RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SFSWAPQ12872 951 aaKnown RBP7.86□□□□□ -1.15
ATXN3-243ENST00000556671 PTK7Q13308 1070 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 CRTC2Q53ET0 693 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-243ENST00000556671 LARP1Q6PKG0 1096 aaKnown RBP7.86□□□□□ -1.15
ATXN3-243ENST00000556671 GAS2L2Q8NHY3 880 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 MDFIQ99750 246 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 SUV39H2Q9H5I1 410 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 PBRM1Q86U86 1689 aa7.86□□□□□ -1.15
ATXN3-243ENST00000556671 BIVM-ERCC5R4GMW8 1640 aa7.85□□□□□ -1.15
ATXN3-243ENST00000556671 PROCP04070 461 aa7.85□□□□□ -1.15
ATXN3-243ENST00000556671 GRIN2CQ14957 1233 aa7.85□□□□□ -1.15
ATXN3-243ENST00000556671 SYT9Q86SS6 491 aa7.85□□□□□ -1.15
ATXN3-243ENST00000556671 HSH2DQ96JZ2 352 aa7.85□□□□□ -1.15
ATXN3-243ENST00000556671 SPOCK3Q9BQ16 436 aa7.85□□□□□ -1.15
ATXN3-243ENST00000556671 C2orf49Q9BVC5 232 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-243ENST00000556671 ANKIB1Q9P2G1 1089 aa7.85□□□□□ -1.15
ATXN3-243ENST00000556671 TOP2BQ02880 1626 aa7.85□□□□□ -1.15
ATXN3-243ENST00000556671 FAM196BA6NMK8 535 aa7.84□□□□□ -1.15
ATXN3-243ENST00000556671 DPYDQ12882 1025 aa7.84□□□□□ -1.15
ATXN3-243ENST00000556671 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
ATXN3-243ENST00000556671 ZNF280CQ8ND82 737 aa7.84□□□□□ -1.15
ATXN3-243ENST00000556671 SCG3Q8WXD2 468 aaKnown RBP7.84□□□□□ -1.15
ATXN3-243ENST00000556671 SUSD3Q96L08 255 aa7.84□□□□□ -1.15
ATXN3-243ENST00000556671 SLC30A3Q99726 388 aa7.84□□□□□ -1.15
ATXN3-243ENST00000556671 ELOA3CA0A087WX78 387 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-243ENST00000556671 ELOA3DA6NLF2 546 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L15C9J2P7 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L10C9JJH3 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L13C9JLJ4 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L12C9JPN9 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L11C9JVI0 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L21D6R901 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L18D6R9N7 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L22D6RA61 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L17D6RBQ6 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L19D6RCP7 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L20D6RJB6 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 SIN3BO75182 1162 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 LMOD1P29536 600 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-243ENST00000556671 KCNQ4P56696 695 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 USP17L24Q0WX57 530 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 ELOA3BQ3SY89 546 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 ELOA3Q8NG57 546 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 CHMP7Q8WUX9 453 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-243ENST00000556671 CEP63Q96MT8 703 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 BRD7Q9NPI1 651 aa7.83□□□□□ -1.16
ATXN3-243ENST00000556671 WDR97A6NE52 1622 aa7.82□□□□□ -1.16
ATXN3-243ENST00000556671 LOC100996750A0A140TA64 210 aa7.82□□□□□ -1.16
ATXN3-243ENST00000556671 ADARB2-AS1A8MUL3 147 aa7.82□□□□□ -1.16
ATXN3-243ENST00000556671 TYRO3Q06418 890 aa7.82□□□□□ -1.16
ATXN3-243ENST00000556671 ANKMY2Q8IV38 441 aa7.82□□□□□ -1.16
ATXN3-243ENST00000556671 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
ATXN3-243ENST00000556671 VRTNQ9H8Y1 702 aa7.82□□□□□ -1.16
ATXN3-243ENST00000556671 NOP53Q9NZM5 478 aaKnown RBP7.82□□□□□ -1.16
ATXN3-243ENST00000556671 IGFBP4P22692 258 aa7.81□□□□□ -1.16
ATXN3-243ENST00000556671 SPEM2Q0P670 501 aa7.81□□□□□ -1.16
ATXN3-243ENST00000556671 CFAP70Q5T0N1 1121 aa7.81□□□□□ -1.16
ATXN3-243ENST00000556671 TNFRSF25Q93038 417 aa7.81□□□□□ -1.16
ATXN3-243ENST00000556671 HINFPQ9BQA5 517 aa7.81□□□□□ -1.16
ATXN3-243ENST00000556671 ALAS2P22557 587 aa7.8□□□□□ -1.16
ATXN3-243ENST00000556671 HIF1AQ16665 826 aa7.8□□□□□ -1.16
ATXN3-243ENST00000556671 ARXQ96QS3 562 aa7.8□□□□□ -1.16
ATXN3-243ENST00000556671 KCNH4Q9UQ05 1017 aa7.8□□□□□ -1.16
ATXN3-243ENST00000556671 GAPVD1Q14C86 1478 aa7.8□□□□□ -1.16
ATXN3-243ENST00000556671 BTLAQ7Z6A9 289 aa7.79□□□□□ -1.16
ATXN3-243ENST00000556671 TRIM11Q96F44 468 aa7.79□□□□□ -1.16
ATXN3-243ENST00000556671 NGLY1Q96IV0 654 aa7.79□□□□□ -1.16
ATXN3-243ENST00000556671 ZNF777Q9ULD5 760 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-243ENST00000556671 LGR5O75473 907 aa7.78□□□□□ -1.16
ATXN3-243ENST00000556671 NEUROD1Q13562 356 aa7.78□□□□□ -1.16
ATXN3-243ENST00000556671 RTN1Q16799 776 aa7.78□□□□□ -1.16
ATXN3-243ENST00000556671 IER5Q5VY09 327 aa7.78□□□□□ -1.16
ATXN3-243ENST00000556671 RAB44Q7Z6P3 723 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-243ENST00000556671 GRIN2BQ13224 1484 aa7.77□□□□□ -1.17
ATXN3-243ENST00000556671 SNAPC4Q5SXM2 1469 aa7.77□□□□□ -1.17
ATXN3-243ENST00000556671 STARD13Q9Y3M8 1113 aa7.77□□□□□ -1.17
ATXN3-243ENST00000556671 ABCA10Q8WWZ4 1543 aa7.77□□□□□ -1.17
ATXN3-243ENST00000556671 TGFBR3LH3BV60 316 aa7.76□□□□□ -1.17
ATXN3-243ENST00000556671 WEE1P30291 646 aa7.76□□□□□ -1.17
ATXN3-243ENST00000556671 ADH7P40394 386 aa7.76□□□□□ -1.17
ATXN3-243ENST00000556671 PLVAPQ9BX97 442 aa7.76□□□□□ -1.17
ATXN3-243ENST00000556671 DMGDHQ9UI17 866 aaKnown RBP7.76□□□□□ -1.17
ATXN3-243ENST00000556671 BCS1LQ9Y276 419 aa7.76□□□□□ -1.17
ATXN3-243ENST00000556671 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
ATXN3-243ENST00000556671 C1QTNF9BB2RNN3 333 aa7.75□□□□□ -1.17
ATXN3-243ENST00000556671 ADAM23O75077 832 aa7.75□□□□□ -1.17
ATXN3-243ENST00000556671 BAG6P46379 1132 aa7.75□□□□□ -1.17
ATXN3-243ENST00000556671 COL9A3Q14050 684 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-243ENST00000556671 CD163Q86VB7 1156 aa7.75□□□□□ -1.17
ATXN3-243ENST00000556671 PRDM6Q9NQX0 595 aa7.75□□□□□ -1.17
ATXN3-243ENST00000556671 M0R082 166 aa7.74□□□□□ -1.17
ATXN3-243ENST00000556671 FOXO3O43524 673 aa7.74□□□□□ -1.17
ATXN3-243ENST00000556671 CHRNA4P43681 627 aa7.74□□□□□ -1.17
ATXN3-243ENST00000556671 MICALL1Q8N3F8 863 aa7.74□□□□□ -1.17
ATXN3-243ENST00000556671 ZNF417Q8TAU3 575 aa7.74□□□□□ -1.17
ATXN3-243ENST00000556671 BHMTQ93088 406 aa7.74□□□□□ -1.17
ATXN3-243ENST00000556671 ZNF587Q96SQ5 575 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-243ENST00000556671 EFCC1Q9HA90 598 aa7.74□□□□□ -1.17
ATXN3-243ENST00000556671 ALBP02768 609 aa7.73□□□□□ -1.17
ATXN3-243ENST00000556671 SPATA31C1P0DKV0 1188 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms