RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 POTEJP0CG39 1038 aa21.16■□□□□ 0.98
TNFAIP1-206ENST00000583213 IARSP41252 1262 aaKnown RBP21.16■□□□□ 0.98
TNFAIP1-206ENST00000583213 PARP10Q53GL7 1025 aa21.16■□□□□ 0.98
TNFAIP1-206ENST00000583213 COL4A5P29400 1685 aa21.15■□□□□ 0.98
TNFAIP1-206ENST00000583213 GPTP24298 496 aa21.15■□□□□ 0.98
TNFAIP1-206ENST00000583213 GRIPAP1Q4V328 841 aa21.15■□□□□ 0.98
TNFAIP1-206ENST00000583213 LDHDQ86WU2 507 aa21.15■□□□□ 0.98
TNFAIP1-206ENST00000583213 SYNE4Q8N205 404 aa21.15■□□□□ 0.98
TNFAIP1-206ENST00000583213 CRAMP1Q96RY5 1269 aa21.15■□□□□ 0.98
TNFAIP1-206ENST00000583213 RNF123Q5XPI4 1314 aa21.14■□□□□ 0.97
TNFAIP1-206ENST00000583213 PASKQ96RG2 1323 aa21.14■□□□□ 0.97
TNFAIP1-206ENST00000583213 CREBZFQ9NS37 354 aa21.14■□□□□ 0.97
TNFAIP1-206ENST00000583213 PROSER3Q2NL68 480 aa21.13■□□□□ 0.97
TNFAIP1-206ENST00000583213 SLC10A5Q5PT55 438 aa21.13■□□□□ 0.97
TNFAIP1-206ENST00000583213 CHL1O00533 1208 aa21.12■□□□□ 0.97
TNFAIP1-206ENST00000583213 C3orf67Q6ZVT6 689 aa21.12■□□□□ 0.97
TNFAIP1-206ENST00000583213 PPP1R42Q7Z4L9 355 aa21.12■□□□□ 0.97
TNFAIP1-206ENST00000583213 RPGRQ92834 1020 aaKnown RBP21.12■□□□□ 0.97
TNFAIP1-206ENST00000583213 GPC2Q8N158 579 aa21.11■□□□□ 0.97
TNFAIP1-206ENST00000583213 LAMB2P55268 1798 aa21.1■□□□□ 0.97
TNFAIP1-206ENST00000583213 RBM17Q96I25 401 aaKnown RBP21.1■□□□□ 0.97
TNFAIP1-206ENST00000583213 HACL1Q9UJ83 578 aa21.1■□□□□ 0.97
TNFAIP1-206ENST00000583213 TRIM35Q9UPQ4 493 aa21.1■□□□□ 0.97
TNFAIP1-206ENST00000583213 ITGBL1O95965 494 aaPredicted RBP21.09■□□□□ 0.97
TNFAIP1-206ENST00000583213 EIF2S2P20042 333 aaKnown RBP21.09■□□□□ 0.97
TNFAIP1-206ENST00000583213 UTP14AQ9BVJ6 771 aaKnown RBP21.09■□□□□ 0.97
TNFAIP1-206ENST00000583213 PPEF1O14829 653 aaPredicted RBP21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 ANXA1P04083 346 aa21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 EPHX2P34913 555 aa21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 DDX10Q13206 875 aaKnown RBP21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 LTBP1Q14766 1721 aa21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 COL13A1Q5TAT6 717 aaPredicted RBP21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 JDP2Q8WYK2 163 aa21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 RUNDC1Q96C34 613 aa21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 DDX21Q9NR30 783 aaKnown RBP eCLIP21.08■□□□□ 0.97
TNFAIP1-206ENST00000583213 HOXB7P09629 217 aa21.07■□□□□ 0.96
TNFAIP1-206ENST00000583213 SLC51AQ86UW1 340 aa21.07■□□□□ 0.96
TNFAIP1-206ENST00000583213 PNMA8AQ86V59 439 aaPredicted RBP21.07■□□□□ 0.96
TNFAIP1-206ENST00000583213 NLRP3Q96P20 1036 aa21.07■□□□□ 0.96
TNFAIP1-206ENST00000583213 COPS6Q7L5N1 327 aa21.06■□□□□ 0.96
TNFAIP1-206ENST00000583213 NLRP10Q86W26 655 aa21.06■□□□□ 0.96
TNFAIP1-206ENST00000583213 ATP6V0A2Q9Y487 856 aa21.06■□□□□ 0.96
TNFAIP1-206ENST00000583213 CNTNAP1P78357 1384 aa21.06■□□□□ 0.96
TNFAIP1-206ENST00000583213 HSPA1AP0DMV8 641 aaKnown RBP21.05■□□□□ 0.96
TNFAIP1-206ENST00000583213 HSPA1BP0DMV9 641 aaKnown RBP21.05■□□□□ 0.96
TNFAIP1-206ENST00000583213 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
TNFAIP1-206ENST00000583213 CCDC146Q8IYE0 955 aa21.05■□□□□ 0.96
TNFAIP1-206ENST00000583213 XAGE3Q8WTP9 111 aa21.05■□□□□ 0.96
TNFAIP1-206ENST00000583213 RTFDC1Q9BY42 306 aaPredicted RBP21.05■□□□□ 0.96
TNFAIP1-206ENST00000583213 VPS33BQ9H267 617 aa21.05■□□□□ 0.96
TNFAIP1-206ENST00000583213 ABCC4O15439 1325 aa21.04■□□□□ 0.96
TNFAIP1-206ENST00000583213 TCIRG1Q13488 830 aa21.04■□□□□ 0.96
TNFAIP1-206ENST00000583213 LRRC37AA6NMS7 1700 aa21.04■□□□□ 0.96
TNFAIP1-206ENST00000583213 EIF6P56537 245 aaKnown RBP21.03■□□□□ 0.96
TNFAIP1-206ENST00000583213 LARGE2Q8N3Y3 721 aa21.03■□□□□ 0.96
TNFAIP1-206ENST00000583213 ADAMTS8Q9UP79 889 aa21.03■□□□□ 0.96
TNFAIP1-206ENST00000583213 DDX60Q8IY21 1712 aaKnown RBP21.02■□□□□ 0.96
TNFAIP1-206ENST00000583213 SCNN1DP51172 638 aa21.02■□□□□ 0.96
TNFAIP1-206ENST00000583213 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.96
TNFAIP1-206ENST00000583213 EAPPQ56P03 285 aaPredicted RBP21.02■□□□□ 0.96
TNFAIP1-206ENST00000583213 CHPF2Q9P2E5 772 aa21.02■□□□□ 0.96
TNFAIP1-206ENST00000583213 SH3TC1Q8TE82 1336 aa21.02■□□□□ 0.95
TNFAIP1-206ENST00000583213 TMEM88BA6NKF7 163 aa21.01■□□□□ 0.95
TNFAIP1-206ENST00000583213 BBOX1O75936 387 aa21.01■□□□□ 0.95
TNFAIP1-206ENST00000583213 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
TNFAIP1-206ENST00000583213 CFAP44Q96MT7 982 aa21.01■□□□□ 0.95
TNFAIP1-206ENST00000583213 MKRN1Q9UHC7 482 aaKnown RBP21.01■□□□□ 0.95
TNFAIP1-206ENST00000583213 AIMP1Q12904 312 aaKnown RBP21■□□□□ 0.95
TNFAIP1-206ENST00000583213 SP8Q8IXZ3 490 aa21■□□□□ 0.95
TNFAIP1-206ENST00000583213 PLBD2Q8NHP8 589 aa21■□□□□ 0.95
TNFAIP1-206ENST00000583213 NECTIN2Q92692 538 aa21■□□□□ 0.95
TNFAIP1-206ENST00000583213 PRKRIP1Q9H875 184 aaPredicted RBP21■□□□□ 0.95
TNFAIP1-206ENST00000583213 DUOX1Q9NRD9 1551 aa21■□□□□ 0.95
TNFAIP1-206ENST00000583213 ZNF853P0CG23 659 aa20.99■□□□□ 0.95
TNFAIP1-206ENST00000583213 HDGFL1Q5TGJ6 251 aa20.99■□□□□ 0.95
TNFAIP1-206ENST00000583213 NIM1KQ8IY84 436 aa20.99■□□□□ 0.95
TNFAIP1-206ENST00000583213 CNTROBQ8N137 903 aa20.99■□□□□ 0.95
TNFAIP1-206ENST00000583213 ISCA1Q9BUE6 129 aa20.99■□□□□ 0.95
TNFAIP1-206ENST00000583213 DBF4Q9UBU7 674 aaPredicted RBP20.99■□□□□ 0.95
TNFAIP1-206ENST00000583213 PPIP5K2O43314 1243 aa20.98■□□□□ 0.95
TNFAIP1-206ENST00000583213 HCLS1P14317 486 aaPredicted RBP20.98■□□□□ 0.95
TNFAIP1-206ENST00000583213 MAP1SQ66K74 1059 aaPredicted RBP20.98■□□□□ 0.95
TNFAIP1-206ENST00000583213 SUPT20HQ8NEM7 779 aa20.98■□□□□ 0.95
TNFAIP1-206ENST00000583213 TRMT112Q9UI30 125 aaKnown RBP20.98■□□□□ 0.95
TNFAIP1-206ENST00000583213 RASSF10A6NK89 507 aa20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 TCERG1O14776 1098 aaKnown RBP20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 LMOD1P29536 600 aaPredicted RBP20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 GRAPQ13588 217 aa20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 AOC3Q16853 763 aa20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 TMC4Q7Z404 712 aa20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 GRAPLQ8TC17 118 aaPredicted RBP20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 TMX4Q9H1E5 349 aaPredicted RBP20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 CLEC11AQ9Y240 323 aa20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 GJA3Q9Y6H8 435 aa20.97■□□□□ 0.95
TNFAIP1-206ENST00000583213 TAF1P21675 1872 aa20.96■□□□□ 0.95
TNFAIP1-206ENST00000583213 EPS15P42566 896 aa20.96■□□□□ 0.95
TNFAIP1-206ENST00000583213 KIAA2012Q0VF49 1180 aa20.96■□□□□ 0.95
TNFAIP1-206ENST00000583213 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
TNFAIP1-206ENST00000583213 ANKRD13DQ6ZTN6 518 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms