RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 GJB2P29033 226 aa18.37■□□□□ 0.53
ZNF541-205ENST00000595558 JAKMIP1Q96N16 626 aaKnown RBP18.37■□□□□ 0.53
ZNF541-205ENST00000595558 ADAMTSL3P82987 1691 aa18.37■□□□□ 0.53
ZNF541-205ENST00000595558 PHKG2P15735 406 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 NECAB1Q8N987 351 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 TSC1Q92574 1164 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 KIAA2012Q0VF49 1180 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
ZNF541-205ENST00000595558 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 AP5Z1O43299 807 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
ZNF541-205ENST00000595558 PLCB2Q00722 1185 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 MYD88Q99836 296 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 SLC52A2Q9HAB3 445 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 DIAPH3Q9NSV4 1193 aa18.36■□□□□ 0.53
ZNF541-205ENST00000595558 MEGF6O75095 1541 aa18.35■□□□□ 0.53
ZNF541-205ENST00000595558 UBE2HP62256 183 aa18.35■□□□□ 0.53
ZNF541-205ENST00000595558 MTMR6Q9Y217 621 aa18.35■□□□□ 0.53
ZNF541-205ENST00000595558 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
ZNF541-205ENST00000595558 KDM6AO15550 1401 aaPredicted RBP18.35■□□□□ 0.53
ZNF541-205ENST00000595558 MED1Q15648 1581 aaPredicted RBP18.35■□□□□ 0.53
ZNF541-205ENST00000595558 PDRG1Q9NUG6 133 aa18.35■□□□□ 0.53
ZNF541-205ENST00000595558 SASH1O94885 1247 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 ME3Q16798 604 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 SASS6Q6UVJ0 657 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 AACSQ86V21 672 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 GRM8O00222 908 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 HOXB7P09629 217 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 TATP17735 454 aaPredicted RBP18.34■□□□□ 0.53
ZNF541-205ENST00000595558 FAM173BQ6P4H8 233 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 EAF2Q96CJ1 260 aaPredicted RBP18.34■□□□□ 0.53
ZNF541-205ENST00000595558 FAM227BQ96M60 508 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 TCEANC2Q96MN5 208 aa18.34■□□□□ 0.53
ZNF541-205ENST00000595558 GLRX3O76003 335 aaKnown RBP18.33■□□□□ 0.53
ZNF541-205ENST00000595558 DDX21Q9NR30 783 aaKnown RBP eCLIP18.33■□□□□ 0.53
ZNF541-205ENST00000595558 CHMP3Q9Y3E7 222 aa18.33■□□□□ 0.53
ZNF541-205ENST00000595558 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.52
ZNF541-205ENST00000595558 DNTTIP2Q5QJE6 756 aaKnown RBP18.33■□□□□ 0.52
ZNF541-205ENST00000595558 FUCA2Q9BTY2 467 aa18.32■□□□□ 0.52
ZNF541-205ENST00000595558 TAF6LQ9Y6J9 622 aa18.32■□□□□ 0.52
ZNF541-205ENST00000595558 HEG1Q9ULI3 1381 aa18.32■□□□□ 0.52
ZNF541-205ENST00000595558 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
ZNF541-205ENST00000595558 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
ZNF541-205ENST00000595558 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
ZNF541-205ENST00000595558 CLASRPQ8N2M8 674 aaKnown RBP18.32■□□□□ 0.52
ZNF541-205ENST00000595558 FAM184AQ8NB25 1140 aa18.32■□□□□ 0.52
ZNF541-205ENST00000595558 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
ZNF541-205ENST00000595558 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
ZNF541-205ENST00000595558 FAM177BA6PVY3 158 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 UVSSAQ2YD98 709 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 ZSWIM6Q9HCJ5 1215 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 TPCN1Q9ULQ1 816 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 MST1RQ04912 1400 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 SLIT3O75094 1523 aa18.31■□□□□ 0.52
ZNF541-205ENST00000595558 KDM4AO75164 1064 aa18.3■□□□□ 0.52
ZNF541-205ENST00000595558 NOLC1Q14978 699 aaKnown RBP eCLIP18.3■□□□□ 0.52
ZNF541-205ENST00000595558 NECTIN1Q15223 517 aa18.3■□□□□ 0.52
ZNF541-205ENST00000595558 LINS1Q8NG48 757 aa18.3■□□□□ 0.52
ZNF541-205ENST00000595558 DYNC1I1O14576 645 aa18.3■□□□□ 0.52
ZNF541-205ENST00000595558 IFIT2P09913 472 aaKnown RBP18.3■□□□□ 0.52
ZNF541-205ENST00000595558 VPS53Q5VIR6 699 aa18.3■□□□□ 0.52
ZNF541-205ENST00000595558 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
ZNF541-205ENST00000595558 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
ZNF541-205ENST00000595558 UBE3BQ7Z3V4 1068 aa18.29■□□□□ 0.52
ZNF541-205ENST00000595558 STRN4Q9NRL3 753 aa18.29■□□□□ 0.52
ZNF541-205ENST00000595558 RBM8AQ9Y5S9 174 aaKnown RBP18.29■□□□□ 0.52
ZNF541-205ENST00000595558 NEURL1BA8MQ27 555 aa18.29■□□□□ 0.52
ZNF541-205ENST00000595558 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
ZNF541-205ENST00000595558 IFNL2Q8IZJ0 200 aa18.29■□□□□ 0.52
ZNF541-205ENST00000595558 PKNOX2Q96KN3 472 aa18.29■□□□□ 0.52
ZNF541-205ENST00000595558 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
ZNF541-205ENST00000595558 NMIQ13287 307 aaPredicted RBP18.28■□□□□ 0.52
ZNF541-205ENST00000595558 MTX1Q13505 466 aa18.28■□□□□ 0.52
ZNF541-205ENST00000595558 SLFNL1Q499Z3 407 aa18.28■□□□□ 0.52
ZNF541-205ENST00000595558 CRYBG1Q9Y4K1 1723 aa18.28■□□□□ 0.52
ZNF541-205ENST00000595558 CCDC171Q6TFL3 1326 aa18.28■□□□□ 0.52
ZNF541-205ENST00000595558 CAMK4Q16566 473 aa18.28■□□□□ 0.52
ZNF541-205ENST00000595558 CREB3L3Q68CJ9 461 aa18.28■□□□□ 0.52
ZNF541-205ENST00000595558 CDC37L1Q7L3B6 337 aa18.28■□□□□ 0.52
ZNF541-205ENST00000595558 TTC5Q8N0Z6 440 aa18.28■□□□□ 0.52
ZNF541-205ENST00000595558 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.52
ZNF541-205ENST00000595558 CABP4P57796 275 aa18.27■□□□□ 0.52
ZNF541-205ENST00000595558 GCKRQ14397 625 aa18.27■□□□□ 0.52
ZNF541-205ENST00000595558 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
ZNF541-205ENST00000595558 SPC24Q8NBT2 197 aa18.27■□□□□ 0.52
ZNF541-205ENST00000595558 LMO7Q8WWI1 1683 aa18.27■□□□□ 0.52
ZNF541-205ENST00000595558 A1BGP04217 495 aa18.27■□□□□ 0.51
ZNF541-205ENST00000595558 TTC6Q86TZ1 520 aa18.27■□□□□ 0.51
ZNF541-205ENST00000595558 RUFY2Q8WXA3 655 aa18.27■□□□□ 0.51
ZNF541-205ENST00000595558 ATP6V1DQ9Y5K8 247 aa18.27■□□□□ 0.51
ZNF541-205ENST00000595558 A0A0D9SFI3 127 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
ZNF541-205ENST00000595558 KCNJ4P48050 445 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 TOM1L2Q6ZVM7 507 aa18.26■□□□□ 0.51
ZNF541-205ENST00000595558 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms