-209ENST00000598502 ZSCAN22P10073 491 aaPredicted RBP18.41■□□□□ 0.54
TRPM4-209ENST00000598502 FAM173BQ6P4H8 233 aa18.41■□□□□ 0.54
TRPM4-209ENST00000598502 RIC3Q7Z5B4 369 aa18.41■□□□□ 0.54
TRPM4-209ENST00000598502 NWD1Q149M9 1564 aa18.4■□□□□ 0.54
TRPM4-209ENST00000598502 GORABQ5T7V8 394 aa18.4■□□□□ 0.54
TRPM4-209ENST00000598502 CERS3Q8IU89 383 aa18.4■□□□□ 0.54
TRPM4-209ENST00000598502 SPTLC3Q9NUV7 552 aa18.4■□□□□ 0.54
TRPM4-209ENST00000598502 SALL3Q9BXA9 1300 aa18.4■□□□□ 0.54
TRPM4-209ENST00000598502 KRT222Q8N1A0 295 aa18.4■□□□□ 0.54
TRPM4-209ENST00000598502 CLASRPQ8N2M8 674 aaKnown RBP18.4■□□□□ 0.54
TRPM4-209ENST00000598502 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
TRPM4-209ENST00000598502 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.54
TRPM4-209ENST00000598502 IFIT2P09913 472 aaKnown RBP18.39■□□□□ 0.54
TRPM4-209ENST00000598502 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
TRPM4-209ENST00000598502 ZBTB9Q96C00 473 aa18.39■□□□□ 0.53
TRPM4-209ENST00000598502 SYT1P21579 422 aa18.39■□□□□ 0.53
TRPM4-209ENST00000598502 TFIP11Q9UBB9 837 aaKnown RBP18.39■□□□□ 0.53
TRPM4-209ENST00000598502 AP5Z1O43299 807 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 CCDC8Q9H0W5 538 aaPredicted RBP18.38■□□□□ 0.53
TRPM4-209ENST00000598502 CEMIPQ8WUJ3 1361 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 GOLGA6L19H0YKK7 550 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 CNTROBQ8N137 903 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 NFATC2IPQ8NCF5 419 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 NUP62CLQ9H1M0 184 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 TNMDQ9H2S6 317 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 AACSQ86V21 672 aa18.38■□□□□ 0.53
TRPM4-209ENST00000598502 SYTL4Q96C24 671 aaPredicted RBP18.38■□□□□ 0.53
TRPM4-209ENST00000598502 MAP3K11Q16584 847 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 STAP2Q9UGK3 403 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
TRPM4-209ENST00000598502 ATF3P18847 181 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 CEP135Q66GS9 1140 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 TRIM34Q9BYJ4 488 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 TAOK2Q9UL54 1235 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.37■□□□□ 0.53
TRPM4-209ENST00000598502 POLR3GO15318 223 aaPredicted RBP18.37■□□□□ 0.53
TRPM4-209ENST00000598502 PDIA4P13667 645 aaKnown RBP18.37■□□□□ 0.53
TRPM4-209ENST00000598502 ST7Q9NRC1 585 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 CLIP2Q9UDT6 1046 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 ADCY9O60503 1353 aa18.37■□□□□ 0.53
TRPM4-209ENST00000598502 SMTNL1A8MU46 457 aa18.36■□□□□ 0.53
TRPM4-209ENST00000598502 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
TRPM4-209ENST00000598502 ADGRL3Q9HAR2 1447 aa18.36■□□□□ 0.53
TRPM4-209ENST00000598502 IRX5P78411 483 aaPredicted RBP18.36■□□□□ 0.53
TRPM4-209ENST00000598502 ANO6Q4KMQ2 910 aa18.36■□□□□ 0.53
TRPM4-209ENST00000598502 KSR2Q6VAB6 950 aa18.36■□□□□ 0.53
TRPM4-209ENST00000598502 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
TRPM4-209ENST00000598502 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
TRPM4-209ENST00000598502 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
TRPM4-209ENST00000598502 PXDNQ92626 1479 aa18.36■□□□□ 0.53
TRPM4-209ENST00000598502 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
TRPM4-209ENST00000598502 ANKRD7Q92527 254 aa18.36■□□□□ 0.53
TRPM4-209ENST00000598502 GABPB1Q06547 395 aaPredicted RBP18.35■□□□□ 0.53
TRPM4-209ENST00000598502 POLA2Q14181 598 aa18.35■□□□□ 0.53
TRPM4-209ENST00000598502 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
TRPM4-209ENST00000598502 F13A1P00488 732 aa18.35■□□□□ 0.53
TRPM4-209ENST00000598502 FOSBP53539 338 aa18.35■□□□□ 0.53
TRPM4-209ENST00000598502 PTPN14Q15678 1187 aa18.35■□□□□ 0.53
TRPM4-209ENST00000598502 SUCLG2Q96I99 432 aa18.35■□□□□ 0.53
TRPM4-209ENST00000598502 BECN2A8MW95 431 aa18.34■□□□□ 0.53
TRPM4-209ENST00000598502 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
TRPM4-209ENST00000598502 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRPM4-209ENST00000598502 ELF2Q15723 593 aa18.34■□□□□ 0.53
TRPM4-209ENST00000598502 HSP90AB4PQ58FF6 505 aa18.34■□□□□ 0.53
TRPM4-209ENST00000598502 NECAB1Q8N987 351 aa18.34■□□□□ 0.53
TRPM4-209ENST00000598502 ZNF215Q9UL58 517 aaPredicted RBP18.34■□□□□ 0.53
TRPM4-209ENST00000598502 GJB2P29033 226 aa18.34■□□□□ 0.53
TRPM4-209ENST00000598502 FAM200AQ8TCP9 573 aa18.34■□□□□ 0.53
TRPM4-209ENST00000598502 BICC1Q9H694 974 aaKnown RBP18.34■□□□□ 0.53
TRPM4-209ENST00000598502 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
TRPM4-209ENST00000598502 CUL4AQ13619 759 aa18.34■□□□□ 0.53
TRPM4-209ENST00000598502 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.53
TRPM4-209ENST00000598502 TYRO3Q06418 890 aa18.33■□□□□ 0.53
TRPM4-209ENST00000598502 XAGE3Q8WTP9 111 aa18.33■□□□□ 0.53
TRPM4-209ENST00000598502 MYD88Q99836 296 aa18.33■□□□□ 0.53
TRPM4-209ENST00000598502 LTN1O94822 1766 aa18.33■□□□□ 0.52
TRPM4-209ENST00000598502 AK2P54819 239 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms