RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 SNED1Q8TER0 1413 aa9.06□□□□□ -0.96
CDH11-208ENST00000563492 FZD9O00144 591 aa9.06□□□□□ -0.96
CDH11-208ENST00000563492 EAPPQ56P03 285 aaPredicted RBP9.06□□□□□ -0.96
CDH11-208ENST00000563492 L3MBTL3Q96JM7 780 aaPredicted RBP9.06□□□□□ -0.96
CDH11-208ENST00000563492 UTP14AQ9BVJ6 771 aaKnown RBP9.06□□□□□ -0.96
CDH11-208ENST00000563492 CHPF2Q9P2E5 772 aa9.06□□□□□ -0.96
CDH11-208ENST00000563492 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
CDH11-208ENST00000563492 COL4A5P29400 1685 aa9.06□□□□□ -0.96
CDH11-208ENST00000563492 TNRC6CQ9HCJ0 1690 aaKnown RBP9.06□□□□□ -0.96
CDH11-208ENST00000563492 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 RNF123Q5XPI4 1314 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 WDR90Q96KV7 1748 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 PCNTO95613 3336 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 CCDC88AQ3V6T2 1871 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 KDM3BQ7LBC6 1761 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 PPEF1O14829 653 aaPredicted RBP9.05□□□□□ -0.96
CDH11-208ENST00000563492 ITGBL1O95965 494 aaPredicted RBP9.05□□□□□ -0.96
CDH11-208ENST00000563492 EPHX2P34913 555 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDH11-208ENST00000563492 SLC10A5Q5PT55 438 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 MAP1SQ66K74 1059 aaPredicted RBP9.05□□□□□ -0.96
CDH11-208ENST00000563492 NLRP10Q86W26 655 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 RUNDC1Q96C34 613 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 RBM17Q96I25 401 aaKnown RBP9.05□□□□□ -0.96
CDH11-208ENST00000563492 CRAMP1Q96RY5 1269 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 HACL1Q9UJ83 578 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 GJA3Q9Y6H8 435 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 DLG5Q8TDM6 1919 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 TIAM2Q8IVF5 1701 aa9.05□□□□□ -0.96
CDH11-208ENST00000563492 ATP5J2-PTCD1G3V325 749 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 HSPA1AP0DMV8 641 aaKnown RBP9.04□□□□□ -0.96
CDH11-208ENST00000563492 HSPA1BP0DMV9 641 aaKnown RBP9.04□□□□□ -0.96
CDH11-208ENST00000563492 EPS15P42566 896 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 TCIRG1Q13488 830 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 WDR43Q15061 677 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDH11-208ENST00000563492 AOC3Q16853 763 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 CCDC184Q52MB2 194 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 PARP10Q53GL7 1025 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 PPP1R42Q7Z4L9 355 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 LDHDQ86WU2 507 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 LARGE2Q8N3Y3 721 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 NLRP3Q96P20 1036 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 PSMD1Q99460 953 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 PRKRIP1Q9H875 184 aaPredicted RBP9.04□□□□□ -0.96
CDH11-208ENST00000563492 DDX21Q9NR30 783 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDH11-208ENST00000563492 BABAM1Q9NWV8 329 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 CLEC11AQ9Y240 323 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 ABCC4O15439 1325 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 PASKQ96RG2 1323 aa9.04□□□□□ -0.96
CDH11-208ENST00000563492 IBTKQ9P2D0 1353 aaPredicted RBP9.03□□□□□ -0.96
CDH11-208ENST00000563492 IQCA1LA6NCM1 817 aa9.03□□□□□ -0.96
CDH11-208ENST00000563492 ELL2O00472 640 aaPredicted RBP9.03□□□□□ -0.96
CDH11-208ENST00000563492 APAF1O14727 1248 aa9.03□□□□□ -0.96
CDH11-208ENST00000563492 LMOD3Q0VAK6 560 aa9.03□□□□□ -0.96
CDH11-208ENST00000563492 RTL5Q5HYW3 569 aaPredicted RBP9.03□□□□□ -0.96
CDH11-208ENST00000563492 JDP2Q8WYK2 163 aa9.03□□□□□ -0.96
CDH11-208ENST00000563492 TRMT112Q9UI30 125 aaKnown RBP9.03□□□□□ -0.96
CDH11-208ENST00000563492 ATP6V0A2Q9Y487 856 aa9.03□□□□□ -0.96
CDH11-208ENST00000563492 PPIP5K2O43314 1243 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 SCNN1DP51172 638 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 HDGFL1Q5TGJ6 251 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 DUSP27Q5VZP5 1158 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 CC2D2BQ6DHV5 1058 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 CNTROBQ8N137 903 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 GPC2Q8N158 579 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 JARID2Q92833 1246 aaPredicted RBP9.02□□□□□ -0.97
CDH11-208ENST00000563492 FAM89AQ96GI7 184 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 MBIPQ9NS73 344 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 CACNA1SQ13698 1873 aa9.02□□□□□ -0.97
CDH11-208ENST00000563492 LAMB4A4D0S4 1761 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 TRAF5O00463 557 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 CAPN15O75808 1086 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 ZNF853P0CG23 659 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 VEGFBP49765 207 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 EIF6P56537 245 aaKnown RBP9.01□□□□□ -0.97
CDH11-208ENST00000563492 CXCL9Q07325 125 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 RIC1Q4ADV7 1423 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 CFAP44Q96MT7 982 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 ISCA1Q9BUE6 129 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 PHAXQ9H814 394 aaKnown RBP9.01□□□□□ -0.97
CDH11-208ENST00000563492 SH3TC1Q8TE82 1336 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 NUP98P52948 1817 aa9.01□□□□□ -0.97
CDH11-208ENST00000563492 SHTN1A0MZ66 631 aa9□□□□□ -0.97
CDH11-208ENST00000563492 TMEM88BA6NKF7 163 aa9□□□□□ -0.97
CDH11-208ENST00000563492 BBOX1O75936 387 aa9□□□□□ -0.97
CDH11-208ENST00000563492 HSP90AB3PQ58FF7 597 aa9□□□□□ -0.97
CDH11-208ENST00000563492 SP8Q8IXZ3 490 aa9□□□□□ -0.97
CDH11-208ENST00000563492 NIM1KQ8IY84 436 aa9□□□□□ -0.97
CDH11-208ENST00000563492 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
CDH11-208ENST00000563492 PLBD2Q8NHP8 589 aa9□□□□□ -0.97
CDH11-208ENST00000563492 CELF1Q92879 486 aaKnown RBP9□□□□□ -0.97
CDH11-208ENST00000563492 GPR101Q96P66 508 aaPredicted RBP9□□□□□ -0.97
CDH11-208ENST00000563492 RTFDC1Q9BY42 306 aaPredicted RBP9□□□□□ -0.97
CDH11-208ENST00000563492 DBF4Q9UBU7 674 aaPredicted RBP9□□□□□ -0.97
CDH11-208ENST00000563492 DICER1Q9UPY3 1922 aaKnown RBP8.99□□□□□ -0.97
CDH11-208ENST00000563492 ARFGEF2Q9Y6D5 1785 aa8.99□□□□□ -0.97
CDH11-208ENST00000563492 FOXN1O15353 648 aa8.99□□□□□ -0.97
CDH11-208ENST00000563492 RAD17O75943 681 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms