RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 EIF2S2P20042 333 aaKnown RBP18.98■□□□□ 0.63
ITGB4-208ENST00000582629 GRIPAP1Q4V328 841 aa18.98■□□□□ 0.63
ITGB4-208ENST00000582629 LRP10Q7Z4F1 713 aa18.98■□□□□ 0.63
ITGB4-208ENST00000582629 PPP1R42Q7Z4L9 355 aa18.98■□□□□ 0.63
ITGB4-208ENST00000582629 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
ITGB4-208ENST00000582629 CREBZFQ9NS37 354 aa18.98■□□□□ 0.63
ITGB4-208ENST00000582629 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
ITGB4-208ENST00000582629 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
ITGB4-208ENST00000582629 FZD9O00144 591 aa18.97■□□□□ 0.63
ITGB4-208ENST00000582629 PDIA6Q15084 440 aa18.97■□□□□ 0.63
ITGB4-208ENST00000582629 CRAMP1Q96RY5 1269 aa18.97■□□□□ 0.63
ITGB4-208ENST00000582629 HACL1Q9UJ83 578 aa18.97■□□□□ 0.63
ITGB4-208ENST00000582629 PCNTO95613 3336 aa18.97■□□□□ 0.63
ITGB4-208ENST00000582629 JDP2Q8WYK2 163 aa18.96■□□□□ 0.63
ITGB4-208ENST00000582629 PPEF1O14829 653 aaPredicted RBP18.95■□□□□ 0.62
ITGB4-208ENST00000582629 DDX10Q13206 875 aaKnown RBP18.95■□□□□ 0.62
ITGB4-208ENST00000582629 PROSER3Q2NL68 480 aa18.95■□□□□ 0.62
ITGB4-208ENST00000582629 ADAMTSL1Q8N6G6 1762 aa18.95■□□□□ 0.62
ITGB4-208ENST00000582629 PASKQ96RG2 1323 aa18.95■□□□□ 0.62
ITGB4-208ENST00000582629 ANXA1P04083 346 aa18.94■□□□□ 0.62
ITGB4-208ENST00000582629 EPHX2P34913 555 aa18.94■□□□□ 0.62
ITGB4-208ENST00000582629 EAPPQ56P03 285 aaPredicted RBP18.94■□□□□ 0.62
ITGB4-208ENST00000582629 HSP90AB3PQ58FF7 597 aa18.94■□□□□ 0.62
ITGB4-208ENST00000582629 GPC2Q8N158 579 aa18.94■□□□□ 0.62
ITGB4-208ENST00000582629 NLRP3Q96P20 1036 aa18.94■□□□□ 0.62
ITGB4-208ENST00000582629 UTP14AQ9BVJ6 771 aaKnown RBP18.94■□□□□ 0.62
ITGB4-208ENST00000582629 RNF123Q5XPI4 1314 aa18.94■□□□□ 0.62
ITGB4-208ENST00000582629 HSPA1AP0DMV8 641 aaKnown RBP18.93■□□□□ 0.62
ITGB4-208ENST00000582629 HSPA1BP0DMV9 641 aaKnown RBP18.93■□□□□ 0.62
ITGB4-208ENST00000582629 EIF6P56537 245 aaKnown RBP18.93■□□□□ 0.62
ITGB4-208ENST00000582629 SLC10A5Q5PT55 438 aa18.93■□□□□ 0.62
ITGB4-208ENST00000582629 COL13A1Q5TAT6 717 aaPredicted RBP18.93■□□□□ 0.62
ITGB4-208ENST00000582629 C3orf67Q6ZVT6 689 aa18.93■□□□□ 0.62
ITGB4-208ENST00000582629 CCDC146Q8IYE0 955 aa18.93■□□□□ 0.62
ITGB4-208ENST00000582629 COL4A5P29400 1685 aa18.92■□□□□ 0.62
ITGB4-208ENST00000582629 WDR43Q15061 677 aaKnown RBP eCLIP18.92■□□□□ 0.62
ITGB4-208ENST00000582629 NEUROD2Q15784 382 aa18.92■□□□□ 0.62
ITGB4-208ENST00000582629 PNMA8AQ86V59 439 aaPredicted RBP18.92■□□□□ 0.62
ITGB4-208ENST00000582629 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
ITGB4-208ENST00000582629 TMX4Q9H1E5 349 aaPredicted RBP18.92■□□□□ 0.62
ITGB4-208ENST00000582629 LAMB2P55268 1798 aa18.91■□□□□ 0.62
ITGB4-208ENST00000582629 CHL1O00533 1208 aa18.91■□□□□ 0.62
ITGB4-208ENST00000582629 COPS6Q7L5N1 327 aa18.91■□□□□ 0.62
ITGB4-208ENST00000582629 LARGE2Q8N3Y3 721 aa18.91■□□□□ 0.62
ITGB4-208ENST00000582629 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
ITGB4-208ENST00000582629 NECTIN2Q92692 538 aa18.91■□□□□ 0.62
ITGB4-208ENST00000582629 DDX21Q9NR30 783 aaKnown RBP eCLIP18.91■□□□□ 0.62
ITGB4-208ENST00000582629 MKRN1Q9UHC7 482 aaKnown RBP18.91■□□□□ 0.62
ITGB4-208ENST00000582629 CLEC11AQ9Y240 323 aa18.91■□□□□ 0.62
ITGB4-208ENST00000582629 TCERG1O14776 1098 aaKnown RBP18.9■□□□□ 0.62
ITGB4-208ENST00000582629 ITGBL1O95965 494 aaPredicted RBP18.9■□□□□ 0.62
ITGB4-208ENST00000582629 AIMP1Q12904 312 aaKnown RBP18.9■□□□□ 0.62
ITGB4-208ENST00000582629 NLRP10Q86W26 655 aa18.89■□□□□ 0.61
ITGB4-208ENST00000582629 TRIM35Q9UPQ4 493 aa18.89■□□□□ 0.61
ITGB4-208ENST00000582629 ATP6V0A2Q9Y487 856 aa18.89■□□□□ 0.61
ITGB4-208ENST00000582629 GJA3Q9Y6H8 435 aa18.89■□□□□ 0.61
ITGB4-208ENST00000582629 ABCC4O15439 1325 aa18.89■□□□□ 0.61
ITGB4-208ENST00000582629 CNTNAP1P78357 1384 aa18.89■□□□□ 0.61
ITGB4-208ENST00000582629 LTBP1Q14766 1721 aa18.88■□□□□ 0.61
ITGB4-208ENST00000582629 TMEM88BA6NKF7 163 aa18.88■□□□□ 0.61
ITGB4-208ENST00000582629 LMOD1P29536 600 aaPredicted RBP18.88■□□□□ 0.61
ITGB4-208ENST00000582629 TCIRG1Q13488 830 aa18.88■□□□□ 0.61
ITGB4-208ENST00000582629 KRT24Q2M2I5 525 aa18.88■□□□□ 0.61
ITGB4-208ENST00000582629 SLC51AQ86UW1 340 aa18.88■□□□□ 0.61
ITGB4-208ENST00000582629 NIM1KQ8IY84 436 aa18.88■□□□□ 0.61
ITGB4-208ENST00000582629 VPS33BQ9H267 617 aa18.88■□□□□ 0.61
ITGB4-208ENST00000582629 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
ITGB4-208ENST00000582629 PPIP5K2O43314 1243 aa18.87■□□□□ 0.61
ITGB4-208ENST00000582629 HOXB7P09629 217 aa18.87■□□□□ 0.61
ITGB4-208ENST00000582629 CNTROBQ8N137 903 aa18.87■□□□□ 0.61
ITGB4-208ENST00000582629 HDGFL1Q5TGJ6 251 aa18.86■□□□□ 0.61
ITGB4-208ENST00000582629 TNS4Q8IZW8 715 aa18.86■□□□□ 0.61
ITGB4-208ENST00000582629 SUPT20HQ8NEM7 779 aa18.86■□□□□ 0.61
ITGB4-208ENST00000582629 CHPF2Q9P2E5 772 aa18.86■□□□□ 0.61
ITGB4-208ENST00000582629 TRMT112Q9UI30 125 aaKnown RBP18.86■□□□□ 0.61
ITGB4-208ENST00000582629 ADAMTS8Q9UP79 889 aa18.86■□□□□ 0.61
ITGB4-208ENST00000582629 SH3TC1Q8TE82 1336 aa18.85■□□□□ 0.61
ITGB4-208ENST00000582629 BBOX1O75936 387 aa18.85■□□□□ 0.61
ITGB4-208ENST00000582629 HCLS1P14317 486 aaPredicted RBP18.85■□□□□ 0.61
ITGB4-208ENST00000582629 SCNN1DP51172 638 aa18.85■□□□□ 0.61
ITGB4-208ENST00000582629 AOC3Q16853 763 aa18.85■□□□□ 0.61
ITGB4-208ENST00000582629 MAP1SQ66K74 1059 aaPredicted RBP18.85■□□□□ 0.61
ITGB4-208ENST00000582629 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
ITGB4-208ENST00000582629 RTFDC1Q9BY42 306 aaPredicted RBP18.85■□□□□ 0.61
ITGB4-208ENST00000582629 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
ITGB4-208ENST00000582629 PLBD2Q8NHP8 589 aa18.84■□□□□ 0.61
ITGB4-208ENST00000582629 DDX60Q8IY21 1712 aaKnown RBP18.83■□□□□ 0.61
ITGB4-208ENST00000582629 GRAPQ13588 217 aa18.83■□□□□ 0.6
ITGB4-208ENST00000582629 DPP8Q6V1X1 898 aaPredicted RBP18.83■□□□□ 0.6
ITGB4-208ENST00000582629 MPNDQ8N594 471 aa18.83■□□□□ 0.6
ITGB4-208ENST00000582629 GRAPLQ8TC17 118 aaPredicted RBP18.83■□□□□ 0.6
ITGB4-208ENST00000582629 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
ITGB4-208ENST00000582629 DBF4Q9UBU7 674 aaPredicted RBP18.83■□□□□ 0.6
ITGB4-208ENST00000582629 TAF1P21675 1872 aa18.82■□□□□ 0.6
ITGB4-208ENST00000582629 EPS15P42566 896 aa18.82■□□□□ 0.6
ITGB4-208ENST00000582629 USP50Q70EL3 339 aaPredicted RBP18.82■□□□□ 0.6
ITGB4-208ENST00000582629 PRKRIP1Q9H875 184 aaPredicted RBP18.82■□□□□ 0.6
ITGB4-208ENST00000582629 LRRC37AA6NMS7 1700 aa18.81■□□□□ 0.6
ITGB4-208ENST00000582629 RASSF10A6NK89 507 aa18.81■□□□□ 0.6
ITGB4-208ENST00000582629 VEGFBP49765 207 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms