RNA–Protein interactions for RNA: ENST00000573123.1

CXCL16-202, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS ALT2 TSL 2

Gene CXCL16, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-202ENST00000573123 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.3
CXCL16-202ENST00000573123 LDHDQ86WU2 507 aa23.2■■□□□ 1.3
CXCL16-202ENST00000573123 JDP2Q8WYK2 163 aa23.2■■□□□ 1.3
CXCL16-202ENST00000573123 PDIA6Q15084 440 aa23.19■■□□□ 1.3
CXCL16-202ENST00000573123 HSP90AB3PQ58FF7 597 aa23.19■■□□□ 1.3
CXCL16-202ENST00000573123 CRAMP1Q96RY5 1269 aa23.19■■□□□ 1.3
CXCL16-202ENST00000573123 TAF1DQ9H5J8 278 aaPredicted RBP23.19■■□□□ 1.3
CXCL16-202ENST00000573123 RNF123Q5XPI4 1314 aa23.18■■□□□ 1.3
CXCL16-202ENST00000573123 LRP10Q7Z4F1 713 aa23.18■■□□□ 1.3
CXCL16-202ENST00000573123 UTP14AQ9BVJ6 771 aaKnown RBP23.18■■□□□ 1.3
CXCL16-202ENST00000573123 TMX4Q9H1E5 349 aaPredicted RBP23.18■■□□□ 1.3
CXCL16-202ENST00000573123 HACL1Q9UJ83 578 aa23.18■■□□□ 1.3
CXCL16-202ENST00000573123 SNED1Q8TER0 1413 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 FZD9O00144 591 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 PPEF1O14829 653 aaPredicted RBP23.17■■□□□ 1.3
CXCL16-202ENST00000573123 POTEIP0CG38 1075 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 POTEJP0CG39 1038 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 CCDC146Q8IYE0 955 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 RUNDC1Q96C34 613 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 NLRP3Q96P20 1036 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 CREBZFQ9NS37 354 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 SCN4AP35499 1836 aa23.17■■□□□ 1.3
CXCL16-202ENST00000573123 PROSER3Q2NL68 480 aa23.16■■□□□ 1.3
CXCL16-202ENST00000573123 ANXA1P04083 346 aa23.15■■□□□ 1.3
CXCL16-202ENST00000573123 EIF6P56537 245 aaKnown RBP23.15■■□□□ 1.3
CXCL16-202ENST00000573123 EAPPQ56P03 285 aaPredicted RBP23.15■■□□□ 1.3
CXCL16-202ENST00000573123 GPC2Q8N158 579 aa23.15■■□□□ 1.3
CXCL16-202ENST00000573123 CHL1O00533 1208 aa23.14■■□□□ 1.29
CXCL16-202ENST00000573123 PNMA8AQ86V59 439 aaPredicted RBP23.14■■□□□ 1.29
CXCL16-202ENST00000573123 EPHX2P34913 555 aa23.13■■□□□ 1.29
CXCL16-202ENST00000573123 AIMP1Q12904 312 aaKnown RBP23.13■■□□□ 1.29
CXCL16-202ENST00000573123 SLC10A5Q5PT55 438 aa23.13■■□□□ 1.29
CXCL16-202ENST00000573123 COPS6Q7L5N1 327 aa23.13■■□□□ 1.29
CXCL16-202ENST00000573123 LARGE2Q8N3Y3 721 aa23.13■■□□□ 1.29
CXCL16-202ENST00000573123 XAGE3Q8WTP9 111 aa23.13■■□□□ 1.29
CXCL16-202ENST00000573123 NECTIN2Q92692 538 aa23.13■■□□□ 1.29
CXCL16-202ENST00000573123 DDX21Q9NR30 783 aaKnown RBP eCLIP23.13■■□□□ 1.29
CXCL16-202ENST00000573123 LAS1LQ9Y4W2 734 aaKnown RBP23.13■■□□□ 1.29
CXCL16-202ENST00000573123 C3orf67Q6ZVT6 689 aa23.12■■□□□ 1.29
CXCL16-202ENST00000573123 CLEC11AQ9Y240 323 aa23.12■■□□□ 1.29
CXCL16-202ENST00000573123 PASKQ96RG2 1323 aa23.11■■□□□ 1.29
CXCL16-202ENST00000573123 TCERG1O14776 1098 aaKnown RBP23.11■■□□□ 1.29
CXCL16-202ENST00000573123 HOXB7P09629 217 aa23.11■■□□□ 1.29
CXCL16-202ENST00000573123 LMOD1P29536 600 aaPredicted RBP23.1■■□□□ 1.29
CXCL16-202ENST00000573123 NLRP10Q86W26 655 aa23.1■■□□□ 1.29
CXCL16-202ENST00000573123 TRIM35Q9UPQ4 493 aa23.1■■□□□ 1.29
CXCL16-202ENST00000573123 HSPA1AP0DMV8 641 aaKnown RBP23.09■■□□□ 1.29
CXCL16-202ENST00000573123 HSPA1BP0DMV9 641 aaKnown RBP23.09■■□□□ 1.29
CXCL16-202ENST00000573123 TCIRG1Q13488 830 aa23.09■■□□□ 1.29
CXCL16-202ENST00000573123 HDGFL1Q5TGJ6 251 aa23.09■■□□□ 1.29
CXCL16-202ENST00000573123 NIM1KQ8IY84 436 aa23.09■■□□□ 1.29
CXCL16-202ENST00000573123 ATP6V0A2Q9Y487 856 aa23.09■■□□□ 1.29
CXCL16-202ENST00000573123 GJA3Q9Y6H8 435 aa23.09■■□□□ 1.29
CXCL16-202ENST00000573123 ABCC4O15439 1325 aa23.08■■□□□ 1.29
CXCL16-202ENST00000573123 SUPT20HQ8NEM7 779 aa23.08■■□□□ 1.29
CXCL16-202ENST00000573123 VPS33BQ9H267 617 aa23.08■■□□□ 1.29
CXCL16-202ENST00000573123 CHPF2Q9P2E5 772 aa23.08■■□□□ 1.29
CXCL16-202ENST00000573123 MKRN1Q9UHC7 482 aaKnown RBP23.08■■□□□ 1.29
CXCL16-202ENST00000573123 TRMT112Q9UI30 125 aaKnown RBP23.08■■□□□ 1.29
CXCL16-202ENST00000573123 ADAMTS8Q9UP79 889 aa23.08■■□□□ 1.29
CXCL16-202ENST00000573123 SH3TC1Q8TE82 1336 aa23.08■■□□□ 1.28
CXCL16-202ENST00000573123 PPIP5K2O43314 1243 aa23.07■■□□□ 1.28
CXCL16-202ENST00000573123 KRT24Q2M2I5 525 aa23.07■■□□□ 1.28
CXCL16-202ENST00000573123 TMEM88BA6NKF7 163 aa23.06■■□□□ 1.28
CXCL16-202ENST00000573123 BBOX1O75936 387 aa23.06■■□□□ 1.28
CXCL16-202ENST00000573123 COL13A1Q5TAT6 717 aaPredicted RBP23.06■■□□□ 1.28
CXCL16-202ENST00000573123 DDX46Q7L014 1031 aaKnown RBP23.06■■□□□ 1.28
CXCL16-202ENST00000573123 CFAP44Q96MT7 982 aa23.06■■□□□ 1.28
CXCL16-202ENST00000573123 PCNTO95613 3336 aa23.06■■□□□ 1.28
CXCL16-202ENST00000573123 CNTNAP1P78357 1384 aa23.05■■□□□ 1.28
CXCL16-202ENST00000573123 ANKRD36CQ5JPF3 1778 aa23.05■■□□□ 1.28
CXCL16-202ENST00000573123 ITGBL1O95965 494 aaPredicted RBP23.05■■□□□ 1.28
CXCL16-202ENST00000573123 HCLS1P14317 486 aaPredicted RBP23.05■■□□□ 1.28
CXCL16-202ENST00000573123 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
CXCL16-202ENST00000573123 DBF4Q9UBU7 674 aaPredicted RBP23.05■■□□□ 1.28
CXCL16-202ENST00000573123 COL4A5P29400 1685 aa23.05■■□□□ 1.28
CXCL16-202ENST00000573123 PLBD2Q8NHP8 589 aa23.04■■□□□ 1.28
CXCL16-202ENST00000573123 ADAMTSL1Q8N6G6 1762 aa23.04■■□□□ 1.28
CXCL16-202ENST00000573123 GRAPQ13588 217 aa23.03■■□□□ 1.28
CXCL16-202ENST00000573123 AOC3Q16853 763 aa23.03■■□□□ 1.28
CXCL16-202ENST00000573123 DPP8Q6V1X1 898 aaPredicted RBP23.03■■□□□ 1.28
CXCL16-202ENST00000573123 SLC51AQ86UW1 340 aa23.03■■□□□ 1.28
CXCL16-202ENST00000573123 SP8Q8IXZ3 490 aa23.03■■□□□ 1.28
CXCL16-202ENST00000573123 CNTROBQ8N137 903 aa23.03■■□□□ 1.28
CXCL16-202ENST00000573123 GRAPLQ8TC17 118 aaPredicted RBP23.03■■□□□ 1.28
CXCL16-202ENST00000573123 HYPKQ9NX55 129 aa23.03■■□□□ 1.28
CXCL16-202ENST00000573123 CALD1Q05682 793 aaKnown RBP23.02■■□□□ 1.28
CXCL16-202ENST00000573123 MAP1SQ66K74 1059 aaPredicted RBP23.02■■□□□ 1.28
CXCL16-202ENST00000573123 ANKRD13DQ6ZTN6 518 aa23.02■■□□□ 1.28
CXCL16-202ENST00000573123 TMC4Q7Z404 712 aa23.02■■□□□ 1.28
CXCL16-202ENST00000573123 TNS4Q8IZW8 715 aa23.02■■□□□ 1.28
CXCL16-202ENST00000573123 MPNDQ8N594 471 aa23.02■■□□□ 1.28
CXCL16-202ENST00000573123 RTFDC1Q9BY42 306 aaPredicted RBP23.02■■□□□ 1.28
CXCL16-202ENST00000573123 SCNN1DP51172 638 aa23.01■■□□□ 1.27
CXCL16-202ENST00000573123 DUSP27Q5VZP5 1158 aa23.01■■□□□ 1.27
CXCL16-202ENST00000573123 USP50Q70EL3 339 aaPredicted RBP23■■□□□ 1.27
CXCL16-202ENST00000573123 MBIPQ9NS73 344 aa23■■□□□ 1.27
CXCL16-202ENST00000573123 ZNRF3Q9ULT6 936 aa23■■□□□ 1.27
CXCL16-202ENST00000573123 ISCA1Q9BUE6 129 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms