RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 FBXO33Q7Z6M2 555 aa14.19□□□□□ -0.14
MARK3-213ENST00000558611 DNMT3AQ9Y6K1 912 aaPredicted RBP14.19□□□□□ -0.14
MARK3-213ENST00000558611 SETD1AO15047 1707 aaKnown RBP14.18□□□□□ -0.14
MARK3-213ENST00000558611 ZSCAN29Q8IWY8 852 aaPredicted RBP14.18□□□□□ -0.14
MARK3-213ENST00000558611 MPHOSPH9Q99550 1183 aa14.18□□□□□ -0.14
MARK3-213ENST00000558611 SEPT3Q9UH03 358 aa14.18□□□□□ -0.14
MARK3-213ENST00000558611 MYCP01106 439 aaPredicted RBP14.17□□□□□ -0.14
MARK3-213ENST00000558611 TCF3P15923 654 aa14.17□□□□□ -0.14
MARK3-213ENST00000558611 TSEN2Q8NCE0 465 aaKnown RBP14.17□□□□□ -0.14
MARK3-213ENST00000558611 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.17□□□□□ -0.14
MARK3-213ENST00000558611 IL21Q9HBE4 155 aa14.17□□□□□ -0.14
MARK3-213ENST00000558611 USP35Q9P2H5 1018 aa14.17□□□□□ -0.14
MARK3-213ENST00000558611 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
MARK3-213ENST00000558611 LRRC7Q96NW7 1537 aa14.16□□□□□ -0.14
MARK3-213ENST00000558611 FKBP5Q13451 457 aaPredicted RBP14.16□□□□□ -0.14
MARK3-213ENST00000558611 NKTRP30414 1462 aaKnown RBP14.15□□□□□ -0.14
MARK3-213ENST00000558611 ARHGAP4P98171 946 aa14.15□□□□□ -0.14
MARK3-213ENST00000558611 MKNK1Q9BUB5 465 aa14.15□□□□□ -0.14
MARK3-213ENST00000558611 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
MARK3-213ENST00000558611 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
MARK3-213ENST00000558611 LGR5O75473 907 aa14.13□□□□□ -0.15
MARK3-213ENST00000558611 IGFBP4P22692 258 aa14.13□□□□□ -0.15
MARK3-213ENST00000558611 TJAP1Q5JTD0 557 aa14.13□□□□□ -0.15
MARK3-213ENST00000558611 SLC26A8Q96RN1 970 aa14.13□□□□□ -0.15
MARK3-213ENST00000558611 FCF1Q9Y324 198 aaKnown RBP14.13□□□□□ -0.15
MARK3-213ENST00000558611 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
MARK3-213ENST00000558611 FOXO3O43524 673 aa14.12□□□□□ -0.15
MARK3-213ENST00000558611 SH3BP2P78314 561 aa14.12□□□□□ -0.15
MARK3-213ENST00000558611 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.12□□□□□ -0.15
MARK3-213ENST00000558611 HELQQ8TDG4 1101 aa14.12□□□□□ -0.15
MARK3-213ENST00000558611 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
MARK3-213ENST00000558611 KCTD15Q96SI1 283 aaPredicted RBP14.12□□□□□ -0.15
MARK3-213ENST00000558611 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
MARK3-213ENST00000558611 ZNF358Q9NW07 568 aa14.12□□□□□ -0.15
MARK3-213ENST00000558611 SPATA31E1Q6ZUB1 1445 aa14.12□□□□□ -0.15
MARK3-213ENST00000558611 RGL4Q8IZJ4 473 aa14.11□□□□□ -0.15
MARK3-213ENST00000558611 NPR3P17342 541 aa14.1□□□□□ -0.15
MARK3-213ENST00000558611 ZNF516Q92618 1163 aa14.1□□□□□ -0.15
MARK3-213ENST00000558611 KCNA6P17658 529 aa14.09□□□□□ -0.15
MARK3-213ENST00000558611 CAPN12Q6ZSI9 719 aa14.09□□□□□ -0.15
MARK3-213ENST00000558611 PURBQ96QR8 312 aaKnown RBP14.09□□□□□ -0.15
MARK3-213ENST00000558611 TBX22Q9Y458 520 aa14.09□□□□□ -0.15
MARK3-213ENST00000558611 MAP4K5Q9Y4K4 846 aa14.09□□□□□ -0.15
MARK3-213ENST00000558611 PIK3R4Q99570 1358 aa14.09□□□□□ -0.15
MARK3-213ENST00000558611 FAM13AO94988 1023 aa14.08□□□□□ -0.16
MARK3-213ENST00000558611 S1PR4O95977 384 aa14.08□□□□□ -0.16
MARK3-213ENST00000558611 MTMR3Q13615 1198 aa14.08□□□□□ -0.16
MARK3-213ENST00000558611 RPGRIP1LQ68CZ1 1315 aa14.08□□□□□ -0.16
MARK3-213ENST00000558611 TMEM229AB2RXF0 380 aa14.07□□□□□ -0.16
MARK3-213ENST00000558611 WASLO00401 505 aaPredicted RBP14.07□□□□□ -0.16
MARK3-213ENST00000558611 KCTD12Q96CX2 325 aaKnown RBP14.07□□□□□ -0.16
MARK3-213ENST00000558611 LAMC1P11047 1609 aa14.07□□□□□ -0.16
MARK3-213ENST00000558611 ANKRD30BQ9BXX2 1392 aa14.07□□□□□ -0.16
MARK3-213ENST00000558611 UBAP1LF5GYI3 381 aa14.06□□□□□ -0.16
MARK3-213ENST00000558611 BACH1O14867 736 aa14.06□□□□□ -0.16
MARK3-213ENST00000558611 ERVK-9P63128 1117 aa14.06□□□□□ -0.16
MARK3-213ENST00000558611 EAPPQ56P03 285 aaPredicted RBP14.06□□□□□ -0.16
MARK3-213ENST00000558611 GAS2L2Q8NHY3 880 aa14.06□□□□□ -0.16
MARK3-213ENST00000558611 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.06□□□□□ -0.16
MARK3-213ENST00000558611 KNDC1Q76NI1 1749 aa14.05□□□□□ -0.16
MARK3-213ENST00000558611 SCTRP47872 440 aa14.05□□□□□ -0.16
MARK3-213ENST00000558611 TAGLNQ01995 201 aaKnown RBP14.05□□□□□ -0.16
MARK3-213ENST00000558611 INTS6LQ5JSJ4 861 aaKnown RBP14.05□□□□□ -0.16
MARK3-213ENST00000558611 C8orf37Q96NL8 207 aa14.05□□□□□ -0.16
MARK3-213ENST00000558611 RBCK1Q9BYM8 510 aa14.05□□□□□ -0.16
MARK3-213ENST00000558611 TMEM94Q12767 1356 aa14.05□□□□□ -0.16
MARK3-213ENST00000558611 PTPRUQ92729 1446 aa14.05□□□□□ -0.16
MARK3-213ENST00000558611 NALCNQ8IZF0 1738 aa14.04□□□□□ -0.16
MARK3-213ENST00000558611 ERVH48-1M5A8F1 160 aa14.04□□□□□ -0.16
MARK3-213ENST00000558611 VARSP26640 1264 aaKnown RBP14.04□□□□□ -0.16
MARK3-213ENST00000558611 RAB15P59190 212 aa14.04□□□□□ -0.16
MARK3-213ENST00000558611 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
MARK3-213ENST00000558611 NAA30Q147X3 362 aaPredicted RBP14.03□□□□□ -0.16
MARK3-213ENST00000558611 METP08581 1390 aa14.03□□□□□ -0.16
MARK3-213ENST00000558611 MYOM2P54296 1465 aa14.03□□□□□ -0.16
MARK3-213ENST00000558611 TOM1O60784 492 aa14.02□□□□□ -0.17
MARK3-213ENST00000558611 RECKO95980 971 aa14.02□□□□□ -0.17
MARK3-213ENST00000558611 SCNN1DP51172 638 aa14.02□□□□□ -0.17
MARK3-213ENST00000558611 RGL3Q3MIN7 710 aa14.02□□□□□ -0.17
MARK3-213ENST00000558611 VASH1Q7L8A9 365 aaPredicted RBP14.02□□□□□ -0.17
MARK3-213ENST00000558611 SCG3Q8WXD2 468 aaKnown RBP14.02□□□□□ -0.17
MARK3-213ENST00000558611 ROBO1Q9Y6N7 1651 aa14.01□□□□□ -0.17
MARK3-213ENST00000558611 PIK3C2GO75747 1445 aa14.01□□□□□ -0.17
MARK3-213ENST00000558611 GDF10P55107 478 aa14.01□□□□□ -0.17
MARK3-213ENST00000558611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.01□□□□□ -0.17
MARK3-213ENST00000558611 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
MARK3-213ENST00000558611 NRXN1Q9ULB1 1477 aa14□□□□□ -0.17
MARK3-213ENST00000558611 NCOA3Q9Y6Q9 1424 aa14□□□□□ -0.17
MARK3-213ENST00000558611 ATAD2Q6PL18 1390 aa14□□□□□ -0.17
MARK3-213ENST00000558611 OSBPL3Q9H4L5 887 aa14□□□□□ -0.17
MARK3-213ENST00000558611 PRAG1Q86YV5 1406 aa13.99□□□□□ -0.17
MARK3-213ENST00000558611 ADGRF5Q8IZF2 1346 aa13.99□□□□□ -0.17
MARK3-213ENST00000558611 ZBTB24O43167 697 aaPredicted RBP13.99□□□□□ -0.17
MARK3-213ENST00000558611 EPHA4P54764 986 aa13.99□□□□□ -0.17
MARK3-213ENST00000558611 WNT7BP56706 349 aa13.99□□□□□ -0.17
MARK3-213ENST00000558611 NKX2-3Q8TAU0 364 aa13.99□□□□□ -0.17
MARK3-213ENST00000558611 VTI1AQ96AJ9 217 aa13.99□□□□□ -0.17
MARK3-213ENST00000558611 CITED4Q96RK1 184 aa13.99□□□□□ -0.17
MARK3-213ENST00000558611 PTCH1Q13635 1447 aa13.98□□□□□ -0.17
MARK3-213ENST00000558611 MSH6P52701 1360 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms