RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
UBR1-206ENST00000566493 IQCA1LA6NCM1 817 aa15.64■□□□□ 0.09
UBR1-206ENST00000566493 WDR43Q15061 677 aaKnown RBP eCLIP15.64■□□□□ 0.09
UBR1-206ENST00000566493 NEUROD2Q15784 382 aa15.64■□□□□ 0.09
UBR1-206ENST00000566493 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
UBR1-206ENST00000566493 ZNF277Q9NRM2 450 aaPredicted RBP15.64■□□□□ 0.09
UBR1-206ENST00000566493 IBTKQ9P2D0 1353 aaPredicted RBP15.63■□□□□ 0.09
UBR1-206ENST00000566493 CRY2Q49AN0 593 aa15.63■□□□□ 0.09
UBR1-206ENST00000566493 SUSD4Q5VX71 490 aa15.63■□□□□ 0.09
UBR1-206ENST00000566493 CC2D2BQ6DHV5 1058 aa15.63■□□□□ 0.09
UBR1-206ENST00000566493 OLFM4Q6UX06 510 aa15.63■□□□□ 0.09
UBR1-206ENST00000566493 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
UBR1-206ENST00000566493 CCDC146Q8IYE0 955 aa15.63■□□□□ 0.09
UBR1-206ENST00000566493 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
UBR1-206ENST00000566493 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
UBR1-206ENST00000566493 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
UBR1-206ENST00000566493 IARSP41252 1262 aaKnown RBP15.62■□□□□ 0.09
UBR1-206ENST00000566493 PARP10Q53GL7 1025 aa15.62■□□□□ 0.09
UBR1-206ENST00000566493 CHADLQ6NUI6 762 aa15.62■□□□□ 0.09
UBR1-206ENST00000566493 RBM17Q96I25 401 aaKnown RBP15.62■□□□□ 0.09
UBR1-206ENST00000566493 UBN2Q6ZU65 1347 aa15.62■□□□□ 0.09
UBR1-206ENST00000566493 HOXA10P31260 410 aaPredicted RBP15.61■□□□□ 0.09
UBR1-206ENST00000566493 GRIPAP1Q4V328 841 aa15.61■□□□□ 0.09
UBR1-206ENST00000566493 JMYQ8N9B5 988 aa15.61■□□□□ 0.09
UBR1-206ENST00000566493 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
UBR1-206ENST00000566493 TMX4Q9H1E5 349 aaPredicted RBP15.61■□□□□ 0.09
UBR1-206ENST00000566493 LAS1LQ9Y4W2 734 aaKnown RBP15.61■□□□□ 0.09
UBR1-206ENST00000566493 SCN4AP35499 1836 aa15.61■□□□□ 0.09
UBR1-206ENST00000566493 RIC1Q4ADV7 1423 aa15.6■□□□□ 0.09
UBR1-206ENST00000566493 NTSR2O95665 410 aa15.6■□□□□ 0.09
UBR1-206ENST00000566493 PDIA6Q15084 440 aa15.6■□□□□ 0.09
UBR1-206ENST00000566493 HSP90AB3PQ58FF7 597 aa15.6■□□□□ 0.09
UBR1-206ENST00000566493 JDP2Q8WYK2 163 aa15.6■□□□□ 0.09
UBR1-206ENST00000566493 NECTIN2Q92692 538 aa15.6■□□□□ 0.09
UBR1-206ENST00000566493 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
UBR1-206ENST00000566493 NLRP3Q96P20 1036 aa15.6■□□□□ 0.09
UBR1-206ENST00000566493 PSMD1Q99460 953 aa15.6■□□□□ 0.09
UBR1-206ENST00000566493 UTP14AQ9BVJ6 771 aaKnown RBP15.6■□□□□ 0.09
UBR1-206ENST00000566493 ANXA1P04083 346 aa15.59■□□□□ 0.09
UBR1-206ENST00000566493 CRAMP1Q96RY5 1269 aa15.59■□□□□ 0.09
UBR1-206ENST00000566493 TAF1DQ9H5J8 278 aaPredicted RBP15.59■□□□□ 0.09
UBR1-206ENST00000566493 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.08
UBR1-206ENST00000566493 PPEF1O14829 653 aaPredicted RBP15.58■□□□□ 0.08
UBR1-206ENST00000566493 AIMP1Q12904 312 aaKnown RBP15.58■□□□□ 0.08
UBR1-206ENST00000566493 PROSER3Q2NL68 480 aa15.58■□□□□ 0.08
UBR1-206ENST00000566493 COPS6Q7L5N1 327 aa15.58■□□□□ 0.08
UBR1-206ENST00000566493 LRP10Q7Z4F1 713 aa15.58■□□□□ 0.08
UBR1-206ENST00000566493 LDHDQ86WU2 507 aa15.58■□□□□ 0.08
UBR1-206ENST00000566493 HACL1Q9UJ83 578 aa15.58■□□□□ 0.08
UBR1-206ENST00000566493 ZNF541Q9H0D2 1346 aa15.58■□□□□ 0.08
UBR1-206ENST00000566493 FZD9O00144 591 aa15.57■□□□□ 0.08
UBR1-206ENST00000566493 CHL1O00533 1208 aa15.57■□□□□ 0.08
UBR1-206ENST00000566493 POTEIP0CG38 1075 aa15.57■□□□□ 0.08
UBR1-206ENST00000566493 POTEJP0CG39 1038 aa15.57■□□□□ 0.08
UBR1-206ENST00000566493 EIF6P56537 245 aaKnown RBP15.57■□□□□ 0.08
UBR1-206ENST00000566493 EAPPQ56P03 285 aaPredicted RBP15.57■□□□□ 0.08
UBR1-206ENST00000566493 XAGE3Q8WTP9 111 aa15.57■□□□□ 0.08
UBR1-206ENST00000566493 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
UBR1-206ENST00000566493 ADAMTS8Q9UP79 889 aa15.57■□□□□ 0.08
UBR1-206ENST00000566493 CLEC11AQ9Y240 323 aa15.57■□□□□ 0.08
UBR1-206ENST00000566493 SLC10A5Q5PT55 438 aa15.56■□□□□ 0.08
UBR1-206ENST00000566493 GPC2Q8N158 579 aa15.56■□□□□ 0.08
UBR1-206ENST00000566493 TRIM35Q9UPQ4 493 aa15.56■□□□□ 0.08
UBR1-206ENST00000566493 RNF123Q5XPI4 1314 aa15.56■□□□□ 0.08
UBR1-206ENST00000566493 ANKRD36CQ5JPF3 1778 aa15.56■□□□□ 0.08
UBR1-206ENST00000566493 EPHX2P34913 555 aa15.55■□□□□ 0.08
UBR1-206ENST00000566493 C3orf67Q6ZVT6 689 aa15.55■□□□□ 0.08
UBR1-206ENST00000566493 PNMA8AQ86V59 439 aaPredicted RBP15.55■□□□□ 0.08
UBR1-206ENST00000566493 LARGE2Q8N3Y3 721 aa15.55■□□□□ 0.08
UBR1-206ENST00000566493 CREBZFQ9NS37 354 aa15.55■□□□□ 0.08
UBR1-206ENST00000566493 GJA3Q9Y6H8 435 aa15.55■□□□□ 0.08
UBR1-206ENST00000566493 SNED1Q8TER0 1413 aa15.54■□□□□ 0.08
UBR1-206ENST00000566493 TCIRG1Q13488 830 aa15.54■□□□□ 0.08
UBR1-206ENST00000566493 KRT24Q2M2I5 525 aa15.54■□□□□ 0.08
UBR1-206ENST00000566493 HDGFL1Q5TGJ6 251 aa15.54■□□□□ 0.08
UBR1-206ENST00000566493 NLRP10Q86W26 655 aa15.54■□□□□ 0.08
UBR1-206ENST00000566493 TRMT112Q9UI30 125 aaKnown RBP15.54■□□□□ 0.08
UBR1-206ENST00000566493 HOXB7P09629 217 aa15.53■□□□□ 0.08
UBR1-206ENST00000566493 LMOD1P29536 600 aaPredicted RBP15.53■□□□□ 0.08
UBR1-206ENST00000566493 NIM1KQ8IY84 436 aa15.53■□□□□ 0.08
UBR1-206ENST00000566493 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
UBR1-206ENST00000566493 CHPF2Q9P2E5 772 aa15.53■□□□□ 0.08
UBR1-206ENST00000566493 ATP6V0A2Q9Y487 856 aa15.53■□□□□ 0.08
UBR1-206ENST00000566493 ABCC4O15439 1325 aa15.52■□□□□ 0.08
UBR1-206ENST00000566493 SH3TC1Q8TE82 1336 aa15.52■□□□□ 0.08
UBR1-206ENST00000566493 PPIP5K2O43314 1243 aa15.52■□□□□ 0.08
UBR1-206ENST00000566493 BBOX1O75936 387 aa15.52■□□□□ 0.08
UBR1-206ENST00000566493 DDX46Q7L014 1031 aaKnown RBP15.52■□□□□ 0.08
UBR1-206ENST00000566493 SUPT20HQ8NEM7 779 aa15.52■□□□□ 0.08
UBR1-206ENST00000566493 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
UBR1-206ENST00000566493 DBF4Q9UBU7 674 aaPredicted RBP15.52■□□□□ 0.08
UBR1-206ENST00000566493 MKRN1Q9UHC7 482 aaKnown RBP15.52■□□□□ 0.08
UBR1-206ENST00000566493 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
UBR1-206ENST00000566493 ANKRD13DQ6ZTN6 518 aa15.51■□□□□ 0.07
UBR1-206ENST00000566493 SP8Q8IXZ3 490 aa15.51■□□□□ 0.07
UBR1-206ENST00000566493 PLBD2Q8NHP8 589 aa15.51■□□□□ 0.07
UBR1-206ENST00000566493 VPS33BQ9H267 617 aa15.51■□□□□ 0.07
UBR1-206ENST00000566493 PASKQ96RG2 1323 aa15.5■□□□□ 0.07
UBR1-206ENST00000566493 LAMB2P55268 1798 aa15.5■□□□□ 0.07
UBR1-206ENST00000566493 TMEM88BA6NKF7 163 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms