RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 TAF1DQ9H5J8 278 aaPredicted RBP17.89■□□□□ 0.45
CUEDC1-203ENST00000577422 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
CUEDC1-203ENST00000577422 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
CUEDC1-203ENST00000577422 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
CUEDC1-203ENST00000577422 BABAM1Q9NWV8 329 aa17.88■□□□□ 0.45
CUEDC1-203ENST00000577422 ANXA1P04083 346 aa17.87■□□□□ 0.45
CUEDC1-203ENST00000577422 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
CUEDC1-203ENST00000577422 IQCA1LA6NCM1 817 aa17.86■□□□□ 0.45
CUEDC1-203ENST00000577422 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
CUEDC1-203ENST00000577422 CREBZFQ9NS37 354 aa17.86■□□□□ 0.45
CUEDC1-203ENST00000577422 ANKRD36CQ5JPF3 1778 aa17.86■□□□□ 0.45
CUEDC1-203ENST00000577422 ITGBL1O95965 494 aaPredicted RBP17.85■□□□□ 0.45
CUEDC1-203ENST00000577422 EIF2S2P20042 333 aaKnown RBP17.85■□□□□ 0.45
CUEDC1-203ENST00000577422 KRT24Q2M2I5 525 aa17.85■□□□□ 0.45
CUEDC1-203ENST00000577422 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
CUEDC1-203ENST00000577422 LAMB2P55268 1798 aa17.84■□□□□ 0.45
CUEDC1-203ENST00000577422 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
CUEDC1-203ENST00000577422 MYBBP1AQ9BQG0 1328 aaKnown RBP17.84■□□□□ 0.45
CUEDC1-203ENST00000577422 SLC10A5Q5PT55 438 aa17.84■□□□□ 0.45
CUEDC1-203ENST00000577422 CC2D2BQ6DHV5 1058 aa17.84■□□□□ 0.45
CUEDC1-203ENST00000577422 CRAMP1Q96RY5 1269 aa17.84■□□□□ 0.45
CUEDC1-203ENST00000577422 CHL1O00533 1208 aa17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 HSPA1AP0DMV8 641 aaKnown RBP17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 HSPA1BP0DMV9 641 aaKnown RBP17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 PARP10Q53GL7 1025 aa17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 GPC2Q8N158 579 aa17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 RPGRQ92834 1020 aaKnown RBP17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 HACL1Q9UJ83 578 aa17.83■□□□□ 0.44
CUEDC1-203ENST00000577422 EPHX2P34913 555 aa17.82■□□□□ 0.44
CUEDC1-203ENST00000577422 PPP1R42Q7Z4L9 355 aa17.82■□□□□ 0.44
CUEDC1-203ENST00000577422 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
CUEDC1-203ENST00000577422 LMOD3Q0VAK6 560 aa17.81■□□□□ 0.44
CUEDC1-203ENST00000577422 COPS6Q7L5N1 327 aa17.81■□□□□ 0.44
CUEDC1-203ENST00000577422 RBM17Q96I25 401 aaKnown RBP17.81■□□□□ 0.44
CUEDC1-203ENST00000577422 CNTNAP1P78357 1384 aa17.8■□□□□ 0.44
CUEDC1-203ENST00000577422 ABCC4O15439 1325 aa17.8■□□□□ 0.44
CUEDC1-203ENST00000577422 NLRP10Q86W26 655 aa17.8■□□□□ 0.44
CUEDC1-203ENST00000577422 XAGE3Q8WTP9 111 aa17.8■□□□□ 0.44
CUEDC1-203ENST00000577422 NECTIN2Q92692 538 aa17.8■□□□□ 0.44
CUEDC1-203ENST00000577422 UTP14AQ9BVJ6 771 aaKnown RBP17.8■□□□□ 0.44
CUEDC1-203ENST00000577422 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
CUEDC1-203ENST00000577422 SCNN1DP51172 638 aa17.79■□□□□ 0.44
CUEDC1-203ENST00000577422 NEUROD2Q15784 382 aa17.79■□□□□ 0.44
CUEDC1-203ENST00000577422 GRIPAP1Q4V328 841 aa17.79■□□□□ 0.44
CUEDC1-203ENST00000577422 EAPPQ56P03 285 aaPredicted RBP17.79■□□□□ 0.44
CUEDC1-203ENST00000577422 RUNDC1Q96C34 613 aa17.79■□□□□ 0.44
CUEDC1-203ENST00000577422 NLRP3Q96P20 1036 aa17.79■□□□□ 0.44
CUEDC1-203ENST00000577422 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
CUEDC1-203ENST00000577422 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
CUEDC1-203ENST00000577422 TCERG1O14776 1098 aaKnown RBP17.78■□□□□ 0.44
CUEDC1-203ENST00000577422 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
CUEDC1-203ENST00000577422 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
CUEDC1-203ENST00000577422 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
CUEDC1-203ENST00000577422 DDX60Q8IY21 1712 aaKnown RBP17.78■□□□□ 0.44
CUEDC1-203ENST00000577422 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
CUEDC1-203ENST00000577422 MAP1SQ66K74 1059 aaPredicted RBP17.77■□□□□ 0.44
CUEDC1-203ENST00000577422 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.44
CUEDC1-203ENST00000577422 RTFDC1Q9BY42 306 aaPredicted RBP17.77■□□□□ 0.44
CUEDC1-203ENST00000577422 CHPF2Q9P2E5 772 aa17.77■□□□□ 0.44
CUEDC1-203ENST00000577422 DUOX1Q9NRD9 1551 aa17.77■□□□□ 0.44
CUEDC1-203ENST00000577422 COL4A1P02462 1669 aa17.77■□□□□ 0.43
CUEDC1-203ENST00000577422 TAF1P21675 1872 aa17.76■□□□□ 0.43
CUEDC1-203ENST00000577422 TMEM88BA6NKF7 163 aa17.76■□□□□ 0.43
CUEDC1-203ENST00000577422 HCLS1P14317 486 aaPredicted RBP17.76■□□□□ 0.43
CUEDC1-203ENST00000577422 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
CUEDC1-203ENST00000577422 LARGE2Q8N3Y3 721 aa17.76■□□□□ 0.43
CUEDC1-203ENST00000577422 LRRC37AA6NMS7 1700 aa17.75■□□□□ 0.43
CUEDC1-203ENST00000577422 EPS15P42566 896 aa17.75■□□□□ 0.43
CUEDC1-203ENST00000577422 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
CUEDC1-203ENST00000577422 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
CUEDC1-203ENST00000577422 GJA3Q9Y6H8 435 aa17.75■□□□□ 0.43
CUEDC1-203ENST00000577422 VEGFBP49765 207 aa17.74■□□□□ 0.43
CUEDC1-203ENST00000577422 AOC3Q16853 763 aa17.74■□□□□ 0.43
CUEDC1-203ENST00000577422 CLEC11AQ9Y240 323 aa17.74■□□□□ 0.43
CUEDC1-203ENST00000577422 PPIP5K2O43314 1243 aa17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 HOXB7P09629 217 aa17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 ZNF853P0CG23 659 aa17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 SP8Q8IXZ3 490 aa17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 ISCA1Q9BUE6 129 aa17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 VPS33BQ9H267 617 aa17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 PRKRIP1Q9H875 184 aaPredicted RBP17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 TRMT112Q9UI30 125 aaKnown RBP17.73■□□□□ 0.43
CUEDC1-203ENST00000577422 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
CUEDC1-203ENST00000577422 RASSF10A6NK89 507 aa17.72■□□□□ 0.43
CUEDC1-203ENST00000577422 BBOX1O75936 387 aa17.72■□□□□ 0.43
CUEDC1-203ENST00000577422 CXCL9Q07325 125 aa17.72■□□□□ 0.43
CUEDC1-203ENST00000577422 HDGFL1Q5TGJ6 251 aa17.72■□□□□ 0.43
CUEDC1-203ENST00000577422 TNS4Q8IZW8 715 aa17.72■□□□□ 0.43
CUEDC1-203ENST00000577422 MBIPQ9NS73 344 aa17.72■□□□□ 0.43
CUEDC1-203ENST00000577422 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
CUEDC1-203ENST00000577422 FOXN1O15353 648 aa17.71■□□□□ 0.43
CUEDC1-203ENST00000577422 GRAPQ13588 217 aa17.71■□□□□ 0.43
CUEDC1-203ENST00000577422 WDR43Q15061 677 aaKnown RBP eCLIP17.71■□□□□ 0.43
CUEDC1-203ENST00000577422 NIM1KQ8IY84 436 aa17.71■□□□□ 0.43
CUEDC1-203ENST00000577422 PLBD2Q8NHP8 589 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms