RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 HPS1Q92902 700 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 NEUROD4Q9HD90 331 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 TOR4AQ9NXH8 423 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 ANKIB1Q9P2G1 1089 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 SPG7Q9UQ90 795 aa6.32□□□□□ -1.4
SPTLC2-204ENST00000556264 SPATA31C2B4DYI2 1134 aa6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 EIF4BP23588 611 aaKnown RBP6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 IER5Q5VY09 327 aa6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 PRICKLE2Q7Z3G6 844 aa6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 CMTR1Q8N1G2 835 aaKnown RBP6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 UBXN4Q92575 508 aa6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 CRELD1Q96HD1 420 aa6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 CCSER2Q9H7U1 834 aa6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 FOXD3Q9UJU5 478 aaPredicted RBP6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 RTCBQ9Y3I0 505 aaKnown RBP6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 GPC6Q9Y625 555 aaPredicted RBP6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 V9GY48 417 aaPredicted RBP6.31□□□□□ -1.4
SPTLC2-204ENST00000556264 TNFRSF21O75509 655 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 UPP2O95045 317 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 INPP5BP32019 993 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 ARSDP51689 593 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 NBPF10Q6P3W6 841 aaKnown RBP6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 XKR5Q6UX68 686 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 PI16Q6UXB8 463 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 ZNF438Q7Z4V0 828 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 BTLAQ7Z6A9 289 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 EPS8L3Q8TE67 593 aaKnown RBP6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 CCDC74AQ96AQ1 378 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 ZIC5Q96T25 663 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 CAPN10Q9HC96 672 aa6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 FNDC3AQ9Y2H6 1198 aaKnown RBP6.3□□□□□ -1.4
SPTLC2-204ENST00000556264 UBAP1LF5GYI3 381 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 IRS1P35568 1242 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 TRIP4Q15650 581 aaPredicted RBP6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 ARSJQ5FYB0 599 aaPredicted RBP6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 LRRC69Q6ZNQ3 347 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 TINF2Q9BSI4 451 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 OSBPL7Q9BZF2 842 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 TANGO6Q9C0B7 1094 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 ELP3Q9H9T3 547 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 ZFYVE28Q9HCC9 887 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 NLRP2Q9NX02 1062 aa6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.29□□□□□ -1.4
SPTLC2-204ENST00000556264 A0A0G2JS52 829 aa6.28□□□□□ -1.4
SPTLC2-204ENST00000556264 CAPN5O15484 640 aaPredicted RBP6.28□□□□□ -1.4
SPTLC2-204ENST00000556264 BMP2P12643 396 aa6.28□□□□□ -1.4
SPTLC2-204ENST00000556264 ATP4AP20648 1035 aa6.28□□□□□ -1.4
SPTLC2-204ENST00000556264 C6orf118Q5T5N4 469 aa6.28□□□□□ -1.4
SPTLC2-204ENST00000556264 PDE12Q6L8Q7 609 aaKnown RBP6.28□□□□□ -1.4
SPTLC2-204ENST00000556264 SNX29Q8TEQ0 813 aa6.28□□□□□ -1.4
SPTLC2-204ENST00000556264 KCNMB2Q9Y691 235 aa6.28□□□□□ -1.4
SPTLC2-204ENST00000556264 GIPC1O14908 333 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 PHACTR2O75167 634 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 POLR3DP05423 398 aaPredicted RBP6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 RHOQP17081 205 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 MSX1P28360 303 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 TNNI2P48788 182 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 WDR44Q5JSH3 913 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 LYSMD3Q7Z3D4 306 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 FAM177A1Q8N128 213 aaPredicted RBP6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 SLC43A3Q8NBI5 491 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 RNF217Q8TC41 542 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 C12orf49Q9H741 205 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 TIMMDC1Q9NPL8 285 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 TMEM63CQ9P1W3 806 aa6.27□□□□□ -1.41
SPTLC2-204ENST00000556264 A0A1W2PNR3 127 aa6.26□□□□□ -1.41
SPTLC2-204ENST00000556264 ZNF394Q53GI3 561 aa6.26□□□□□ -1.41
SPTLC2-204ENST00000556264 CEP63Q96MT8 703 aa6.26□□□□□ -1.41
SPTLC2-204ENST00000556264 PRKAG2Q9UGJ0 569 aa6.26□□□□□ -1.41
SPTLC2-204ENST00000556264 DDX41Q9UJV9 622 aaKnown RBP6.26□□□□□ -1.41
SPTLC2-204ENST00000556264 PCDHGB7Q9Y5F8 929 aa6.26□□□□□ -1.41
SPTLC2-204ENST00000556264 A0A1B0GTH6 734 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 XYLBO75191 536 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 GADD45BO75293 160 aaPredicted RBP6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 GRNP28799 593 aaKnown RBP6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 RACK1P63244 317 aaKnown RBP6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 GNL2Q13823 731 aaKnown RBP6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 MEI1Q5TIA1 1274 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 NXPE4Q6UWF7 544 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 TRIM67Q6ZTA4 783 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 USP48Q86UV5 1035 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 ZNF654Q8IZM8 581 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 PLA2G2EQ9NZK7 142 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 CNTN3Q9P232 1028 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 GGT7Q9UJ14 662 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 GJA3Q9Y6H8 435 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 USP31Q70CQ4 1352 aa6.25□□□□□ -1.41
SPTLC2-204ENST00000556264 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 TTLL8A6PVC2 850 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 EREGO14944 169 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 EPB42P16452 691 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 ATP2B1P20020 1258 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 PRR20EP86478 221 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 PRR20CP86479 221 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 PRR20DP86480 221 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 PRR20BP86481 221 aa6.24□□□□□ -1.41
SPTLC2-204ENST00000556264 PRR20AP86496 221 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms