RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 RIC1Q4ADV7 1423 aa21.97■■□□□ 1.11
LTBP4-209ENST00000594116 MYL6BP14649 208 aa21.96■■□□□ 1.11
LTBP4-209ENST00000594116 CCDC93Q567U6 631 aa21.96■■□□□ 1.11
LTBP4-209ENST00000594116 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
LTBP4-209ENST00000594116 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
LTBP4-209ENST00000594116 FANCIQ9NVI1 1328 aa21.96■■□□□ 1.11
LTBP4-209ENST00000594116 GTF2E1P29083 439 aaPredicted RBP21.95■■□□□ 1.1
LTBP4-209ENST00000594116 ABCC12Q96J65 1359 aa21.95■■□□□ 1.1
LTBP4-209ENST00000594116 POTECB2RU33 542 aa21.94■■□□□ 1.1
LTBP4-209ENST00000594116 CRY2Q49AN0 593 aa21.94■■□□□ 1.1
LTBP4-209ENST00000594116 ALDH1B1P30837 517 aa21.93■■□□□ 1.1
LTBP4-209ENST00000594116 DUSP27Q5VZP5 1158 aa21.93■■□□□ 1.1
LTBP4-209ENST00000594116 UBN2Q6ZU65 1347 aa21.93■■□□□ 1.1
LTBP4-209ENST00000594116 LRP10Q7Z4F1 713 aa21.93■■□□□ 1.1
LTBP4-209ENST00000594116 TSR2Q969E8 191 aaKnown RBP21.93■■□□□ 1.1
LTBP4-209ENST00000594116 ZBTB3Q9H5J0 574 aa21.93■■□□□ 1.1
LTBP4-209ENST00000594116 FKBP4Q02790 459 aaKnown RBP eCLIP21.92■■□□□ 1.1
LTBP4-209ENST00000594116 GIGYF2Q6Y7W6 1299 aaKnown RBP21.92■■□□□ 1.1
LTBP4-209ENST00000594116 PDIA6Q15084 440 aa21.91■■□□□ 1.1
LTBP4-209ENST00000594116 NUTM1Q86Y26 1132 aa21.91■■□□□ 1.1
LTBP4-209ENST00000594116 ZNF34Q8IZ26 560 aa21.91■■□□□ 1.1
LTBP4-209ENST00000594116 RTKN2Q8IZC4 609 aa21.91■■□□□ 1.1
LTBP4-209ENST00000594116 SNED1Q8TER0 1413 aa21.9■■□□□ 1.1
LTBP4-209ENST00000594116 ANKRD36CQ5JPF3 1778 aa21.9■■□□□ 1.1
LTBP4-209ENST00000594116 GPTP24298 496 aa21.9■■□□□ 1.1
LTBP4-209ENST00000594116 SCN4AP35499 1836 aa21.9■■□□□ 1.1
LTBP4-209ENST00000594116 HTRA3P83110 453 aa21.89■■□□□ 1.09
LTBP4-209ENST00000594116 SUSD4Q5VX71 490 aa21.89■■□□□ 1.09
LTBP4-209ENST00000594116 KLRG1Q96E93 195 aa21.89■■□□□ 1.09
LTBP4-209ENST00000594116 DDNO94850 711 aaPredicted RBP21.88■■□□□ 1.09
LTBP4-209ENST00000594116 NTSR2O95665 410 aa21.88■■□□□ 1.09
LTBP4-209ENST00000594116 EIF2S2P20042 333 aaKnown RBP21.88■■□□□ 1.09
LTBP4-209ENST00000594116 PARP10Q53GL7 1025 aa21.88■■□□□ 1.09
LTBP4-209ENST00000594116 OLFM4Q6UX06 510 aa21.88■■□□□ 1.09
LTBP4-209ENST00000594116 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
LTBP4-209ENST00000594116 ZNF277Q9NRM2 450 aaPredicted RBP21.87■■□□□ 1.09
LTBP4-209ENST00000594116 PROSER3Q2NL68 480 aa21.86■■□□□ 1.09
LTBP4-209ENST00000594116 PPP1R42Q7Z4L9 355 aa21.86■■□□□ 1.09
LTBP4-209ENST00000594116 RPGRQ92834 1020 aaKnown RBP21.86■■□□□ 1.09
LTBP4-209ENST00000594116 L3MBTL3Q96JM7 780 aaPredicted RBP21.86■■□□□ 1.09
LTBP4-209ENST00000594116 EXOSC9Q06265 439 aaKnown RBP21.85■■□□□ 1.09
LTBP4-209ENST00000594116 KRT24Q2M2I5 525 aa21.85■■□□□ 1.09
LTBP4-209ENST00000594116 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
LTBP4-209ENST00000594116 JMYQ8N9B5 988 aa21.85■■□□□ 1.09
LTBP4-209ENST00000594116 PSMD1Q99460 953 aa21.85■■□□□ 1.09
LTBP4-209ENST00000594116 RNF123Q5XPI4 1314 aa21.84■■□□□ 1.09
LTBP4-209ENST00000594116 PCNTO95613 3336 aa21.84■■□□□ 1.09
LTBP4-209ENST00000594116 IQCA1LA6NCM1 817 aa21.84■■□□□ 1.09
LTBP4-209ENST00000594116 ANXA1P04083 346 aa21.84■■□□□ 1.09
LTBP4-209ENST00000594116 HOXB7P09629 217 aa21.84■■□□□ 1.09
LTBP4-209ENST00000594116 IARSP41252 1262 aaKnown RBP21.84■■□□□ 1.09
LTBP4-209ENST00000594116 IFFO2Q5TF58 517 aa21.84■■□□□ 1.09
LTBP4-209ENST00000594116 C8orf58Q8NAV2 365 aa21.84■■□□□ 1.09
LTBP4-209ENST00000594116 GRIPAP1Q4V328 841 aa21.83■■□□□ 1.09
LTBP4-209ENST00000594116 SYNE4Q8N205 404 aa21.83■■□□□ 1.09
LTBP4-209ENST00000594116 TSPYL6Q8N831 410 aa21.83■■□□□ 1.09
LTBP4-209ENST00000594116 CRAMP1Q96RY5 1269 aa21.83■■□□□ 1.09
LTBP4-209ENST00000594116 ZNF541Q9H0D2 1346 aa21.82■■□□□ 1.08
LTBP4-209ENST00000594116 HSP90AB3PQ58FF7 597 aa21.82■■□□□ 1.08
LTBP4-209ENST00000594116 CHADLQ6NUI6 762 aa21.82■■□□□ 1.08
LTBP4-209ENST00000594116 RBM17Q96I25 401 aaKnown RBP21.82■■□□□ 1.08
LTBP4-209ENST00000594116 DDX21Q9NR30 783 aaKnown RBP eCLIP21.82■■□□□ 1.08
LTBP4-209ENST00000594116 LAMB2P55268 1798 aa21.82■■□□□ 1.08
LTBP4-209ENST00000594116 FZD9O00144 591 aa21.81■■□□□ 1.08
LTBP4-209ENST00000594116 TWISTNBQ3B726 338 aaPredicted RBP21.81■■□□□ 1.08
LTBP4-209ENST00000594116 SLC10A5Q5PT55 438 aa21.81■■□□□ 1.08
LTBP4-209ENST00000594116 COPS6Q7L5N1 327 aa21.81■■□□□ 1.08
LTBP4-209ENST00000594116 NECTIN2Q92692 538 aa21.81■■□□□ 1.08
LTBP4-209ENST00000594116 UTP14AQ9BVJ6 771 aaKnown RBP21.81■■□□□ 1.08
LTBP4-209ENST00000594116 CT47B1P0C2W7 299 aaPredicted RBP21.8■■□□□ 1.08
LTBP4-209ENST00000594116 C3orf67Q6ZVT6 689 aa21.8■■□□□ 1.08
LTBP4-209ENST00000594116 XAGE3Q8WTP9 111 aa21.8■■□□□ 1.08
LTBP4-209ENST00000594116 NLRP3Q96P20 1036 aa21.8■■□□□ 1.08
LTBP4-209ENST00000594116 PPEF1O14829 653 aaPredicted RBP21.79■■□□□ 1.08
LTBP4-209ENST00000594116 VAMP4O75379 141 aa21.79■■□□□ 1.08
LTBP4-209ENST00000594116 POTEIP0CG38 1075 aa21.79■■□□□ 1.08
LTBP4-209ENST00000594116 POTEJP0CG39 1038 aa21.79■■□□□ 1.08
LTBP4-209ENST00000594116 TAF1DQ9H5J8 278 aaPredicted RBP21.79■■□□□ 1.08
LTBP4-209ENST00000594116 ADAMTSL1Q8N6G6 1762 aa21.79■■□□□ 1.08
LTBP4-209ENST00000594116 COL4A5P29400 1685 aa21.79■■□□□ 1.08
LTBP4-209ENST00000594116 AIMP1Q12904 312 aaKnown RBP21.78■■□□□ 1.08
LTBP4-209ENST00000594116 NLRP10Q86W26 655 aa21.78■■□□□ 1.08
LTBP4-209ENST00000594116 LDHDQ86WU2 507 aa21.78■■□□□ 1.08
LTBP4-209ENST00000594116 JDP2Q8WYK2 163 aa21.78■■□□□ 1.08
LTBP4-209ENST00000594116 CACNA1FO60840 1977 aa21.78■■□□□ 1.08
LTBP4-209ENST00000594116 ELL2O00472 640 aaPredicted RBP21.77■■□□□ 1.08
LTBP4-209ENST00000594116 TCIRG1Q13488 830 aa21.77■■□□□ 1.08
LTBP4-209ENST00000594116 HDGFL1Q5TGJ6 251 aa21.77■■□□□ 1.08
LTBP4-209ENST00000594116 GPC2Q8N158 579 aa21.77■■□□□ 1.08
LTBP4-209ENST00000594116 CHPF2Q9P2E5 772 aa21.77■■□□□ 1.08
LTBP4-209ENST00000594116 ZNF428Q96B54 188 aa21.76■■□□□ 1.07
LTBP4-209ENST00000594116 HACL1Q9UJ83 578 aa21.76■■□□□ 1.07
LTBP4-209ENST00000594116 DBF4Q9UBU7 674 aaPredicted RBP21.75■■□□□ 1.07
LTBP4-209ENST00000594116 ABCC4O15439 1325 aa21.75■■□□□ 1.07
LTBP4-209ENST00000594116 PLBD2Q8NHP8 589 aa21.74■■□□□ 1.07
LTBP4-209ENST00000594116 CREBZFQ9NS37 354 aa21.74■■□□□ 1.07
LTBP4-209ENST00000594116 ATP6V0A2Q9Y487 856 aa21.74■■□□□ 1.07
LTBP4-209ENST00000594116 DDX60Q8IY21 1712 aaKnown RBP21.74■■□□□ 1.07
LTBP4-209ENST00000594116 SH3TC1Q8TE82 1336 aa21.74■■□□□ 1.07
LTBP4-209ENST00000594116 EPHX2P34913 555 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms