RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-204	ENST00000563047	PASK	Q96RG2	1323 aa		27.89	■■■□□ 2.05
GGA2-204	ENST00000563047	PDIA6	Q15084	440 aa		27.88	■■■□□ 2.05
GGA2-204	ENST00000563047	RPGR	Q92834	1020 aa	Known RBP	27.88	■■■□□ 2.05
GGA2-204	ENST00000563047	HACL1	Q9UJ83	578 aa		27.88	■■■□□ 2.05
GGA2-204	ENST00000563047	EIF2S2	P20042	333 aa	Known RBP	27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	RALBP1	Q15311	655 aa		27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	EAPP	Q56P03	285 aa	Predicted RBP	27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	CC2D2B	Q6DHV5	1058 aa		27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	C3orf67	Q6ZVT6	689 aa		27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	SLC51A	Q86UW1	340 aa		27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	MKRN1	Q9UHC7	482 aa	Known RBP	27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	COL4A5	P29400	1685 aa		27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	RNF123	Q5XPI4	1314 aa		27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	ADAMTSL1	Q8N6G6	1762 aa		27.86	■■■□□ 2.05
GGA2-204	ENST00000563047	EPHX2	P34913	555 aa		27.85	■■■□□ 2.05
GGA2-204	ENST00000563047	PROSER3	Q2NL68	480 aa		27.85	■■■□□ 2.05
GGA2-204	ENST00000563047	ITGBL1	O95965	494 aa	Predicted RBP	27.84	■■■□□ 2.05
GGA2-204	ENST00000563047	TMPO	P42166	694 aa	Known RBP	27.84	■■■□□ 2.05
GGA2-204	ENST00000563047	PPP1R42	Q7Z4L9	355 aa		27.84	■■■□□ 2.05
GGA2-204	ENST00000563047	GPC2	Q8N158	579 aa		27.84	■■■□□ 2.05
GGA2-204	ENST00000563047	JDP2	Q8WYK2	163 aa		27.84	■■■□□ 2.05
GGA2-204	ENST00000563047	RBM17	Q96I25	401 aa	Known RBP	27.84	■■■□□ 2.05
GGA2-204	ENST00000563047	CRAMP1	Q96RY5	1269 aa		27.84	■■■□□ 2.05
GGA2-204	ENST00000563047	BABAM1	Q9NWV8	329 aa		27.84	■■■□□ 2.05
GGA2-204	ENST00000563047	ANXA1	P04083	346 aa		27.83	■■■□□ 2.05
GGA2-204	ENST00000563047	PARP10	Q53GL7	1025 aa		27.83	■■■□□ 2.05
GGA2-204	ENST00000563047	PPEF1	O14829	653 aa	Predicted RBP	27.81	■■■□□ 2.04
GGA2-204	ENST00000563047	TNS4	Q8IZW8	715 aa		27.81	■■■□□ 2.04
GGA2-204	ENST00000563047	CLEC11A	Q9Y240	323 aa		27.81	■■■□□ 2.04
GGA2-204	ENST00000563047	CNTNAP1	P78357	1384 aa		27.81	■■■□□ 2.04
GGA2-204	ENST00000563047	TCERG1	O14776	1098 aa	Known RBP	27.8	■■■□□ 2.04
GGA2-204	ENST00000563047	LMOD3	Q0VAK6	560 aa		27.8	■■■□□ 2.04
GGA2-204	ENST00000563047	GRIPAP1	Q4V328	841 aa		27.8	■■■□□ 2.04
GGA2-204	ENST00000563047	PNMA8A	Q86V59	439 aa	Predicted RBP	27.8	■■■□□ 2.04
GGA2-204	ENST00000563047	SLC10A5	Q5PT55	438 aa		27.79	■■■□□ 2.04
GGA2-204	ENST00000563047	NLRP3	Q96P20	1036 aa		27.79	■■■□□ 2.04
GGA2-204	ENST00000563047	UTP14A	Q9BVJ6	771 aa	Known RBP	27.79	■■■□□ 2.04
GGA2-204	ENST00000563047	TMEM88B	A6NKF7	163 aa		27.78	■■■□□ 2.04
GGA2-204	ENST00000563047	EIF6	P56537	245 aa	Known RBP	27.78	■■■□□ 2.04
GGA2-204	ENST00000563047	NECTIN2	Q92692	538 aa		27.78	■■■□□ 2.04
GGA2-204	ENST00000563047	GJA3	Q9Y6H8	435 aa		27.78	■■■□□ 2.04
GGA2-204	ENST00000563047	MAP1S	Q66K74	1059 aa	Predicted RBP	27.77	■■■□□ 2.04
GGA2-204	ENST00000563047	COPS6	Q7L5N1	327 aa		27.77	■■■□□ 2.04
GGA2-204	ENST00000563047	LARGE2	Q8N3Y3	721 aa		27.77	■■■□□ 2.04
GGA2-204	ENST00000563047	LTBP1	Q14766	1721 aa		27.77	■■■□□ 2.04
GGA2-204	ENST00000563047	CCDC146	Q8IYE0	955 aa		27.76	■■■□□ 2.03
GGA2-204	ENST00000563047	CNTROB	Q8N137	903 aa		27.76	■■■□□ 2.03
GGA2-204	ENST00000563047	AIMP1	Q12904	312 aa	Known RBP	27.75	■■■□□ 2.03
GGA2-204	ENST00000563047	NEUROD2	Q15784	382 aa		27.75	■■■□□ 2.03
GGA2-204	ENST00000563047	XAGE3	Q8WTP9	111 aa		27.75	■■■□□ 2.03
GGA2-204	ENST00000563047	ANKRD36C	Q5JPF3	1778 aa		27.75	■■■□□ 2.03
GGA2-204	ENST00000563047	ABCC4	O15439	1325 aa		27.74	■■■□□ 2.03
GGA2-204	ENST00000563047	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.74	■■■□□ 2.03
GGA2-204	ENST00000563047	DDX10	Q13206	875 aa	Known RBP	27.74	■■■□□ 2.03
GGA2-204	ENST00000563047	KRT24	Q2M2I5	525 aa		27.74	■■■□□ 2.03
GGA2-204	ENST00000563047	ATP6V0A2	Q9Y487	856 aa		27.74	■■■□□ 2.03
GGA2-204	ENST00000563047	CHL1	O00533	1208 aa		27.73	■■■□□ 2.03
GGA2-204	ENST00000563047	VEGFB	P49765	207 aa		27.73	■■■□□ 2.03
GGA2-204	ENST00000563047	SCNN1D	P51172	638 aa		27.73	■■■□□ 2.03
GGA2-204	ENST00000563047	NLRP10	Q86W26	655 aa		27.73	■■■□□ 2.03
GGA2-204	ENST00000563047	CAPN15	O75808	1086 aa		27.72	■■■□□ 2.03
GGA2-204	ENST00000563047	EPS15	P42566	896 aa		27.72	■■■□□ 2.03
GGA2-204	ENST00000563047	HSP90AB3P	Q58FF7	597 aa		27.72	■■■□□ 2.03
GGA2-204	ENST00000563047	DDX21	Q9NR30	783 aa	Known RBP eCLIP	27.72	■■■□□ 2.03
GGA2-204	ENST00000563047	TRIM35	Q9UPQ4	493 aa		27.72	■■■□□ 2.03
GGA2-204	ENST00000563047	LAMB2	P55268	1798 aa		27.72	■■■□□ 2.03
GGA2-204	ENST00000563047	PPIP5K2	O43314	1243 aa		27.71	■■■□□ 2.03
GGA2-204	ENST00000563047	HCLS1	P14317	486 aa	Predicted RBP	27.71	■■■□□ 2.03
GGA2-204	ENST00000563047	LMOD1	P29536	600 aa	Predicted RBP	27.71	■■■□□ 2.03
GGA2-204	ENST00000563047	AOC3	Q16853	763 aa		27.71	■■■□□ 2.03
GGA2-204	ENST00000563047	NIM1K	Q8IY84	436 aa		27.71	■■■□□ 2.03
GGA2-204	ENST00000563047	TCIRG1	Q13488	830 aa		27.7	■■■□□ 2.02
GGA2-204	ENST00000563047	RUNDC1	Q96C34	613 aa		27.7	■■■□□ 2.02
GGA2-204	ENST00000563047	FOXN1	O15353	648 aa		27.69	■■■□□ 2.02
GGA2-204	ENST00000563047	TMX4	Q9H1E5	349 aa	Predicted RBP	27.69	■■■□□ 2.02
GGA2-204	ENST00000563047	VPS33B	Q9H267	617 aa		27.69	■■■□□ 2.02
GGA2-204	ENST00000563047	LAS1L	Q9Y4W2	734 aa	Known RBP	27.69	■■■□□ 2.02
GGA2-204	ENST00000563047	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.68	■■■□□ 2.02
GGA2-204	ENST00000563047	TRMT112	Q9UI30	125 aa	Known RBP	27.68	■■■□□ 2.02
GGA2-204	ENST00000563047	BBOX1	O75936	387 aa		27.67	■■■□□ 2.02
GGA2-204	ENST00000563047	CHPF2	Q9P2E5	772 aa		27.67	■■■□□ 2.02
GGA2-204	ENST00000563047	RASSF10	A6NK89	507 aa		27.66	■■■□□ 2.02
GGA2-204	ENST00000563047	SP8	Q8IXZ3	490 aa		27.66	■■■□□ 2.02
GGA2-204	ENST00000563047	SH3TC1	Q8TE82	1336 aa		27.66	■■■□□ 2.02
GGA2-204	ENST00000563047	FMR1	Q06787	632 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
GGA2-204	ENST00000563047	WDR43	Q15061	677 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
GGA2-204	ENST00000563047	DEFB115	Q30KQ5	88 aa		27.65	■■■□□ 2.02
GGA2-204	ENST00000563047	SUPT20H	Q8NEM7	779 aa		27.65	■■■□□ 2.02
GGA2-204	ENST00000563047	ZNF428	Q96B54	188 aa		27.65	■■■□□ 2.02
GGA2-204	ENST00000563047	ADAMTS8	Q9UP79	889 aa		27.65	■■■□□ 2.02
GGA2-204	ENST00000563047	CXCL9	Q07325	125 aa		27.64	■■■□□ 2.02
GGA2-204	ENST00000563047	DPP8	Q6V1X1	898 aa	Predicted RBP	27.64	■■■□□ 2.02
GGA2-204	ENST00000563047	USP50	Q70EL3	339 aa	Predicted RBP	27.64	■■■□□ 2.02
GGA2-204	ENST00000563047	GRAP	Q13588	217 aa		27.63	■■■□□ 2.01
GGA2-204	ENST00000563047	HDGFL1	Q5TGJ6	251 aa		27.63	■■■□□ 2.01
GGA2-204	ENST00000563047	DDX46	Q7L014	1031 aa	Known RBP	27.63	■■■□□ 2.01
GGA2-204	ENST00000563047	MPND	Q8N594	471 aa		27.63	■■■□□ 2.01
GGA2-204	ENST00000563047	GRAPL	Q8TC17	118 aa	Predicted RBP	27.63	■■■□□ 2.01
GGA2-204	ENST00000563047	ZNRF3	Q9ULT6	936 aa		27.63	■■■□□ 2.01
GGA2-204	ENST00000563047	TAF1	P21675	1872 aa		27.63	■■■□□ 2.01

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