RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 YTHDC2Q9H6S0 1430 aaKnown RBP7.18□□□□□ -1.26
ATXN3-247ENST00000557311 EVA1CP58658 441 aa7.17□□□□□ -1.26
ATXN3-247ENST00000557311 INSM1Q01101 510 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-247ENST00000557311 SAFB2Q14151 953 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-247ENST00000557311 BANK1Q8NDB2 785 aa7.17□□□□□ -1.26
ATXN3-247ENST00000557311 GPKOWQ92917 476 aaPredicted RBP eCLIP7.17□□□□□ -1.26
ATXN3-247ENST00000557311 SNRKQ9NRH2 765 aa7.17□□□□□ -1.26
ATXN3-247ENST00000557311 NINLQ9Y2I6 1382 aa7.17□□□□□ -1.26
ATXN3-247ENST00000557311 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
ATXN3-247ENST00000557311 NRXN1Q9ULB1 1477 aa7.17□□□□□ -1.26
ATXN3-247ENST00000557311 CFAP70Q5T0N1 1121 aa7.16□□□□□ -1.26
ATXN3-247ENST00000557311 VASH1Q7L8A9 365 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-247ENST00000557311 PPARGC1BQ86YN6 1023 aaKnown RBP7.16□□□□□ -1.26
ATXN3-247ENST00000557311 ZNF784Q8NCA9 323 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-247ENST00000557311 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
ATXN3-247ENST00000557311 KIFC2Q96AC6 838 aa7.16□□□□□ -1.26
ATXN3-247ENST00000557311 STRN4Q9NRL3 753 aa7.16□□□□□ -1.26
ATXN3-247ENST00000557311 ACIN1Q9UKV3 1341 aaKnown RBP7.16□□□□□ -1.26
ATXN3-247ENST00000557311 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-247ENST00000557311 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
ATXN3-247ENST00000557311 PDXDC2PQ6P474 469 aa7.15□□□□□ -1.26
ATXN3-247ENST00000557311 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.26
ATXN3-247ENST00000557311 SLC10A4Q96EP9 437 aa7.15□□□□□ -1.26
ATXN3-247ENST00000557311 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
ATXN3-247ENST00000557311 ZC3H4Q9UPT8 1303 aaKnown RBP7.15□□□□□ -1.26
ATXN3-247ENST00000557311 ANKARQ7Z5J8 1434 aa7.15□□□□□ -1.27
ATXN3-247ENST00000557311 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
ATXN3-247ENST00000557311 BRWD3Q6RI45 1802 aa7.15□□□□□ -1.27
ATXN3-247ENST00000557311 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 WASLO00401 505 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-247ENST00000557311 PLSCR1O15162 318 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 CAPN5O15484 640 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-247ENST00000557311 VEGFBP49765 207 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 RAB15P59190 212 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 C1QTNF8P60827 252 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
ATXN3-247ENST00000557311 TMEM132AQ24JP5 1023 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 SPATA31E1Q6ZUB1 1445 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 BCL11AQ9H165 835 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 THRAP3Q9Y2W1 955 aaKnown RBP7.14□□□□□ -1.27
ATXN3-247ENST00000557311 NDUFB9Q9Y6M9 179 aa7.14□□□□□ -1.27
ATXN3-247ENST00000557311 NWD2Q9ULI1 1742 aa7.13□□□□□ -1.27
ATXN3-247ENST00000557311 KIF1AQ12756 1690 aa7.13□□□□□ -1.27
ATXN3-247ENST00000557311 PIK3C2GO75747 1445 aa7.13□□□□□ -1.27
ATXN3-247ENST00000557311 EIF3AQ14152 1382 aaKnown RBP7.13□□□□□ -1.27
ATXN3-247ENST00000557311 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
ATXN3-247ENST00000557311 GMPRP36959 345 aa7.13□□□□□ -1.27
ATXN3-247ENST00000557311 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
ATXN3-247ENST00000557311 SH3BP5LQ7L8J4 393 aa7.13□□□□□ -1.27
ATXN3-247ENST00000557311 DZIP3Q86Y13 1208 aaKnown RBP7.13□□□□□ -1.27
ATXN3-247ENST00000557311 HIRIP3Q9BW71 556 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-247ENST00000557311 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 FSHRP23945 695 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 NNTQ13423 1086 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 ERFEQ4G0M1 354 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 LARP1Q6PKG0 1096 aaKnown RBP7.12□□□□□ -1.27
ATXN3-247ENST00000557311 MTMR14Q8NCE2 650 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 ADAM32Q8TC27 787 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 SYT17Q9BSW7 474 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 TRIM34Q9BYJ4 488 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
ATXN3-247ENST00000557311 TRAK1Q9UPV9 953 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 PCDHB9Q9Y5E1 797 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 KIF1BO60333 1816 aa7.12□□□□□ -1.27
ATXN3-247ENST00000557311 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
ATXN3-247ENST00000557311 ADH1CP00326 375 aa7.11□□□□□ -1.27
ATXN3-247ENST00000557311 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
ATXN3-247ENST00000557311 NUDT16Q96DE0 195 aaKnown RBP7.11□□□□□ -1.27
ATXN3-247ENST00000557311 FMN2Q9NZ56 1722 aa7.1□□□□□ -1.27
ATXN3-247ENST00000557311 ZBBXA8MT70 800 aa7.1□□□□□ -1.27
ATXN3-247ENST00000557311 ABL2P42684 1182 aa7.1□□□□□ -1.27
ATXN3-247ENST00000557311 WDR4P57081 412 aaKnown RBP7.1□□□□□ -1.27
ATXN3-247ENST00000557311 ZFP42Q96MM3 310 aa7.1□□□□□ -1.27
ATXN3-247ENST00000557311 ZNF330Q9Y3S2 320 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-247ENST00000557311 GPSM3Q9Y4H4 160 aa7.1□□□□□ -1.27
ATXN3-247ENST00000557311 ADGRB2O60241 1585 aa7.1□□□□□ -1.27
ATXN3-247ENST00000557311 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
ATXN3-247ENST00000557311 ERBB4Q15303 1308 aa7.09□□□□□ -1.27
ATXN3-247ENST00000557311 NR5A1Q13285 461 aa7.09□□□□□ -1.27
ATXN3-247ENST00000557311 SH3RF1Q7Z6J0 888 aa7.09□□□□□ -1.27
ATXN3-247ENST00000557311 ABTB2Q8N961 1025 aa7.09□□□□□ -1.27
ATXN3-247ENST00000557311 FHDC1Q9C0D6 1143 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-247ENST00000557311 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-247ENST00000557311 STK32BQ9NY57 414 aa7.09□□□□□ -1.27
ATXN3-247ENST00000557311 COL14A1Q05707 1796 aaKnown RBP7.09□□□□□ -1.27
ATXN3-247ENST00000557311 PLCH1Q4KWH8 1693 aa7.09□□□□□ -1.27
ATXN3-247ENST00000557311 THSD7AQ9UPZ6 1657 aa7.09□□□□□ -1.27
ATXN3-247ENST00000557311 SSH2Q76I76 1423 aa7.09□□□□□ -1.28
ATXN3-247ENST00000557311 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
ATXN3-247ENST00000557311 GCP02774 474 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 SLC15A2Q16348 729 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 DDB1Q16531 1140 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 NLRP13Q86W25 1043 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 SLC16A10Q8TF71 515 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 KCTD15Q96SI1 283 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-247ENST00000557311 C1QTNF2Q9BXJ5 285 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 MTFR1LQ9H019 292 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 GDPD2Q9HCC8 539 aa7.08□□□□□ -1.28
ATXN3-247ENST00000557311 CDV3Q9UKY7 258 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms