RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 CREBZFQ9NS37 354 aa19.52■□□□□ 0.72
IFT140-207ENST00000566052 NTSR2O95665 410 aa19.51■□□□□ 0.71
IFT140-207ENST00000566052 GPTP24298 496 aa19.51■□□□□ 0.71
IFT140-207ENST00000566052 CRAMP1Q96RY5 1269 aa19.51■□□□□ 0.71
IFT140-207ENST00000566052 PASKQ96RG2 1323 aa19.51■□□□□ 0.71
IFT140-207ENST00000566052 ANKRD36CQ5JPF3 1778 aa19.5■□□□□ 0.71
IFT140-207ENST00000566052 TMPOP42166 694 aaKnown RBP19.5■□□□□ 0.71
IFT140-207ENST00000566052 PARP10Q53GL7 1025 aa19.5■□□□□ 0.71
IFT140-207ENST00000566052 COL13A1Q5TAT6 717 aaPredicted RBP19.5■□□□□ 0.71
IFT140-207ENST00000566052 RPGRQ92834 1020 aaKnown RBP19.5■□□□□ 0.71
IFT140-207ENST00000566052 LMOD3Q0VAK6 560 aa19.49■□□□□ 0.71
IFT140-207ENST00000566052 SLC10A5Q5PT55 438 aa19.49■□□□□ 0.71
IFT140-207ENST00000566052 PPP1R42Q7Z4L9 355 aa19.49■□□□□ 0.71
IFT140-207ENST00000566052 HACL1Q9UJ83 578 aa19.49■□□□□ 0.71
IFT140-207ENST00000566052 GPC2Q8N158 579 aa19.48■□□□□ 0.71
IFT140-207ENST00000566052 JDP2Q8WYK2 163 aa19.48■□□□□ 0.71
IFT140-207ENST00000566052 COL4A5P29400 1685 aa19.48■□□□□ 0.71
IFT140-207ENST00000566052 ITGBL1O95965 494 aaPredicted RBP19.47■□□□□ 0.71
IFT140-207ENST00000566052 RBM17Q96I25 401 aaKnown RBP19.47■□□□□ 0.71
IFT140-207ENST00000566052 RNF123Q5XPI4 1314 aa19.47■□□□□ 0.71
IFT140-207ENST00000566052 LAMB2P55268 1798 aa19.47■□□□□ 0.71
IFT140-207ENST00000566052 EIF2S2P20042 333 aaKnown RBP19.46■□□□□ 0.71
IFT140-207ENST00000566052 EPHX2P34913 555 aa19.46■□□□□ 0.71
IFT140-207ENST00000566052 PROSER3Q2NL68 480 aa19.46■□□□□ 0.71
IFT140-207ENST00000566052 C3orf67Q6ZVT6 689 aa19.46■□□□□ 0.71
IFT140-207ENST00000566052 PNMA8AQ86V59 439 aaPredicted RBP19.46■□□□□ 0.71
IFT140-207ENST00000566052 MYBBP1AQ9BQG0 1328 aaKnown RBP19.46■□□□□ 0.71
IFT140-207ENST00000566052 HSPA1AP0DMV8 641 aaKnown RBP19.45■□□□□ 0.7
IFT140-207ENST00000566052 HSPA1BP0DMV9 641 aaKnown RBP19.45■□□□□ 0.7
IFT140-207ENST00000566052 NLRP3Q96P20 1036 aa19.45■□□□□ 0.7
IFT140-207ENST00000566052 CHL1O00533 1208 aa19.44■□□□□ 0.7
IFT140-207ENST00000566052 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
IFT140-207ENST00000566052 UTP14AQ9BVJ6 771 aaKnown RBP19.44■□□□□ 0.7
IFT140-207ENST00000566052 ANXA1P04083 346 aa19.43■□□□□ 0.7
IFT140-207ENST00000566052 EAPPQ56P03 285 aaPredicted RBP19.43■□□□□ 0.7
IFT140-207ENST00000566052 HSP90AB3PQ58FF7 597 aa19.43■□□□□ 0.7
IFT140-207ENST00000566052 CNTNAP1P78357 1384 aa19.43■□□□□ 0.7
IFT140-207ENST00000566052 LTBP1Q14766 1721 aa19.42■□□□□ 0.7
IFT140-207ENST00000566052 EIF6P56537 245 aaKnown RBP19.42■□□□□ 0.7
IFT140-207ENST00000566052 DDX10Q13206 875 aaKnown RBP19.42■□□□□ 0.7
IFT140-207ENST00000566052 COPS6Q7L5N1 327 aa19.42■□□□□ 0.7
IFT140-207ENST00000566052 VPS33BQ9H267 617 aa19.42■□□□□ 0.7
IFT140-207ENST00000566052 DDX21Q9NR30 783 aaKnown RBP eCLIP19.42■□□□□ 0.7
IFT140-207ENST00000566052 MKRN1Q9UHC7 482 aaKnown RBP19.42■□□□□ 0.7
IFT140-207ENST00000566052 TRIM35Q9UPQ4 493 aa19.42■□□□□ 0.7
IFT140-207ENST00000566052 ATP6V0A2Q9Y487 856 aa19.42■□□□□ 0.7
IFT140-207ENST00000566052 TMEM88BA6NKF7 163 aa19.41■□□□□ 0.7
IFT140-207ENST00000566052 NLRP10Q86W26 655 aa19.41■□□□□ 0.7
IFT140-207ENST00000566052 LARGE2Q8N3Y3 721 aa19.41■□□□□ 0.7
IFT140-207ENST00000566052 RUNDC1Q96C34 613 aa19.41■□□□□ 0.7
IFT140-207ENST00000566052 CLEC11AQ9Y240 323 aa19.41■□□□□ 0.7
IFT140-207ENST00000566052 TCIRG1Q13488 830 aa19.4■□□□□ 0.7
IFT140-207ENST00000566052 SLC51AQ86UW1 340 aa19.4■□□□□ 0.7
IFT140-207ENST00000566052 CCDC146Q8IYE0 955 aa19.4■□□□□ 0.7
IFT140-207ENST00000566052 XAGE3Q8WTP9 111 aa19.4■□□□□ 0.7
IFT140-207ENST00000566052 BBOX1O75936 387 aa19.39■□□□□ 0.69
IFT140-207ENST00000566052 NEUROD2Q15784 382 aa19.39■□□□□ 0.69
IFT140-207ENST00000566052 CNTROBQ8N137 903 aa19.39■□□□□ 0.69
IFT140-207ENST00000566052 RTFDC1Q9BY42 306 aaPredicted RBP19.39■□□□□ 0.69
IFT140-207ENST00000566052 ABCC4O15439 1325 aa19.39■□□□□ 0.69
IFT140-207ENST00000566052 TCERG1O14776 1098 aaKnown RBP19.38■□□□□ 0.69
IFT140-207ENST00000566052 HOXB7P09629 217 aa19.38■□□□□ 0.69
IFT140-207ENST00000566052 SCNN1DP51172 638 aa19.38■□□□□ 0.69
IFT140-207ENST00000566052 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
IFT140-207ENST00000566052 SP8Q8IXZ3 490 aa19.38■□□□□ 0.69
IFT140-207ENST00000566052 TNS4Q8IZW8 715 aa19.38■□□□□ 0.69
IFT140-207ENST00000566052 NECTIN2Q92692 538 aa19.38■□□□□ 0.69
IFT140-207ENST00000566052 TMX4Q9H1E5 349 aaPredicted RBP19.38■□□□□ 0.69
IFT140-207ENST00000566052 GJA3Q9Y6H8 435 aa19.38■□□□□ 0.69
IFT140-207ENST00000566052 TAF1P21675 1872 aa19.37■□□□□ 0.69
IFT140-207ENST00000566052 LMOD1P29536 600 aaPredicted RBP19.37■□□□□ 0.69
IFT140-207ENST00000566052 AIMP1Q12904 312 aaKnown RBP19.37■□□□□ 0.69
IFT140-207ENST00000566052 MAP1SQ66K74 1059 aaPredicted RBP19.37■□□□□ 0.69
IFT140-207ENST00000566052 NIM1KQ8IY84 436 aa19.37■□□□□ 0.69
IFT140-207ENST00000566052 ADAMTS8Q9UP79 889 aa19.37■□□□□ 0.69
IFT140-207ENST00000566052 DDX60Q8IY21 1712 aaKnown RBP19.37■□□□□ 0.69
IFT140-207ENST00000566052 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
IFT140-207ENST00000566052 PPIP5K2O43314 1243 aa19.36■□□□□ 0.69
IFT140-207ENST00000566052 VEGFBP49765 207 aa19.36■□□□□ 0.69
IFT140-207ENST00000566052 WDR43Q15061 677 aaKnown RBP eCLIP19.36■□□□□ 0.69
IFT140-207ENST00000566052 SUPT20HQ8NEM7 779 aa19.36■□□□□ 0.69
IFT140-207ENST00000566052 CHPF2Q9P2E5 772 aa19.36■□□□□ 0.69
IFT140-207ENST00000566052 TRMT112Q9UI30 125 aaKnown RBP19.36■□□□□ 0.69
IFT140-207ENST00000566052 LRRC37AA6NMS7 1700 aa19.36■□□□□ 0.69
IFT140-207ENST00000566052 RASSF10A6NK89 507 aa19.35■□□□□ 0.69
IFT140-207ENST00000566052 HCLS1P14317 486 aaPredicted RBP19.35■□□□□ 0.69
IFT140-207ENST00000566052 EPS15P42566 896 aa19.35■□□□□ 0.69
IFT140-207ENST00000566052 USP50Q70EL3 339 aaPredicted RBP19.35■□□□□ 0.69
IFT140-207ENST00000566052 PLBD2Q8NHP8 589 aa19.35■□□□□ 0.69
IFT140-207ENST00000566052 CFAP44Q96MT7 982 aa19.35■□□□□ 0.69
IFT140-207ENST00000566052 TRPM7Q96QT4 1865 aa19.35■□□□□ 0.69
IFT140-207ENST00000566052 AOC3Q16853 763 aa19.34■□□□□ 0.69
IFT140-207ENST00000566052 HDGFL1Q5TGJ6 251 aa19.34■□□□□ 0.69
IFT140-207ENST00000566052 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
IFT140-207ENST00000566052 DBF4Q9UBU7 674 aaPredicted RBP19.34■□□□□ 0.69
IFT140-207ENST00000566052 ZNRF3Q9ULT6 936 aa19.34■□□□□ 0.69
IFT140-207ENST00000566052 GRAPQ13588 217 aa19.33■□□□□ 0.68
IFT140-207ENST00000566052 DPP8Q6V1X1 898 aaPredicted RBP19.33■□□□□ 0.68
IFT140-207ENST00000566052 ANKRD13DQ6ZTN6 518 aa19.33■□□□□ 0.68
IFT140-207ENST00000566052 TMC4Q7Z404 712 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms