RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
SPTLC2-204ENST00000556264 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
SPTLC2-204ENST00000556264 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
SPTLC2-204ENST00000556264 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-204ENST00000556264 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
SPTLC2-204ENST00000556264 ADRA2BP18089 450 aa12.27□□□□□ -0.45
SPTLC2-204ENST00000556264 FOXD1Q16676 465 aa12.21□□□□□ -0.45
SPTLC2-204ENST00000556264 PPP6R1Q9UPN7 881 aa12.19□□□□□ -0.46
SPTLC2-204ENST00000556264 KCNA4P22459 653 aa11.95□□□□□ -0.5
SPTLC2-204ENST00000556264 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
SPTLC2-204ENST00000556264 PIAS4Q8N2W9 510 aaPredicted RBP11.64□□□□□ -0.55
SPTLC2-204ENST00000556264 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
SPTLC2-204ENST00000556264 SLC4A1APQ9BWU0 796 aaKnown RBP11.46□□□□□ -0.57
SPTLC2-204ENST00000556264 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
SPTLC2-204ENST00000556264 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
SPTLC2-204ENST00000556264 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
SPTLC2-204ENST00000556264 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
SPTLC2-204ENST00000556264 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-204ENST00000556264 MSH5O43196 834 aa11.01□□□□□ -0.65
SPTLC2-204ENST00000556264 ZBTB22O15209 634 aa11□□□□□ -0.65
SPTLC2-204ENST00000556264 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
SPTLC2-204ENST00000556264 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
SPTLC2-204ENST00000556264 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
SPTLC2-204ENST00000556264 RNF216Q9NWF9 866 aaPredicted RBP10.79□□□□□ -0.68
SPTLC2-204ENST00000556264 DMRT2Q9Y5R5 561 aa10.62□□□□□ -0.71
SPTLC2-204ENST00000556264 HOXD11P31277 338 aaPredicted RBP10.6□□□□□ -0.71
SPTLC2-204ENST00000556264 SLC4A2P04920 1241 aa10.53□□□□□ -0.72
SPTLC2-204ENST00000556264 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
SPTLC2-204ENST00000556264 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
SPTLC2-204ENST00000556264 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
SPTLC2-204ENST00000556264 FKBP8Q14318 412 aa10.25□□□□□ -0.77
SPTLC2-204ENST00000556264 AMER1Q5JTC6 1135 aaPredicted RBP10.24□□□□□ -0.77
SPTLC2-204ENST00000556264 DCAF8L1A6NGE4 600 aa10.18□□□□□ -0.78
SPTLC2-204ENST00000556264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPTLC2-204ENST00000556264 SLC24A1O60721 1099 aa10.12□□□□□ -0.79
SPTLC2-204ENST00000556264 ATF5Q9Y2D1 282 aaPredicted RBP10.12□□□□□ -0.79
SPTLC2-204ENST00000556264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.04□□□□□ -0.8
SPTLC2-204ENST00000556264 HNRNPUL2Q1KMD3 747 aaKnown RBP10.04□□□□□ -0.8
SPTLC2-204ENST00000556264 SAMD1Q6SPF0 538 aaPredicted RBP10.04□□□□□ -0.8
SPTLC2-204ENST00000556264 U3KPZ7 1027 aaPredicted RBP10.02□□□□□ -0.81
SPTLC2-204ENST00000556264 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
SPTLC2-204ENST00000556264 APLP2Q06481 763 aa9.81□□□□□ -0.84
SPTLC2-204ENST00000556264 SPDYE4A6NLX3 237 aa9.73□□□□□ -0.85
SPTLC2-204ENST00000556264 FBXO3Q9UK99 471 aa9.71□□□□□ -0.86
SPTLC2-204ENST00000556264 MKRN4PQ13434 485 aaPredicted RBP9.69□□□□□ -0.86
SPTLC2-204ENST00000556264 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
SPTLC2-204ENST00000556264 FBLN2P98095 1184 aa9.63□□□□□ -0.87
SPTLC2-204ENST00000556264 PROM2Q8N271 834 aa9.6□□□□□ -0.87
SPTLC2-204ENST00000556264 SPINK5Q9NQ38 1064 aaPredicted RBP9.6□□□□□ -0.87
SPTLC2-204ENST00000556264 POLA2Q14181 598 aa9.59□□□□□ -0.87
SPTLC2-204ENST00000556264 VASPP50552 380 aaPredicted RBP9.57□□□□□ -0.88
SPTLC2-204ENST00000556264 CAPN15O75808 1086 aa9.54□□□□□ -0.88
SPTLC2-204ENST00000556264 IFNLR1Q8IU57 520 aaPredicted RBP9.5□□□□□ -0.89
SPTLC2-204ENST00000556264 RNF39Q9H2S5 420 aa9.5□□□□□ -0.89
SPTLC2-204ENST00000556264 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
SPTLC2-204ENST00000556264 DCAF8L2P0C7V8 631 aa9.43□□□□□ -0.9
SPTLC2-204ENST00000556264 ZBTB12Q9Y330 459 aaPredicted RBP9.42□□□□□ -0.9
SPTLC2-204ENST00000556264 ABCB7O75027 752 aa9.41□□□□□ -0.9
SPTLC2-204ENST00000556264 C1QBPQ07021 282 aaKnown RBP9.41□□□□□ -0.9
SPTLC2-204ENST00000556264 PKD2Q13563 968 aa9.38□□□□□ -0.91
SPTLC2-204ENST00000556264 HAP1P54257 671 aaPredicted RBP9.35□□□□□ -0.91
SPTLC2-204ENST00000556264 KLHL34Q8N239 644 aa9.32□□□□□ -0.92
SPTLC2-204ENST00000556264 ZNF692Q9BU19 519 aaPredicted RBP9.31□□□□□ -0.92
SPTLC2-204ENST00000556264 SPOCK2Q92563 424 aa9.3□□□□□ -0.92
SPTLC2-204ENST00000556264 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
SPTLC2-204ENST00000556264 DSG3P32926 999 aa9.24□□□□□ -0.93
SPTLC2-204ENST00000556264 ECM2O94769 699 aaPredicted RBP9.23□□□□□ -0.93
SPTLC2-204ENST00000556264 OSCARQ8IYS5 282 aa9.23□□□□□ -0.93
SPTLC2-204ENST00000556264 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
SPTLC2-204ENST00000556264 SPDYE2BA6NHP3 402 aa9.21□□□□□ -0.94
SPTLC2-204ENST00000556264 SPDYE6P0CI01 402 aa9.21□□□□□ -0.94
SPTLC2-204ENST00000556264 SPDYE2Q495Y8 402 aa9.21□□□□□ -0.94
SPTLC2-204ENST00000556264 PABPN1Q86U42 306 aaKnown RBP eCLIP9.2□□□□□ -0.94
SPTLC2-204ENST00000556264 SSUH2Q9Y2M2 353 aa9.2□□□□□ -0.94
SPTLC2-204ENST00000556264 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
SPTLC2-204ENST00000556264 MIER1Q8N108 512 aa9.19□□□□□ -0.94
SPTLC2-204ENST00000556264 BBXQ8WY36 941 aaPredicted RBP9.18□□□□□ -0.94
SPTLC2-204ENST00000556264 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.18□□□□□ -0.94
SPTLC2-204ENST00000556264 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
SPTLC2-204ENST00000556264 BCANQ96GW7 911 aa9.15□□□□□ -0.94
SPTLC2-204ENST00000556264 POTEDQ86YR6 584 aa9.14□□□□□ -0.95
SPTLC2-204ENST00000556264 RGL2O15211 777 aa9.13□□□□□ -0.95
SPTLC2-204ENST00000556264 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
SPTLC2-204ENST00000556264 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
SPTLC2-204ENST00000556264 KDM2AQ9Y2K7 1162 aa9.09□□□□□ -0.95
SPTLC2-204ENST00000556264 CIZ1Q9ULV3 898 aaPredicted RBP9.08□□□□□ -0.96
SPTLC2-204ENST00000556264 PLEKHG5O94827 1062 aa9.07□□□□□ -0.96
SPTLC2-204ENST00000556264 PRKCSHP14314 528 aaPredicted RBP9.05□□□□□ -0.96
SPTLC2-204ENST00000556264 SPRYD3Q8NCJ5 442 aa9.04□□□□□ -0.96
SPTLC2-204ENST00000556264 ZBTB47Q9UFB7 747 aaPredicted RBP9.04□□□□□ -0.96
SPTLC2-204ENST00000556264 TAOK2Q9UL54 1235 aa9.03□□□□□ -0.96
SPTLC2-204ENST00000556264 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
SPTLC2-204ENST00000556264 TSHZ2Q9NRE2 1034 aa9□□□□□ -0.97
SPTLC2-204ENST00000556264 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
SPTLC2-204ENST00000556264 TPRNQ4KMQ1 711 aa8.92□□□□□ -0.98
SPTLC2-204ENST00000556264 CACNB1Q02641 598 aaPredicted RBP8.9□□□□□ -0.98
SPTLC2-204ENST00000556264 GSE1Q14687 1217 aa8.9□□□□□ -0.98
SPTLC2-204ENST00000556264 HS6ST3Q8IZP7 471 aa8.9□□□□□ -0.98
SPTLC2-204ENST00000556264 RNF25Q96BH1 459 aaPredicted RBP8.88□□□□□ -0.99
SPTLC2-204ENST00000556264 NUBP1P53384 320 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms