RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
RDH11-211ENST00000557726 HACL1Q9UJ83 578 aa16.76■□□□□ 0.27
RDH11-211ENST00000557726 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
RDH11-211ENST00000557726 HOXA10P31260 410 aaPredicted RBP16.75■□□□□ 0.27
RDH11-211ENST00000557726 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
RDH11-211ENST00000557726 NEUROD2Q15784 382 aa16.75■□□□□ 0.27
RDH11-211ENST00000557726 COL13A1Q5TAT6 717 aaPredicted RBP16.75■□□□□ 0.27
RDH11-211ENST00000557726 NECTIN2Q92692 538 aa16.75■□□□□ 0.27
RDH11-211ENST00000557726 PSMD1Q99460 953 aa16.75■□□□□ 0.27
RDH11-211ENST00000557726 BABAM1Q9NWV8 329 aa16.75■□□□□ 0.27
RDH11-211ENST00000557726 RIC1Q4ADV7 1423 aa16.74■□□□□ 0.27
RDH11-211ENST00000557726 FZD9O00144 591 aa16.74■□□□□ 0.27
RDH11-211ENST00000557726 NTSR2O95665 410 aa16.74■□□□□ 0.27
RDH11-211ENST00000557726 ANXA1P04083 346 aa16.74■□□□□ 0.27
RDH11-211ENST00000557726 HSPA1AP0DMV8 641 aaKnown RBP16.74■□□□□ 0.27
RDH11-211ENST00000557726 HSPA1BP0DMV9 641 aaKnown RBP16.74■□□□□ 0.27
RDH11-211ENST00000557726 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
RDH11-211ENST00000557726 NLRP3Q96P20 1036 aa16.74■□□□□ 0.27
RDH11-211ENST00000557726 TMX4Q9H1E5 349 aaPredicted RBP16.74■□□□□ 0.27
RDH11-211ENST00000557726 MKRN1Q9UHC7 482 aaKnown RBP16.74■□□□□ 0.27
RDH11-211ENST00000557726 MYBBP1AQ9BQG0 1328 aaKnown RBP16.73■□□□□ 0.27
RDH11-211ENST00000557726 PPEF1O14829 653 aaPredicted RBP16.73■□□□□ 0.27
RDH11-211ENST00000557726 EPHX2P34913 555 aa16.73■□□□□ 0.27
RDH11-211ENST00000557726 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
RDH11-211ENST00000557726 AIMP1Q12904 312 aaKnown RBP16.73■□□□□ 0.27
RDH11-211ENST00000557726 PDIA6Q15084 440 aa16.73■□□□□ 0.27
RDH11-211ENST00000557726 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
RDH11-211ENST00000557726 GRIPAP1Q4V328 841 aa16.73■□□□□ 0.27
RDH11-211ENST00000557726 CRAMP1Q96RY5 1269 aa16.73■□□□□ 0.27
RDH11-211ENST00000557726 UTP14AQ9BVJ6 771 aaKnown RBP16.73■□□□□ 0.27
RDH11-211ENST00000557726 LAS1LQ9Y4W2 734 aaKnown RBP16.73■□□□□ 0.27
RDH11-211ENST00000557726 RNF123Q5XPI4 1314 aa16.72■□□□□ 0.27
RDH11-211ENST00000557726 WDR43Q15061 677 aaKnown RBP eCLIP16.72■□□□□ 0.27
RDH11-211ENST00000557726 PNMA8AQ86V59 439 aaPredicted RBP16.72■□□□□ 0.27
RDH11-211ENST00000557726 GPC2Q8N158 579 aa16.72■□□□□ 0.27
RDH11-211ENST00000557726 LARGE2Q8N3Y3 721 aa16.72■□□□□ 0.27
RDH11-211ENST00000557726 GJA3Q9Y6H8 435 aa16.72■□□□□ 0.27
RDH11-211ENST00000557726 C3orf67Q6ZVT6 689 aa16.71■□□□□ 0.27
RDH11-211ENST00000557726 COPS6Q7L5N1 327 aa16.71■□□□□ 0.27
RDH11-211ENST00000557726 LRP10Q7Z4F1 713 aa16.71■□□□□ 0.27
RDH11-211ENST00000557726 LMOD1P29536 600 aaPredicted RBP16.7■□□□□ 0.26
RDH11-211ENST00000557726 HSP90AB3PQ58FF7 597 aa16.7■□□□□ 0.26
RDH11-211ENST00000557726 TNS4Q8IZW8 715 aa16.7■□□□□ 0.26
RDH11-211ENST00000557726 XAGE3Q8WTP9 111 aa16.7■□□□□ 0.26
RDH11-211ENST00000557726 RUNDC1Q96C34 613 aa16.7■□□□□ 0.26
RDH11-211ENST00000557726 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
RDH11-211ENST00000557726 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
RDH11-211ENST00000557726 ANKRD36CQ5JPF3 1778 aa16.69■□□□□ 0.26
RDH11-211ENST00000557726 TMEM88BA6NKF7 163 aa16.69■□□□□ 0.26
RDH11-211ENST00000557726 NIM1KQ8IY84 436 aa16.69■□□□□ 0.26
RDH11-211ENST00000557726 PPIP5K2O43314 1243 aa16.68■□□□□ 0.26
RDH11-211ENST00000557726 ITGBL1O95965 494 aaPredicted RBP16.68■□□□□ 0.26
RDH11-211ENST00000557726 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
RDH11-211ENST00000557726 MAP1SQ66K74 1059 aaPredicted RBP16.68■□□□□ 0.26
RDH11-211ENST00000557726 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
RDH11-211ENST00000557726 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
RDH11-211ENST00000557726 CHL1O00533 1208 aa16.67■□□□□ 0.26
RDH11-211ENST00000557726 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
RDH11-211ENST00000557726 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
RDH11-211ENST00000557726 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
RDH11-211ENST00000557726 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
RDH11-211ENST00000557726 TRMT112Q9UI30 125 aaKnown RBP16.67■□□□□ 0.26
RDH11-211ENST00000557726 ATP6V0A2Q9Y487 856 aa16.67■□□□□ 0.26
RDH11-211ENST00000557726 ABCC4O15439 1325 aa16.67■□□□□ 0.26
RDH11-211ENST00000557726 CNTNAP1P78357 1384 aa16.66■□□□□ 0.26
RDH11-211ENST00000557726 COL4A5P29400 1685 aa16.66■□□□□ 0.26
RDH11-211ENST00000557726 CAPN15O75808 1086 aa16.66■□□□□ 0.26
RDH11-211ENST00000557726 TCIRG1Q13488 830 aa16.66■□□□□ 0.26
RDH11-211ENST00000557726 SUPT20HQ8NEM7 779 aa16.66■□□□□ 0.26
RDH11-211ENST00000557726 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
RDH11-211ENST00000557726 LAMB2P55268 1798 aa16.66■□□□□ 0.26
RDH11-211ENST00000557726 ADAMTSL1Q8N6G6 1762 aa16.66■□□□□ 0.26
RDH11-211ENST00000557726 BBOX1O75936 387 aa16.65■□□□□ 0.26
RDH11-211ENST00000557726 AOC3Q16853 763 aa16.65■□□□□ 0.26
RDH11-211ENST00000557726 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
RDH11-211ENST00000557726 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
RDH11-211ENST00000557726 CHPF2Q9P2E5 772 aa16.65■□□□□ 0.26
RDH11-211ENST00000557726 SH3TC1Q8TE82 1336 aa16.65■□□□□ 0.26
RDH11-211ENST00000557726 EPS15P42566 896 aa16.64■□□□□ 0.25
RDH11-211ENST00000557726 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
RDH11-211ENST00000557726 ZNF428Q96B54 188 aa16.64■□□□□ 0.25
RDH11-211ENST00000557726 VPS33BQ9H267 617 aa16.64■□□□□ 0.25
RDH11-211ENST00000557726 ADAMTS8Q9UP79 889 aa16.64■□□□□ 0.25
RDH11-211ENST00000557726 VEGFBP49765 207 aa16.63■□□□□ 0.25
RDH11-211ENST00000557726 SCNN1DP51172 638 aa16.63■□□□□ 0.25
RDH11-211ENST00000557726 SP8Q8IXZ3 490 aa16.63■□□□□ 0.25
RDH11-211ENST00000557726 MPNDQ8N594 471 aa16.63■□□□□ 0.25
RDH11-211ENST00000557726 ABT1Q9ULW3 272 aaKnown RBP16.63■□□□□ 0.25
RDH11-211ENST00000557726 TAF1P21675 1872 aa16.63■□□□□ 0.25
RDH11-211ENST00000557726 HOXB7P09629 217 aa16.62■□□□□ 0.25
RDH11-211ENST00000557726 GRAPQ13588 217 aa16.62■□□□□ 0.25
RDH11-211ENST00000557726 DEFB115Q30KQ5 88 aa16.62■□□□□ 0.25
RDH11-211ENST00000557726 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
RDH11-211ENST00000557726 PLBD2Q8NHP8 589 aa16.62■□□□□ 0.25
RDH11-211ENST00000557726 GRAPLQ8TC17 118 aaPredicted RBP16.62■□□□□ 0.25
RDH11-211ENST00000557726 AIDAQ96BJ3 306 aa16.62■□□□□ 0.25
RDH11-211ENST00000557726 DBF4Q9UBU7 674 aaPredicted RBP16.62■□□□□ 0.25
RDH11-211ENST00000557726 ZNRF3Q9ULT6 936 aa16.62■□□□□ 0.25
RDH11-211ENST00000557726 LTBP1Q14766 1721 aa16.62■□□□□ 0.25
RDH11-211ENST00000557726 USP50Q70EL3 339 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms