RNA–Protein interactions for RNA: ENST00000582055.1

LIMD2-210, Transcript of LIM domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMD2, Length 509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-210ENST00000582055 GPC2Q8N158 579 aa16.5■□□□□ 0.23
LIMD2-210ENST00000582055 ABCC12Q96J65 1359 aa16.5■□□□□ 0.23
LIMD2-210ENST00000582055 ERBB4Q15303 1308 aa16.49■□□□□ 0.23
LIMD2-210ENST00000582055 UBN2Q6ZU65 1347 aa16.49■□□□□ 0.23
LIMD2-210ENST00000582055 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
LIMD2-210ENST00000582055 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
LIMD2-210ENST00000582055 GRIPAP1Q4V328 841 aa16.49■□□□□ 0.23
LIMD2-210ENST00000582055 GIGYF2Q6Y7W6 1299 aaKnown RBP16.49■□□□□ 0.23
LIMD2-210ENST00000582055 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
LIMD2-210ENST00000582055 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
LIMD2-210ENST00000582055 RNF123Q5XPI4 1314 aa16.48■□□□□ 0.23
LIMD2-210ENST00000582055 RIC1Q4ADV7 1423 aa16.48■□□□□ 0.23
LIMD2-210ENST00000582055 SNED1Q8TER0 1413 aa16.48■□□□□ 0.23
LIMD2-210ENST00000582055 TMEM88BA6NKF7 163 aa16.48■□□□□ 0.23
LIMD2-210ENST00000582055 PPP1R42Q7Z4L9 355 aa16.48■□□□□ 0.23
LIMD2-210ENST00000582055 CAPN15O75808 1086 aa16.47■□□□□ 0.23
LIMD2-210ENST00000582055 EIF6P56537 245 aaKnown RBP16.47■□□□□ 0.23
LIMD2-210ENST00000582055 CRAMP1Q96RY5 1269 aa16.47■□□□□ 0.23
LIMD2-210ENST00000582055 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
LIMD2-210ENST00000582055 CNTNAP1P78357 1384 aa16.47■□□□□ 0.23
LIMD2-210ENST00000582055 NTSR2O95665 410 aa16.46■□□□□ 0.23
LIMD2-210ENST00000582055 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
LIMD2-210ENST00000582055 RIPK4P57078 832 aa16.46■□□□□ 0.23
LIMD2-210ENST00000582055 PARP10Q53GL7 1025 aa16.46■□□□□ 0.23
LIMD2-210ENST00000582055 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
LIMD2-210ENST00000582055 NLRP3Q96P20 1036 aa16.46■□□□□ 0.23
LIMD2-210ENST00000582055 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
LIMD2-210ENST00000582055 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
LIMD2-210ENST00000582055 PDIA6Q15084 440 aa16.45■□□□□ 0.22
LIMD2-210ENST00000582055 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
LIMD2-210ENST00000582055 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
LIMD2-210ENST00000582055 GJA3Q9Y6H8 435 aa16.45■□□□□ 0.22
LIMD2-210ENST00000582055 LAMB2P55268 1798 aa16.44■□□□□ 0.22
LIMD2-210ENST00000582055 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
LIMD2-210ENST00000582055 MAP1SQ66K74 1059 aaPredicted RBP16.44■□□□□ 0.22
LIMD2-210ENST00000582055 LRP10Q7Z4F1 713 aa16.44■□□□□ 0.22
LIMD2-210ENST00000582055 TMX4Q9H1E5 349 aaPredicted RBP16.44■□□□□ 0.22
LIMD2-210ENST00000582055 TRPM7Q96QT4 1865 aa16.44■□□□□ 0.22
LIMD2-210ENST00000582055 COL4A5P29400 1685 aa16.43■□□□□ 0.22
LIMD2-210ENST00000582055 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
LIMD2-210ENST00000582055 VEGFBP49765 207 aa16.43■□□□□ 0.22
LIMD2-210ENST00000582055 RALBP1Q15311 655 aa16.43■□□□□ 0.22
LIMD2-210ENST00000582055 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
LIMD2-210ENST00000582055 C3orf67Q6ZVT6 689 aa16.43■□□□□ 0.22
LIMD2-210ENST00000582055 UTP14AQ9BVJ6 771 aaKnown RBP16.43■□□□□ 0.22
LIMD2-210ENST00000582055 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
LIMD2-210ENST00000582055 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
LIMD2-210ENST00000582055 DEFB115Q30KQ5 88 aa16.42■□□□□ 0.22
LIMD2-210ENST00000582055 VPS33BQ9H267 617 aa16.42■□□□□ 0.22
LIMD2-210ENST00000582055 LTBP1Q14766 1721 aa16.42■□□□□ 0.22
LIMD2-210ENST00000582055 FOXN1O15353 648 aa16.41■□□□□ 0.22
LIMD2-210ENST00000582055 ANXA1P04083 346 aa16.41■□□□□ 0.22
LIMD2-210ENST00000582055 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
LIMD2-210ENST00000582055 NIM1KQ8IY84 436 aa16.41■□□□□ 0.22
LIMD2-210ENST00000582055 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
LIMD2-210ENST00000582055 TAF1P21675 1872 aa16.41■□□□□ 0.22
LIMD2-210ENST00000582055 RASSF10A6NK89 507 aa16.4■□□□□ 0.22
LIMD2-210ENST00000582055 EPS15P42566 896 aa16.4■□□□□ 0.22
LIMD2-210ENST00000582055 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
LIMD2-210ENST00000582055 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
LIMD2-210ENST00000582055 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
LIMD2-210ENST00000582055 PPIP5K2O43314 1243 aa16.39■□□□□ 0.21
LIMD2-210ENST00000582055 BBOX1O75936 387 aa16.39■□□□□ 0.21
LIMD2-210ENST00000582055 SCNN1DP51172 638 aa16.39■□□□□ 0.21
LIMD2-210ENST00000582055 AIMP1Q12904 312 aaKnown RBP16.39■□□□□ 0.21
LIMD2-210ENST00000582055 USP50Q70EL3 339 aaPredicted RBP16.39■□□□□ 0.21
LIMD2-210ENST00000582055 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
LIMD2-210ENST00000582055 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.21
LIMD2-210ENST00000582055 NECTIN2Q92692 538 aa16.39■□□□□ 0.21
LIMD2-210ENST00000582055 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
LIMD2-210ENST00000582055 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
LIMD2-210ENST00000582055 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
LIMD2-210ENST00000582055 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
LIMD2-210ENST00000582055 AOC3Q16853 763 aa16.38■□□□□ 0.21
LIMD2-210ENST00000582055 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
LIMD2-210ENST00000582055 SP8Q8IXZ3 490 aa16.38■□□□□ 0.21
LIMD2-210ENST00000582055 XAGE3Q8WTP9 111 aa16.38■□□□□ 0.21
LIMD2-210ENST00000582055 WBP1LQ9NX94 342 aa16.38■□□□□ 0.21
LIMD2-210ENST00000582055 ABT1Q9ULW3 272 aaKnown RBP16.38■□□□□ 0.21
LIMD2-210ENST00000582055 ABCC4O15439 1325 aa16.38■□□□□ 0.21
LIMD2-210ENST00000582055 NEUROD2Q15784 382 aa16.37■□□□□ 0.21
LIMD2-210ENST00000582055 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
LIMD2-210ENST00000582055 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
LIMD2-210ENST00000582055 ZNRF3Q9ULT6 936 aa16.37■□□□□ 0.21
LIMD2-210ENST00000582055 CHL1O00533 1208 aa16.36■□□□□ 0.21
LIMD2-210ENST00000582055 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
LIMD2-210ENST00000582055 DPP8Q6V1X1 898 aaPredicted RBP16.36■□□□□ 0.21
LIMD2-210ENST00000582055 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
LIMD2-210ENST00000582055 MPNDQ8N594 471 aa16.36■□□□□ 0.21
LIMD2-210ENST00000582055 WDR33Q9C0J8 1336 aaKnown RBP16.36■□□□□ 0.21
LIMD2-210ENST00000582055 MAP2K1Q02750 393 aaPredicted RBP16.35■□□□□ 0.21
LIMD2-210ENST00000582055 CXCL9Q07325 125 aa16.35■□□□□ 0.21
LIMD2-210ENST00000582055 CCDC146Q8IYE0 955 aa16.35■□□□□ 0.21
LIMD2-210ENST00000582055 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
LIMD2-210ENST00000582055 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
LIMD2-210ENST00000582055 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
LIMD2-210ENST00000582055 SH3TC1Q8TE82 1336 aa16.35■□□□□ 0.21
LIMD2-210ENST00000582055 DDX60Q8IY21 1712 aaKnown RBP16.34■□□□□ 0.21
LIMD2-210ENST00000582055 FMR1Q06787 632 aaKnown RBP eCLIP16.34■□□□□ 0.21
LIMD2-210ENST00000582055 RUNDC1Q96C34 613 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms