RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 CC2D2BQ6DHV5 1058 aa20.95■□□□□ 0.94
LINC02560-201ENST00000596379 CLEC11AQ9Y240 323 aa20.95■□□□□ 0.94
LINC02560-201ENST00000596379 PASKQ96RG2 1323 aa20.95■□□□□ 0.94
LINC02560-201ENST00000596379 IBTKQ9P2D0 1353 aaPredicted RBP20.95■□□□□ 0.94
LINC02560-201ENST00000596379 SNED1Q8TER0 1413 aa20.95■□□□□ 0.94
LINC02560-201ENST00000596379 NTSR2O95665 410 aa20.94■□□□□ 0.94
LINC02560-201ENST00000596379 EPHX2P34913 555 aa20.94■□□□□ 0.94
LINC02560-201ENST00000596379 PDIA6Q15084 440 aa20.94■□□□□ 0.94
LINC02560-201ENST00000596379 RALBP1Q15311 655 aa20.94■□□□□ 0.94
LINC02560-201ENST00000596379 JDP2Q8WYK2 163 aa20.94■□□□□ 0.94
LINC02560-201ENST00000596379 RBM17Q96I25 401 aaKnown RBP20.94■□□□□ 0.94
LINC02560-201ENST00000596379 TCERG1O14776 1098 aaKnown RBP20.93■□□□□ 0.94
LINC02560-201ENST00000596379 ITGBL1O95965 494 aaPredicted RBP20.93■□□□□ 0.94
LINC02560-201ENST00000596379 LRP10Q7Z4F1 713 aa20.93■□□□□ 0.94
LINC02560-201ENST00000596379 PPP1R42Q7Z4L9 355 aa20.93■□□□□ 0.94
LINC02560-201ENST00000596379 CRAMP1Q96RY5 1269 aa20.93■□□□□ 0.94
LINC02560-201ENST00000596379 RNF123Q5XPI4 1314 aa20.93■□□□□ 0.94
LINC02560-201ENST00000596379 RIC1Q4ADV7 1423 aa20.93■□□□□ 0.94
LINC02560-201ENST00000596379 ANXA1P04083 346 aa20.92■□□□□ 0.94
LINC02560-201ENST00000596379 TMPOP42166 694 aaKnown RBP20.92■□□□□ 0.94
LINC02560-201ENST00000596379 PROSER3Q2NL68 480 aa20.92■□□□□ 0.94
LINC02560-201ENST00000596379 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
LINC02560-201ENST00000596379 TNS4Q8IZW8 715 aa20.92■□□□□ 0.94
LINC02560-201ENST00000596379 GPC2Q8N158 579 aa20.92■□□□□ 0.94
LINC02560-201ENST00000596379 PPEF1O14829 653 aaPredicted RBP20.91■□□□□ 0.94
LINC02560-201ENST00000596379 GRIPAP1Q4V328 841 aa20.91■□□□□ 0.94
LINC02560-201ENST00000596379 PARP10Q53GL7 1025 aa20.91■□□□□ 0.94
LINC02560-201ENST00000596379 SLC51AQ86UW1 340 aa20.91■□□□□ 0.94
LINC02560-201ENST00000596379 BABAM1Q9NWV8 329 aa20.91■□□□□ 0.94
LINC02560-201ENST00000596379 EIF6P56537 245 aaKnown RBP20.9■□□□□ 0.94
LINC02560-201ENST00000596379 PNMA8AQ86V59 439 aaPredicted RBP20.9■□□□□ 0.94
LINC02560-201ENST00000596379 NLRP3Q96P20 1036 aa20.9■□□□□ 0.94
LINC02560-201ENST00000596379 UTP14AQ9BVJ6 771 aaKnown RBP20.9■□□□□ 0.94
LINC02560-201ENST00000596379 GJA3Q9Y6H8 435 aa20.9■□□□□ 0.94
LINC02560-201ENST00000596379 TMEM88BA6NKF7 163 aa20.89■□□□□ 0.93
LINC02560-201ENST00000596379 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
LINC02560-201ENST00000596379 SLC10A5Q5PT55 438 aa20.89■□□□□ 0.93
LINC02560-201ENST00000596379 LARGE2Q8N3Y3 721 aa20.89■□□□□ 0.93
LINC02560-201ENST00000596379 NECTIN2Q92692 538 aa20.89■□□□□ 0.93
LINC02560-201ENST00000596379 COL4A5P29400 1685 aa20.89■□□□□ 0.93
LINC02560-201ENST00000596379 CNTNAP1P78357 1384 aa20.88■□□□□ 0.93
LINC02560-201ENST00000596379 ADAMTSL1Q8N6G6 1762 aa20.88■□□□□ 0.93
LINC02560-201ENST00000596379 CAPN15O75808 1086 aa20.88■□□□□ 0.93
LINC02560-201ENST00000596379 NEUROD2Q15784 382 aa20.88■□□□□ 0.93
LINC02560-201ENST00000596379 MAP1SQ66K74 1059 aaPredicted RBP20.88■□□□□ 0.93
LINC02560-201ENST00000596379 COPS6Q7L5N1 327 aa20.88■□□□□ 0.93
LINC02560-201ENST00000596379 CNTROBQ8N137 903 aa20.88■□□□□ 0.93
LINC02560-201ENST00000596379 AIMP1Q12904 312 aaKnown RBP20.87■□□□□ 0.93
LINC02560-201ENST00000596379 CCDC146Q8IYE0 955 aa20.87■□□□□ 0.93
LINC02560-201ENST00000596379 DDX10Q13206 875 aaKnown RBP20.86■□□□□ 0.93
LINC02560-201ENST00000596379 XAGE3Q8WTP9 111 aa20.86■□□□□ 0.93
LINC02560-201ENST00000596379 LMOD1P29536 600 aaPredicted RBP20.85■□□□□ 0.93
LINC02560-201ENST00000596379 VEGFBP49765 207 aa20.85■□□□□ 0.93
LINC02560-201ENST00000596379 TMX4Q9H1E5 349 aaPredicted RBP20.85■□□□□ 0.93
LINC02560-201ENST00000596379 ATP6V0A2Q9Y487 856 aa20.85■□□□□ 0.93
LINC02560-201ENST00000596379 CHL1O00533 1208 aa20.84■□□□□ 0.93
LINC02560-201ENST00000596379 KRT24Q2M2I5 525 aa20.84■□□□□ 0.93
LINC02560-201ENST00000596379 HSP90AB3PQ58FF7 597 aa20.84■□□□□ 0.93
LINC02560-201ENST00000596379 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
LINC02560-201ENST00000596379 NIM1KQ8IY84 436 aa20.84■□□□□ 0.93
LINC02560-201ENST00000596379 LAS1LQ9Y4W2 734 aaKnown RBP20.84■□□□□ 0.93
LINC02560-201ENST00000596379 ABCC4O15439 1325 aa20.83■□□□□ 0.93
LINC02560-201ENST00000596379 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.93
LINC02560-201ENST00000596379 PPIP5K2O43314 1243 aa20.83■□□□□ 0.93
LINC02560-201ENST00000596379 HCLS1P14317 486 aaPredicted RBP20.83■□□□□ 0.93
LINC02560-201ENST00000596379 EPS15P42566 896 aa20.83■□□□□ 0.93
LINC02560-201ENST00000596379 SCNN1DP51172 638 aa20.83■□□□□ 0.93
LINC02560-201ENST00000596379 TCIRG1Q13488 830 aa20.83■□□□□ 0.93
LINC02560-201ENST00000596379 DDX21Q9NR30 783 aaKnown RBP eCLIP20.83■□□□□ 0.93
LINC02560-201ENST00000596379 LTBP1Q14766 1721 aa20.83■□□□□ 0.92
LINC02560-201ENST00000596379 ANKRD36CQ5JPF3 1778 aa20.82■□□□□ 0.92
LINC02560-201ENST00000596379 AOC3Q16853 763 aa20.82■□□□□ 0.92
LINC02560-201ENST00000596379 RUNDC1Q96C34 613 aa20.82■□□□□ 0.92
LINC02560-201ENST00000596379 TRMT112Q9UI30 125 aaKnown RBP20.82■□□□□ 0.92
LINC02560-201ENST00000596379 TRIM35Q9UPQ4 493 aa20.82■□□□□ 0.92
LINC02560-201ENST00000596379 BBOX1O75936 387 aa20.81■□□□□ 0.92
LINC02560-201ENST00000596379 SP8Q8IXZ3 490 aa20.81■□□□□ 0.92
LINC02560-201ENST00000596379 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
LINC02560-201ENST00000596379 LAMB2P55268 1798 aa20.81■□□□□ 0.92
LINC02560-201ENST00000596379 FOXN1O15353 648 aa20.8■□□□□ 0.92
LINC02560-201ENST00000596379 DEFB115Q30KQ5 88 aa20.8■□□□□ 0.92
LINC02560-201ENST00000596379 ZNF428Q96B54 188 aa20.8■□□□□ 0.92
LINC02560-201ENST00000596379 RASSF10A6NK89 507 aa20.79■□□□□ 0.92
LINC02560-201ENST00000596379 WDR43Q15061 677 aaKnown RBP eCLIP20.79■□□□□ 0.92
LINC02560-201ENST00000596379 DDX46Q7L014 1031 aaKnown RBP20.79■□□□□ 0.92
LINC02560-201ENST00000596379 SUPT20HQ8NEM7 779 aa20.79■□□□□ 0.92
LINC02560-201ENST00000596379 RTFDC1Q9BY42 306 aaPredicted RBP20.79■□□□□ 0.92
LINC02560-201ENST00000596379 CHPF2Q9P2E5 772 aa20.79■□□□□ 0.92
LINC02560-201ENST00000596379 ADAMTS8Q9UP79 889 aa20.79■□□□□ 0.92
LINC02560-201ENST00000596379 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
LINC02560-201ENST00000596379 TAF1P21675 1872 aa20.78■□□□□ 0.92
LINC02560-201ENST00000596379 CXCL9Q07325 125 aa20.78■□□□□ 0.92
LINC02560-201ENST00000596379 DPP8Q6V1X1 898 aaPredicted RBP20.78■□□□□ 0.92
LINC02560-201ENST00000596379 USP50Q70EL3 339 aaPredicted RBP20.78■□□□□ 0.92
LINC02560-201ENST00000596379 MPNDQ8N594 471 aa20.78■□□□□ 0.92
LINC02560-201ENST00000596379 ZNRF3Q9ULT6 936 aa20.78■□□□□ 0.92
LINC02560-201ENST00000596379 FMR1Q06787 632 aaKnown RBP eCLIP20.77■□□□□ 0.92
LINC02560-201ENST00000596379 HDGFL1Q5TGJ6 251 aa20.77■□□□□ 0.92
LINC02560-201ENST00000596379 AIDAQ96BJ3 306 aa20.77■□□□□ 0.92
LINC02560-201ENST00000596379 ABT1Q9ULW3 272 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms