RNA–Protein interactions for RNA: ENST00000563805.1

DEF8-212, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 3

Gene DEF8, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-212ENST00000563805 COL13A1Q5TAT6 717 aaPredicted RBP20.27■□□□□ 0.84
DEF8-212ENST00000563805 L3MBTL3Q96JM7 780 aaPredicted RBP20.27■□□□□ 0.84
DEF8-212ENST00000563805 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.83
DEF8-212ENST00000563805 MYBBP1AQ9BQG0 1328 aaKnown RBP20.27■□□□□ 0.83
DEF8-212ENST00000563805 HOXA10P31260 410 aaPredicted RBP20.26■□□□□ 0.83
DEF8-212ENST00000563805 CHADLQ6NUI6 762 aa20.26■□□□□ 0.83
DEF8-212ENST00000563805 RTKN2Q8IZC4 609 aa20.26■□□□□ 0.83
DEF8-212ENST00000563805 TAF1DQ9H5J8 278 aaPredicted RBP20.26■□□□□ 0.83
DEF8-212ENST00000563805 FZD9O00144 591 aa20.25■□□□□ 0.83
DEF8-212ENST00000563805 CHL1O00533 1208 aa20.24■□□□□ 0.83
DEF8-212ENST00000563805 ZNF428Q96B54 188 aa20.24■□□□□ 0.83
DEF8-212ENST00000563805 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
DEF8-212ENST00000563805 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
DEF8-212ENST00000563805 COPS6Q7L5N1 327 aa20.23■□□□□ 0.83
DEF8-212ENST00000563805 XAGE3Q8WTP9 111 aa20.23■□□□□ 0.83
DEF8-212ENST00000563805 PSMD1Q99460 953 aa20.23■□□□□ 0.83
DEF8-212ENST00000563805 ADAMTS8Q9UP79 889 aa20.23■□□□□ 0.83
DEF8-212ENST00000563805 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
DEF8-212ENST00000563805 RPGRQ92834 1020 aaKnown RBP20.22■□□□□ 0.83
DEF8-212ENST00000563805 CRAMP1Q96RY5 1269 aa20.22■□□□□ 0.83
DEF8-212ENST00000563805 SCN4AP35499 1836 aa20.22■□□□□ 0.83
DEF8-212ENST00000563805 PASKQ96RG2 1323 aa20.22■□□□□ 0.83
DEF8-212ENST00000563805 ADAMTSL1Q8N6G6 1762 aa20.21■□□□□ 0.83
DEF8-212ENST00000563805 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
DEF8-212ENST00000563805 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
DEF8-212ENST00000563805 LTBP1Q14766 1721 aa20.21■□□□□ 0.83
DEF8-212ENST00000563805 RNF123Q5XPI4 1314 aa20.21■□□□□ 0.83
DEF8-212ENST00000563805 IQCA1LA6NCM1 817 aa20.2■□□□□ 0.82
DEF8-212ENST00000563805 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
DEF8-212ENST00000563805 ITGBL1O95965 494 aaPredicted RBP20.2■□□□□ 0.82
DEF8-212ENST00000563805 LMOD3Q0VAK6 560 aa20.2■□□□□ 0.82
DEF8-212ENST00000563805 PARP10Q53GL7 1025 aa20.2■□□□□ 0.82
DEF8-212ENST00000563805 LDHDQ86WU2 507 aa20.2■□□□□ 0.82
DEF8-212ENST00000563805 UTP14AQ9BVJ6 771 aaKnown RBP20.2■□□□□ 0.82
DEF8-212ENST00000563805 PPP1R42Q7Z4L9 355 aa20.19■□□□□ 0.82
DEF8-212ENST00000563805 NLRP10Q86W26 655 aa20.19■□□□□ 0.82
DEF8-212ENST00000563805 RBM17Q96I25 401 aaKnown RBP20.19■□□□□ 0.82
DEF8-212ENST00000563805 MKRN1Q9UHC7 482 aaKnown RBP20.19■□□□□ 0.82
DEF8-212ENST00000563805 HACL1Q9UJ83 578 aa20.19■□□□□ 0.82
DEF8-212ENST00000563805 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
DEF8-212ENST00000563805 HSPA1AP0DMV8 641 aaKnown RBP20.18■□□□□ 0.82
DEF8-212ENST00000563805 HSPA1BP0DMV9 641 aaKnown RBP20.18■□□□□ 0.82
DEF8-212ENST00000563805 HCLS1P14317 486 aaPredicted RBP20.18■□□□□ 0.82
DEF8-212ENST00000563805 EPHX2P34913 555 aa20.18■□□□□ 0.82
DEF8-212ENST00000563805 EAPPQ56P03 285 aaPredicted RBP20.18■□□□□ 0.82
DEF8-212ENST00000563805 DDX21Q9NR30 783 aaKnown RBP eCLIP20.18■□□□□ 0.82
DEF8-212ENST00000563805 CREBZFQ9NS37 354 aa20.18■□□□□ 0.82
DEF8-212ENST00000563805 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
DEF8-212ENST00000563805 ABCC4O15439 1325 aa20.18■□□□□ 0.82
DEF8-212ENST00000563805 LAMB2P55268 1798 aa20.18■□□□□ 0.82
DEF8-212ENST00000563805 ANKRD36CQ5JPF3 1778 aa20.18■□□□□ 0.82
DEF8-212ENST00000563805 TCIRG1Q13488 830 aa20.17■□□□□ 0.82
DEF8-212ENST00000563805 CC2D2BQ6DHV5 1058 aa20.17■□□□□ 0.82
DEF8-212ENST00000563805 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
DEF8-212ENST00000563805 CAPN15O75808 1086 aa20.16■□□□□ 0.82
DEF8-212ENST00000563805 GPC2Q8N158 579 aa20.16■□□□□ 0.82
DEF8-212ENST00000563805 SCNN1DP51172 638 aa20.15■□□□□ 0.82
DEF8-212ENST00000563805 WDR43Q15061 677 aaKnown RBP eCLIP20.15■□□□□ 0.82
DEF8-212ENST00000563805 MAP1SQ66K74 1059 aaPredicted RBP20.15■□□□□ 0.82
DEF8-212ENST00000563805 PRKRIP1Q9H875 184 aaPredicted RBP20.15■□□□□ 0.82
DEF8-212ENST00000563805 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
DEF8-212ENST00000563805 GJA3Q9Y6H8 435 aa20.15■□□□□ 0.82
DEF8-212ENST00000563805 COL4A1P02462 1669 aa20.15■□□□□ 0.82
DEF8-212ENST00000563805 TAF1P21675 1872 aa20.14■□□□□ 0.81
DEF8-212ENST00000563805 FMR1Q06787 632 aaKnown RBP eCLIP20.14■□□□□ 0.81
DEF8-212ENST00000563805 AOC3Q16853 763 aa20.14■□□□□ 0.81
DEF8-212ENST00000563805 LARGE2Q8N3Y3 721 aa20.14■□□□□ 0.81
DEF8-212ENST00000563805 JDP2Q8WYK2 163 aa20.14■□□□□ 0.81
DEF8-212ENST00000563805 CLEC11AQ9Y240 323 aa20.14■□□□□ 0.81
DEF8-212ENST00000563805 EPS15P42566 896 aa20.13■□□□□ 0.81
DEF8-212ENST00000563805 HDGFL1Q5TGJ6 251 aa20.13■□□□□ 0.81
DEF8-212ENST00000563805 CNTNAP1P78357 1384 aa20.12■□□□□ 0.81
DEF8-212ENST00000563805 ZNF853P0CG23 659 aa20.12■□□□□ 0.81
DEF8-212ENST00000563805 EIF6P56537 245 aaKnown RBP20.12■□□□□ 0.81
DEF8-212ENST00000563805 HSP90AB3PQ58FF7 597 aa20.12■□□□□ 0.81
DEF8-212ENST00000563805 ISCA1Q9BUE6 129 aa20.12■□□□□ 0.81
DEF8-212ENST00000563805 MBIPQ9NS73 344 aa20.12■□□□□ 0.81
DEF8-212ENST00000563805 TRMT112Q9UI30 125 aaKnown RBP20.12■□□□□ 0.81
DEF8-212ENST00000563805 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
DEF8-212ENST00000563805 PPIP5K2O43314 1243 aa20.11■□□□□ 0.81
DEF8-212ENST00000563805 DUSP27Q5VZP5 1158 aa20.11■□□□□ 0.81
DEF8-212ENST00000563805 CNTROBQ8N137 903 aa20.11■□□□□ 0.81
DEF8-212ENST00000563805 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
DEF8-212ENST00000563805 RTFDC1Q9BY42 306 aaPredicted RBP20.11■□□□□ 0.81
DEF8-212ENST00000563805 DDX60Q8IY21 1712 aaKnown RBP20.1■□□□□ 0.81
DEF8-212ENST00000563805 PLBD2Q8NHP8 589 aa20.1■□□□□ 0.81
DEF8-212ENST00000563805 DUOX1Q9NRD9 1551 aa20.09■□□□□ 0.81
DEF8-212ENST00000563805 SH3TC1Q8TE82 1336 aa20.09■□□□□ 0.81
DEF8-212ENST00000563805 TMEM88BA6NKF7 163 aa20.09■□□□□ 0.81
DEF8-212ENST00000563805 APAF1O14727 1248 aa20.09■□□□□ 0.81
DEF8-212ENST00000563805 VEGFBP49765 207 aa20.09■□□□□ 0.81
DEF8-212ENST00000563805 GRIPAP1Q4V328 841 aa20.09■□□□□ 0.81
DEF8-212ENST00000563805 ANKRD13DQ6ZTN6 518 aa20.09■□□□□ 0.81
DEF8-212ENST00000563805 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
DEF8-212ENST00000563805 SP8Q8IXZ3 490 aa20.09■□□□□ 0.81
DEF8-212ENST00000563805 BBOX1O75936 387 aa20.08■□□□□ 0.81
DEF8-212ENST00000563805 HOXB7P09629 217 aa20.08■□□□□ 0.81
DEF8-212ENST00000563805 CXCL9Q07325 125 aa20.08■□□□□ 0.81
DEF8-212ENST00000563805 CCDC184Q52MB2 194 aa20.08■□□□□ 0.81
DEF8-212ENST00000563805 NIM1KQ8IY84 436 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms